Variant report

Variant	esv3359860
Chromosome Location	chr3:47019973-47022521
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr3:47021001-47021415	GM12878	blood:	n/a	n/a
2	BCL3	chr3:47020907-47021426	GM12878	blood:	n/a	chr3:47021231-47021244 chr3:47021107-47021116 chr3:47021139-47021152 chr3:47021238-47021247 chr3:47021296-47021305 chr3:47021016-47021029 chr3:47021194-47021203 chr3:47021037-47021050 chr3:47021289-47021302
3	BCLAF1	chr3:47020831-47021453	GM12878	blood:	n/a	chr3:47021231-47021244 chr3:47021107-47021116 chr3:47021139-47021152 chr3:47021238-47021247 chr3:47021296-47021305 chr3:47021016-47021029 chr3:47020873-47020882 chr3:47021194-47021203 chr3:47021037-47021050 chr3:47021289-47021302
4	BCLAF1	chr3:47020811-47021425	GM12878	blood:	n/a	chr3:47021231-47021244 chr3:47021107-47021116 chr3:47021139-47021152 chr3:47021238-47021247 chr3:47021296-47021305 chr3:47021016-47021029 chr3:47020873-47020882 chr3:47021194-47021203 chr3:47021037-47021050 chr3:47021289-47021302
5	BHLHE40	chr3:47020699-47021652	K562	blood:	n/a	n/a
6	BHLHE40	chr3:47020892-47021819	GM12878	blood:	n/a	n/a
7	BRCA1	chr3:47021048-47021270	Hela-S3	cervix:	n/a	n/a
8	BRCA1	chr3:47020606-47020924	H1-hESC	embryonic stem cell:	n/a	n/a
9	CBX3	chr3:47021016-47021331	K562	blood:	n/a	n/a
10	CBX3	chr3:47020391-47021425	K562	blood:	n/a	n/a
11	CCNT2	chr3:47020541-47021692	K562	blood:	n/a	chr3:47020963-47020972
12	CEBPB	chr3:47021275-47021312	H1-hESC	embryonic stem cell:	n/a	n/a
13	CEBPB	chr3:47021004-47021335	Hela-S3	cervix:	n/a	n/a
14	CEBPD	chr3:47020796-47021451	HepG2	liver:	n/a	n/a
15	CHD1	chr3:47021859-47021919	GM12878	blood:	n/a	n/a
16	CHD1	chr3:47020693-47021374	GM12878	blood:	n/a	n/a
17	CHD2	chr3:47021087-47021287	K562	blood:	n/a	n/a
18	CHD2	chr3:47021782-47021935	Hela-S3	cervix:	n/a	n/a
19	CHD2	chr3:47021630-47021777	GM12878	blood:	n/a	n/a
20	CHD2	chr3:47020819-47021244	H1-hESC	embryonic stem cell:	n/a	n/a
21	CHD2	chr3:47020774-47021374	GM12878	blood:	n/a	n/a
22	CHD2	chr3:47020674-47021552	Hela-S3	cervix:	n/a	n/a
23	CREB1	chr3:47020831-47021381	A549	lung:	n/a	n/a
24	CTBP2	chr3:47020488-47021916	H1-hESC	embryonic stem cell:	n/a	n/a
25	CTCF	chr3:47021264-47021352	MCF-7	breast:	n/a	chr3:47021287-47021300
26	CTCF	chr3:47021140-47021290	SK-N-SH_RA	brain:	n/a	n/a
27	CTCF	chr3:47021160-47021310	AG04449	skin:	n/a	chr3:47021287-47021300
28	CTCF	chr3:47021256-47021363	Pancreas_OC	pancreas:	n/a	chr3:47021287-47021300
29	CTCF	chr3:47021253-47021320	GM10248	blood:	n/a	chr3:47021287-47021300
30	CTCF	chr3:47021213-47021334	LNCaP	prostate:	n/a	chr3:47021287-47021300
31	CTCF	chr3:47021180-47021330	SK-N-SH_RA	brain:	n/a	chr3:47021287-47021300
32	CTCF	chr3:47021360-47021510	GM12871	blood:	n/a	n/a
33	CTCF	chr3:47021116-47021398	K562	blood:	n/a	chr3:47021287-47021300
34	CTCF	chr3:47021160-47021310	RPTEC	kidney:	n/a	chr3:47021287-47021300
35	CTCF	chr3:47021260-47021410	GM12878	blood:	n/a	chr3:47021287-47021300
36	CTCF	chr3:47021260-47021410	GM12869	blood:	n/a	chr3:47021287-47021300
37	CTCF	chr3:47021265-47021313	GM20000	blood:	n/a	chr3:47021287-47021300
38	CTCF	chr3:47021185-47021342	MCF-7	breast:	n/a	chr3:47021287-47021300
39	CTCF	chr3:47021180-47021330	GM12873	blood:	n/a	chr3:47021287-47021300
40	CTCF	chr3:47021176-47021375	GM19238	blood:	n/a	chr3:47021287-47021300
41	CTCF	chr3:47021240-47021390	GM12874	blood:	n/a	chr3:47021287-47021300
