Variant report

Variant esv3362305
Chromosome Location chr1:71594980-71631787
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:71595400-71595800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:71595400-71595800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:71595400-71596800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
4 chr1:71595600-71595800 ZNF genes & repeats Pancreas Pancrea
5 chr1:71599600-71600400 ZNF genes & repeats Liver Liver
6 chr1:71618000-71623800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:71619600-71620600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:71619800-71624400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:71620200-71620400 Enhancers Sigmoid Colon Sigmoid Colon
10 chr1:71620200-71620600 Enhancers Gastric stomach
11 chr1:71620200-71622800 Enhancers Rectal Mucosa Donor 31 rectum
12 chr1:71620400-71621200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:71620600-71620800 ZNF genes & repeats Esophagus oesophagus
14 chr1:71620600-71621000 Weak transcription Gastric stomach
15 chr1:71621000-71621400 Enhancers Gastric stomach
16 chr1:71621200-71621400 Enhancers Lung lung
17 chr1:71621200-71621800 Enhancers Sigmoid Colon Sigmoid Colon
18 chr1:71621200-71623600 Enhancers Fetal Lung lung
19 chr1:71621400-71621800 Enhancers Rectal Mucosa Donor 29 rectum
20 chr1:71621400-71622200 Enhancers Colonic Mucosa Colon
21 chr1:71621400-71623800 Weak transcription Lung lung
22 chr1:71621800-71623600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
23 chr1:71621800-71623800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr1:71622000-71622800 Enhancers Fetal Intestine Small intestine
25 chr1:71622200-71622800 Weak transcription Colonic Mucosa Colon
26 chr1:71622400-71622800 Enhancers Duodenum Smooth Muscle Duodenum
27 chr1:71622800-71623000 Enhancers Colonic Mucosa Colon
28 chr1:71622800-71623200 Enhancers Fetal Intestine Large intestine
29 chr1:71622800-71623200 Weak transcription Fetal Intestine Small intestine
30 chr1:71622800-71623400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
31 chr1:71623200-71624000 Enhancers Fetal Intestine Small intestine
32 chr1:71623400-71623800 Enhancers Rectal Mucosa Donor 31 rectum
33 chr1:71623600-71624200 Enhancers Rectal Mucosa Donor 29 rectum
34 chr1:71623800-71624000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:71623800-71624000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
36 chr1:71623800-71624200 Enhancers Lung lung
37 chr1:71623800-71624200 Enhancers Sigmoid Colon Sigmoid Colon
38 chr1:71624000-71624400 Enhancers Rectal Mucosa Donor 31 rectum
39 chr1:71624200-71625200 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr1:71624400-71625000 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr1:71625200-71625400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:71625200-71625400 Enhancers Rectal Mucosa Donor 31 rectum
43 chr1:71625200-71625400 Enhancers Sigmoid Colon Sigmoid Colon
44 chr1:71625400-71637800 Weak transcription Pancreas Pancrea
45 chr1:71630200-71631000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr1:71631000-71632200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:71631600-71632800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
48 chr1:71631600-71633400 Enhancers ES-I3 Cell Line embryonic stem cell

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