Variant report

Variant	esv3358079
Chromosome Location	chr4:3532979-3535527
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:428)
CpG islands
(count:732)
Chromatin interactive
region (count:15)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:428 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF3	chr4:3534190-3534376	K562	blood:	n/a	chr4:3534199-3534208
2	BACH1	chr4:3534341-3534527	H1-hESC	embryonic stem cell:	n/a	n/a
3	BHLHE40	chr4:3534312-3534557	K562	blood:	n/a	n/a
4	BHLHE40	chr4:3534103-3534388	GM12878	blood:	n/a	chr4:3534255-3534271
5	BHLHE40	chr4:3533592-3533765	HepG2	liver:	n/a	n/a
6	BHLHE40	chr4:3533345-3533603	GM12878	blood:	n/a	n/a
7	BHLHE40	chr4:3533473-3534097	K562	blood:	n/a	n/a
8	BRCA1	chr4:3533960-3534251	Hela-S3	cervix:	n/a	n/a
9	BRCA1	chr4:3534268-3534443	H1-hESC	embryonic stem cell:	n/a	n/a
10	CBX3	chr4:3533901-3534490	K562	blood:	n/a	n/a
11	CCNT2	chr4:3533326-3534821	K562	blood:	n/a	chr4:3534199-3534208
12	CEBPB	chr4:3533116-3533249	HepG2	liver:	n/a	n/a
13	CEBPD	chr4:3533804-3534326	HepG2	liver:	n/a	n/a
14	CHD1	chr4:3533909-3534147	GM12878	blood:	n/a	n/a
15	CHD1	chr4:3533932-3534160	H1-hESC	embryonic stem cell:	n/a	n/a
16	CHD2	chr4:3533933-3534570	GM12878	blood:	n/a	n/a
17	CHD2	chr4:3533878-3534422	Hela-S3	cervix:	n/a	n/a
18	CHD2	chr4:3533971-3534404	K562	blood:	n/a	n/a
19	CHD2	chr4:3533961-3534405	HepG2	liver:	n/a	n/a
20	CHD2	chr4:3534074-3534926	H1-hESC	embryonic stem cell:	n/a	n/a
21	CREB1	chr4:3533827-3534423	GM12878	blood:	n/a	n/a
22	CREB1	chr4:3533924-3534470	A549	lung:	n/a	n/a
23	CTCF	chr4:3533431-3533534	GM12878	blood:	n/a	n/a
24	CTCF	chr4:3533980-3534130	BJ	skin:	n/a	n/a
25	CTCF	chr4:3534061-3534088	Pancreas_OC	pancreas:	n/a	n/a
26	CTCF	chr4:3533940-3534090	SK-N-SH_RA	brain:	n/a	n/a
27	CTCF	chr4:3534244-3534389	Spleen_OC	spleen:	n/a	n/a
28	CTCF	chr4:3534048-3534199	GM12892	blood:	n/a	n/a
29	CTCF	chr4:3533620-3533727	GM12891	blood:	n/a	n/a
30	CTCF	chr4:3533642-3533694	NHEK	skin:	n/a	n/a
31	CTCF	chr4:3533619-3533643	H1-hESC	embryonic stem cell:	n/a	n/a
32	CTCF	chr4:3534020-3534170	GM12865	blood:	n/a	n/a
33	CTCF	chr4:3534060-3534210	SAEC	small airway:	n/a	n/a
34	CTCF	chr4:3534049-3534199	GM12891	blood:	n/a	n/a
35	CTCF	chr4:3534000-3534150	SK-N-SH_RA	brain:	n/a	n/a
36	CTCF	chr4:3533601-3533709	GM19238	blood:	n/a	n/a
37	CTCF	chr4:3534105-3534181	GM19240	blood:	n/a	n/a
38	CTCF	chr4:3534040-3534190	AG04449	skin:	n/a	n/a
39	CTCF	chr4:3533663-3533693	GM19240	blood:	n/a	n/a
40	CTCF	chr4:3534180-3534330	NHEK	skin:	n/a	n/a
41	CTCF	chr4:3533614-3533726	GM12892	blood:	n/a	n/a
42	CTCF	chr4:3533970-3534185	GM12878	blood:	n/a	n/a
43	CTCF	chr4:3533560-3533710	WERI-Rb-1	eye:	n/a	n/a
44	CTCF	chr4:3534071-3534183	GM19239	blood:	n/a	n/a
45	CTCF	chr4:3534117-3534185	NHEK	skin:	n/a	n/a
46	CTCF	chr4:3533645-3533728	GM10266	blood:	n/a	n/a
47	CTCF	chr4:3533040-3533190	GM12872	blood:	n/a	n/a
48	CTCF	chr4:3533760-3533910	GM12871	blood:	n/a	n/a
49	CTCF	chr4:3534062-3534199	Spleen_OC	spleen:	n/a	n/a
50	CTCF	chr4:3533610-3533819	GM19239	blood:	n/a	n/a