42	CTCF	chr3:47021244-47021318	GM12878	blood:	n/a	chr3:47021287-47021300
43	CTCF	chr3:47021054-47021478	GM12878	blood:	n/a	chr3:47021287-47021300
44	CTCF	chr3:47021210-47021211	LNCaP	prostate:	n/a	n/a
45	CTCF	chr3:47021195-47021304	SK-N-SH_RA	brain:	n/a	chr3:47021287-47021300
46	CTCF	chr3:47021240-47021390	GM12873	blood:	n/a	chr3:47021287-47021300
47	CTCF	chr3:47021180-47021330	GM12868	blood:	n/a	chr3:47021287-47021300
48	CTCF	chr3:47021151-47021394	IMR90	lung:	n/a	chr3:47021287-47021300
49	CTCF	chr3:47021240-47021390	GM12865	blood:	n/a	chr3:47021287-47021300
50	CTCF	chr3:47021320-47021470	GM12867	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:47021211-47021261	SK-N-SH_RA	brain:	n/a
2	chr3:47021211-47021261	SK-N-SH_RA	brain:	n/a
3	chr3:47021025-47021075	SKMC	muscle:	n/a
4	chr3:47021126-47021176	HRCEpiC	kidney:	n/a
5	chr3:47020973-47021023	HRPEpiC	eye:	n/a
6	chr3:47021148-47021198	SKMC	muscle:	n/a
7	chr3:47020805-47020855	Jurkat	blood:	n/a
8	chr3:47020867-47020917	AG10803	skin:	n/a
9	chr3:47020760-47020810	GM12892	blood:	n/a
10	chr3:47021557-47021607	HRCEpiC	kidney:	n/a
11	chr3:47021557-47021607	PANC-1	pancreas:	n/a
12	chr3:47021557-47021607	GM12891	blood:	n/a
13	chr3:47021211-47021261	HRCEpiC	kidney:	n/a
14	chr3:47021025-47021075	GM12892	blood:	n/a
15	chr3:47020191-47020241	AG04449	skin:	fetal
16	chr3:47021025-47021075	HL-60	blood:	n/a
17	chr3:47020760-47020810	AG04450	lung:	fetal
18	chr3:47020973-47021023	HCT-116	colon:	n/a
19	chr3:47021148-47021198	GM12892	blood:	n/a
20	chr3:47021557-47021607	Hela-S3	cervix:	n/a
21	chr3:47021557-47021607	CMK	blood:	n/a
22	chr3:47021148-47021198	HCPEpiC	choroid plexus:	n/a
23	chr3:47021025-47021075	HRCEpiC	kidney:	n/a
24	chr3:47020867-47020917	HEK293	kidney:	embryo
25	chr3:47021025-47021075	RPTEC	kidney:	n/a
26	chr3:47020805-47020855	HCT-116	colon:	n/a
27	chr3:47020191-47020241	Jurkat	blood:	n/a
28	chr3:47020805-47020855	ECC-1	luminal epithelium:	n/a
29	chr3:47021396-47021446	AoSMC	blood vessel:	n/a
30	chr3:47020805-47020855	Caco-2	colon:	n/a
31	chr3:47021025-47021075	A549	lung:	n/a
32	chr3:47021396-47021446	NHBE	bronchial:	n/a
33	chr3:47020973-47021023	BE2_C	brain:	n/a
34	chr3:47020973-47021023	AoSMC	blood vessel:	n/a
35	chr3:47020919-47020969	GM06990	blood:	n/a
36	chr3:47020760-47020810	AG09319	gingival:	n/a
37	chr3:47021557-47021607	BJ	skin:	n/a
38	chr3:47021025-47021075	HEEpiC	esophagus:	n/a
39	chr3:47020805-47020855	SK-N-SH	brain:	n/a
40	chr3:47020919-47020969	HMEC	breast:	n/a
41	chr3:47020191-47020241	PrEC	prostate:	n/a
42	chr3:47021148-47021198	AG04449	skin:	fetal
43	chr3:47020760-47020810	HRCEpiC	kidney:	n/a
44	chr3:47021557-47021607	MCF-7	breast:	n/a
45	chr3:47020805-47020855	PANC-1	pancreas:	n/a
46	chr3:47021025-47021075	MCF10A-Er-Src	breast:	n/a
47	chr3:47020919-47020969	GM12892	blood:	n/a
48	chr3:47020867-47020917	MCF-7	breast:	n/a
49	chr3:47020191-47020241	BE2_C	brain:	n/a
50	chr3:47020919-47020969	SK-N-SH	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:47020574..47023054-chr3:47051075..47053218,2	MCF-7	breast:
2	chr3:47019120..47020713-chr3:47422216..47424593,2	K562	blood:
3	chr3:47022327..47024798-chr3:47034790..47037154,3	MCF-7	breast:
4	chr3:47019697..47022640-chr3:47324324..47326151,2	K562	blood:
5	chr3:47019689..47022693-chr3:47040941..47043835,3	MCF-7	breast:
6	chr2:75185461..75186274-chr3:47021175..47021935,2	Hela-S3	cervix:

Variant related genes	Relation type
CCDC12	TF binding region
NBEAL2	TF binding region
CCDC12	CpG island
NBEAL2	CpG island
ENSG00000260236	chromatin interactions
ENSG00000160796	chromatin interactions
ENSG00000088727	chromatin interactions
ENSG00000236409	chromatin interactions
ENSG00000114648	chromatin interactions
ENSG00000115350	chromatin interactions
ENSG00000076201	chromatin interactions

Extended variants
information (count: 76 )
Associated
traits (count: 100 )

Variant overlapped rSNPs/rCNVs (count:76 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376476416	chr3:47020013-47020014	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
2	rs182219370	chr3:47020021-47020022	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
3	rs73831452	chr3:47020071-47020072	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
4	rs66564457	chr3:47020072-47020073	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs367801290	chr3:47020112-47020113	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
6	rs546618666	chr3:47020142-47020143	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs13079416	chr3:47020168-47020169	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs555613565	chr3:47020193-47020194	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs151169079	chr3:47020195-47020196	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
10	rs535310486	chr3:47020238-47020239	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
11	rs556698617	chr3:47020239-47020240	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
12	rs377445228	chr3:47020290-47020291	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
13	rs187643916	chr3:47020331-47020332	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
14	rs376049878	chr3:47020345-47020346	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
15	rs192575678	chr3:47020360-47020361	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
16	rs184289134	chr3:47020396-47020397	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
17	rs572787818	chr3:47020398-47020399	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
18	rs540216422	chr3:47020493-47020494	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
19	rs561682356	chr3:47020561-47020562	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
20	rs528953198	chr3:47020576-47020577	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
21	rs539309029	chr3:47020626-47020627	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
22	rs188760522	chr3:47020707-47020708	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
23	rs112825941	chr3:47020740-47020741	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs541548937	chr3:47020743-47020744	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs563033710	chr3:47020770-47020771	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs559851920	chr3:47020790-47020791	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs533687454	chr3:47020802-47020803	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs13062185	chr3:47020835-47020836	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs376503845	chr3:47020920-47020921	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
30	rs567137360	chr3:47020972-47020973	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs527723963	chr3:47020978-47020979	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs549355973	chr3:47021021-47021022	Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs567656721	chr3:47021022-47021023	Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
34	rs13062516	chr3:47021023-47021024	Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs556759951	chr3:47021033-47021034	Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
36	rs370278289	chr3:47021038-47021039	Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
37	rs539234725	chr3:47021047-47021048	Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
38	rs557809681	chr3:47021082-47021083	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs573091456	chr3:47021104-47021105	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
40	rs539853182	chr3:47021109-47021110	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs13062681	chr3:47021124-47021125	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
42	rs573793944	chr3:47021237-47021238	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs544292799	chr3:47021420-47021421	Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
44	rs536171364	chr3:47021458-47021459	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs113932344	chr3:47021510-47021511	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs11277723	chr3:47021519-47021520	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs562545156	chr3:47021533-47021534	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs533599701	chr3:47021601-47021602	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs545573196	chr3:47021735-47021736	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs59321380	chr3:47021780-47021781	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:100)