(count:732 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:3534149-3534199	PFSK-1	brain:	n/a
2	chr4:3533644-3533694	BJ	skin:	n/a
3	chr4:3534761-3534811	K562	blood:	n/a
4	chr4:3535009-3535059	NH-A	brain:	n/a
5	chr4:3535009-3535059	GM06990	blood:	n/a
6	chr4:3533527-3533577	PrEC	prostate:	n/a
7	chr4:3534424-3534474	HRE	kidney:	n/a
8	chr4:3534286-3534336	MCF-7	breast:	n/a
9	chr4:3534424-3534474	HL-60	blood:	n/a
10	chr4:3534761-3534811	PANC-1	pancreas:	n/a
11	chr4:3533644-3533694	AoSMC	blood vessel:	n/a
12	chr4:3535009-3535059	AG04450	lung:	fetal
13	chr4:3534761-3534811	HAEpiC	amniotic membrane:	n/a
14	chr4:3534424-3534474	Hepatocyte	liver:	n/a
15	chr4:3534308-3534358	U87	brain:	n/a
16	chr4:3534149-3534199	HRPEpiC	eye:	n/a
17	chr4:3533644-3533694	HRPEpiC	eye:	n/a
18	chr4:3534424-3534474	SK-N-SH_RA	brain:	n/a
19	chr4:3534845-3534895	A549	lung:	n/a
20	chr4:3534761-3534811	Caco-2	colon:	n/a
21	chr4:3534308-3534358	NHBE	bronchial:	n/a
22	chr4:3534424-3534474	MCF10A-Er-Src	breast:	n/a
23	chr4:3534286-3534336	HL-60	blood:	n/a
24	chr4:3534424-3534474	ovcar-3	ovarian:	n/a
25	chr4:3534424-3534474	HepG2	liver:	n/a
26	chr4:3534845-3534895	PrEC	prostate:	n/a
27	chr4:3535009-3535059	HEK293	kidney:	embryo
28	chr4:3534286-3534336	HAEpiC	amniotic membrane:	n/a
29	chr4:3535009-3535059	GM19239	blood:	n/a
30	chr4:3534286-3534336	PrEC	prostate:	n/a
31	chr4:3533527-3533577	AG10803	skin:	n/a
32	chr4:3534845-3534895	NH-A	brain:	n/a
33	chr4:3534308-3534358	SK-N-SH_RA	brain:	n/a
34	chr4:3533527-3533577	HEK293	kidney:	embryo
35	chr4:3534761-3534811	ProgFib	skin:	n/a
36	chr4:3533527-3533577	ProgFib	skin:	n/a
37	chr4:3534156-3534206	U87	brain:	n/a
38	chr4:3533644-3533694	HRCEpiC	kidney:	n/a
39	chr4:3534270-3534320	U87	brain:	n/a
40	chr4:3534270-3534320	NH-A	brain:	n/a
41	chr4:3534845-3534895	AG04449	skin:	fetal
42	chr4:3534761-3534811	SK-N-MC	brain:	n/a
43	chr4:3533644-3533694	HIPEpiC	eye:	n/a
44	chr4:3533644-3533694	HCF	heart:	n/a
45	chr4:3534286-3534336	ECC-1	luminal epithelium:	n/a
46	chr4:3533527-3533577	HRE	kidney:	n/a
47	chr4:3534761-3534811	SK-N-SH_RA	brain:	n/a
48	chr4:3534424-3534474	HIPEpiC	eye:	n/a
49	chr4:3534761-3534811	U87	brain:	n/a
50	chr4:3534286-3534336	AG10803	skin:	n/a

(count:15 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:3464468..3466347-chr4:3532849..3534407,2	MCF-7	breast:
2	chr4:3483903..3486449-chr4:3531389..3533464,2	MCF-7	breast:
3	chr4:3484714..3487220-chr4:3532599..3535251,4	MCF-7	breast:
4	chr4:3316773..3319078-chr4:3532523..3535417,2	K562	blood:
5	chr4:3533711..3534459-chr4:37827885..37828819,2	NB4	blood:
6	chr19:10443695..10444576-chr4:3533618..3534349,2	NB4	blood:
7	chr4:3510781..3520846-chr4:3531784..3535437,12	MCF-7	breast:
8	chr21:44846547..44847350-chr4:3533615..3534228,2	Hela-S3	cervix:
9	chr4:3532686..3534345-chr4:3544776..3546772,2	MCF-7	breast:
10	chr4:3532933..3534970-chr4:3765784..3768236,2	MCF-7	breast:
11	chr4:3505996..3508502-chr4:3532623..3535240,2	MCF-7	breast:
12	chr17:8076317..8077036-chr4:3533772..3534554,2	Hela-S3	cervix:
13	chr17:57970401..57971032-chr4:3533463..3534157,2	MCF-7	breast:
14	chr4:3510589..3512915-chr4:3532511..3535420,4	K562	blood:
15	chr4:3485927..3488368-chr4:3533732..3536345,3	MCF-7	breast:

No data

Variant related genes	Relation type
LRPAP1	TF binding region
LRPAP1	CpG island
ENSG00000184160	chromatin interactions
ENSG00000261643	chromatin interactions
ENSG00000142178	chromatin interactions
ENSG00000169299	chromatin interactions
ENSG00000159788	chromatin interactions
ENSG00000268781	chromatin interactions
ENSG00000108443	chromatin interactions
ENSG00000161847	chromatin interactions
ENSG00000200463	chromatin interactions
ENSG00000175920	chromatin interactions
ENSG00000270090	chromatin interactions

Extended variants
information (count: 135 )
Associated
traits (count: 56 )

Variant overlapped rSNPs/rCNVs (count:135 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs558287375	chr4:3533010-3533011	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
2	rs73197160	chr4:3533012-3533013	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs563108456	chr4:3533014-3533015	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
4	rs554557378	chr4:3533026-3533027	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs75793387	chr4:3533047-3533048	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
6	rs185777248	chr4:3533061-3533062	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
7	rs111363167	chr4:3533066-3533067	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs576978737	chr4:3533085-3533086	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs201018219	chr4:3533117-3533118	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
10	rs139500991	chr4:3533118-3533119	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs58965095	chr4:3533119-3533120	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs398063204	chr4:3533121-3533122	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs192345243	chr4:3533156-3533157	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs368126037	chr4:3533165-3533166	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs563025925	chr4:3533180-3533181	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs1741543	chr4:3533219-3533220	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs10031720	chr4:3533231-3533232	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs115100861	chr4:3533242-3533243	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs527716813	chr4:3533246-3533247	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs368798784	chr4:3533284-3533285	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
21	rs570617542	chr4:3533286-3533287	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
22	rs567150917	chr4:3533289-3533290	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
23	rs183841758	chr4:3533294-3533295	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs114059009	chr4:3533311-3533312	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs528841000	chr4:3533313-3533314	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs537623971	chr4:3533331-3533332	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs199804283	chr4:3533334-3533335	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs527723669	chr4:3533372-3533373	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
29	rs144161203	chr4:3533387-3533388	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
30	rs533805108	chr4:3533431-3533432	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs188760523	chr4:3533467-3533468	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
32	rs118046788	chr4:3533484-3533485	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
33	rs145463560	chr4:3533510-3533511	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs556289665	chr4:3533528-3533529	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
35	rs576735749	chr4:3533587-3533588	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
36	rs371489699	chr4:3533619-3533620	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
37	rs535629484	chr4:3533693-3533694	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
38	rs527947778	chr4:3533725-3533726	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
39	rs554024221	chr4:3533734-3533735	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
40	rs541427500	chr4:3533743-3533744	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
41	rs564182389	chr4:3533750-3533751	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
42	rs1730783	chr4:3533760-3533761	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	10 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs549892589	chr4:3533771-3533772	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
44	rs569799928	chr4:3533796-3533797	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
45	rs35004340	chr4:3533832-3533833	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
46	rs531550729	chr4:3533857-3533858	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
47	rs369413209	chr4:3533884-3533885	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
48	rs548053063	chr4:3533892-3533893	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
49	rs1799745	chr4:3533901-3533902	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
50	rs1800484	chr4:3533902-3533903	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:56)