Disease	PMID	Source
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Kartagener syndrome	16639409	CNVD
Biliary cancer	19435499	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Breast cancer	21509527	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Acute myeloid leukemia	17268525	CNVD
Salivary gland tumor	18059337	CNVD
Gastric cancer	16891809	CNVD
Night blindness	17160897	CNVD
Cancer	17160897	CNVD
Breast cancer	20409316	CNVD
Lung cancer	17297452	CNVD
Multiple myeloma	16616336	CNVD
Effusion lymphoma	18079361	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Urothelial cell carcinoma	18451213	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Melanoma	17363583	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Adrenocortical carcinoma	18281524	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Breast cancer	22522925	CNVD
Medullary thyroid carcinoma	18765511	CNVD

Chromatin state (count:547 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:47017200-47020000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr3:47018200-47020600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr3:47018200-47020600	Weak transcription	Aorta	Aorta
4	chr3:47018200-47020600	Enhancers	Spleen	Spleen
5	chr3:47018400-47020400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr3:47018400-47020400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr3:47018400-47020400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr3:47018400-47020400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
9	chr3:47018400-47020400	Enhancers	Placenta	Placenta
10	chr3:47018400-47020400	Enhancers	Stomach Mucosa	stomach
11	chr3:47018400-47020600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr3:47018400-47020600	Weak transcription	HSMMtube	muscle
13	chr3:47018400-47020600	Enhancers	HUVEC	blood vessel
14	chr3:47018400-47020800	Weak transcription	Ovary	ovary
15	chr3:47018400-47021000	Flanking Active TSS	Dnd41	blood
16	chr3:47018600-47020400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
17	chr3:47018600-47020400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr3:47018600-47020400	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr3:47018600-47020600	Weak transcription	Right Atrium	heart
20	chr3:47018800-47020000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr3:47018800-47020200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
22	chr3:47018800-47020200	Enhancers	Primary B cells from peripheral blood	blood
23	chr3:47018800-47020400	Enhancers	H1 Cell Line	embryonic stem cell
24	chr3:47018800-47020400	Weak transcription	H9 Cell Line	embryonic stem cell
25	chr3:47018800-47020400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr3:47018800-47020400	Weak transcription	HUES48 Cell Line	embryonic stem cell
27	chr3:47018800-47020400	Weak transcription	HUES64 Cell Line	embryonic stem cell
28	chr3:47018800-47020400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr3:47018800-47020400	Enhancers	Primary monocytes fromperipheralblood	blood
30	chr3:47018800-47020400	Enhancers	Primary B cells from cord blood	blood
31	chr3:47018800-47020400	Enhancers	Primary T cells from cord blood	blood
32	chr3:47018800-47020400	Enhancers	Primary T cells fromperipheralblood	blood
33	chr3:47018800-47020400	Enhancers	Primary hematopoietic stem cells	blood
34	chr3:47018800-47020400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
35	chr3:47018800-47020400	Enhancers	Primary T helper naive cells from peripheral blood	blood
36	chr3:47018800-47020400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
37	chr3:47018800-47020400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
38	chr3:47018800-47020400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr3:47018800-47020400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr3:47018800-47020400	Enhancers	Adipose Nuclei	Adipose
41	chr3:47018800-47020400	Enhancers	Liver	Liver
42	chr3:47018800-47020400	Enhancers	Brain Cingulate Gyrus	brain
43	chr3:47018800-47020400	Weak transcription	Brain Germinal Matrix	brain
44	chr3:47018800-47020400	Weak transcription	Brain Hippocampus Middle	brain
45	chr3:47018800-47020400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
46	chr3:47018800-47020400	Enhancers	Colonic Mucosa	Colon
47	chr3:47018800-47020400	Enhancers	Duodenum Smooth Muscle	Duodenum
48	chr3:47018800-47020400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
49	chr3:47018800-47020400	Weak transcription	Fetal Brain Female	brain
50	chr3:47018800-47020400	Enhancers	Fetal Intestine Large	intestine

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