Disease	PMID	Source
Retinitis pigmentosa	18421352	CNVD
Wolf-Hirschhorn syndrome	19259404	CNVD
Bladder cancer	19242612	CNVD
Breast cancer	19242612	CNVD
Congenital anomalies of the kidney and urinary tract	19242612	CNVD
abnormal development	18461090	CNVD
Olfactory neuroblastoma	18408657	CNVD
Wilms tumour	21544195	CNVD
Melanoma	20688739	CNVD
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	21399695	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21509527	CNVD
Ependymoma	20639864	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:470 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:3494200-3533200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr4:3525600-3533000	Weak transcription	A549	lung
3	chr4:3528400-3533000	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr4:3531000-3533000	Enhancers	Primary B cells from cord blood	blood
5	chr4:3531000-3533200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr4:3531200-3533000	Enhancers	Primary T killer memory cells from peripheral blood	blood
7	chr4:3531200-3534000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
8	chr4:3531400-3533000	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr4:3531400-3533000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
10	chr4:3531400-3533000	Enhancers	Liver	Liver
11	chr4:3531400-3533600	Flanking Active TSS	Brain Anterior Caudate	brain
12	chr4:3531600-3533000	Enhancers	Fetal Brain Male	brain
13	chr4:3531600-3533000	Enhancers	Stomach Mucosa	stomach
14	chr4:3531600-3533200	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
15	chr4:3531600-3533600	Flanking Active TSS	Brain Angular Gyrus	brain
16	chr4:3531800-3533000	Enhancers	Primary B cells from peripheral blood	blood
17	chr4:3531800-3533000	Enhancers	Primary T cells fromperipheralblood	blood
18	chr4:3531800-3533000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
19	chr4:3531800-3533200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr4:3531800-3533200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
21	chr4:3531800-3533200	Enhancers	Sigmoid Colon	Sigmoid Colon
22	chr4:3531800-3533600	Flanking Active TSS	Brain Cingulate Gyrus	brain
23	chr4:3532000-3533200	Flanking Active TSS	HepG2	liver
24	chr4:3532000-3533600	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
25	chr4:3532000-3533800	Flanking Active TSS	Brain Germinal Matrix	brain
26	chr4:3532200-3533000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr4:3532200-3533000	Enhancers	Fetal Thymus	thymus
28	chr4:3532200-3533000	Enhancers	NH-A	brain
29	chr4:3532200-3533200	Enhancers	Esophagus	oesophagus
30	chr4:3532200-3533200	Enhancers	Small Intestine	intestine
31	chr4:3532200-3533400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr4:3532200-3533400	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
33	chr4:3532200-3533400	Flanking Active TSS	Right Ventricle	heart
34	chr4:3532200-3533600	Flanking Active TSS	Colonic Mucosa	Colon
35	chr4:3532200-3533600	Flanking Active TSS	HMEC	breast
36	chr4:3532200-3533800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
37	chr4:3532200-3533800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
38	chr4:3532200-3533800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr4:3532400-3533000	Enhancers	Primary hematopoietic stem cells	blood
40	chr4:3532400-3533000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr4:3532400-3533000	Flanking Active TSS	Pancreas	Pancrea
42	chr4:3532400-3533000	Flanking Active TSS	Stomach Smooth Muscle	stomach
43	chr4:3532400-3533200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr4:3532400-3533200	Enhancers	Placenta Amnion	Placenta Amnion
45	chr4:3532400-3533200	Flanking Active TSS	Rectal Smooth Muscle	rectum
46	chr4:3532400-3533200	Flanking Active TSS	NHEK	skin
47	chr4:3532400-3533400	Flanking Active TSS	Brain Hippocampus Middle	brain
48	chr4:3532400-3533600	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
49	chr4:3532400-3533600	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
50	chr4:3532400-3533600	Flanking Active TSS	Colon Smooth Muscle	Colon

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