Variant report

Variant	esv3381848
Chromosome Location	chr3:53167712-53172310
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr3:53171909-53172266	K562	blood:	n/a	n/a
2	BCLAF1	chr3:53168676-53169112	GM12878	blood:	n/a	n/a
3	BHLHE40	chr3:53172022-53172159	K562	blood:	n/a	n/a
4	BHLHE40	chr3:53168774-53169042	K562	blood:	n/a	n/a
5	BRCA1	chr3:53168897-53169094	HepG2	liver:	n/a	n/a
6	CEBPB	chr3:53171992-53172241	K562	blood:	n/a	n/a
7	CEBPB	chr3:53171968-53172427	Hela-S3	cervix:	n/a	n/a
8	CEBPB	chr3:53171982-53172243	K562	blood:	n/a	n/a
9	CEBPB	chr3:53171960-53172276	IMR90	lung:	n/a	n/a
10	CHD2	chr3:53168757-53169039	GM12878	blood:	n/a	n/a
11	CHD2	chr3:53168742-53169072	Hela-S3	cervix:	n/a	n/a
12	CTCF	chr3:53168840-53168990	HPF	lung:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
13	CTCF	chr3:53168800-53168950	BJ	skin:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
14	CTCF	chr3:53168840-53168990	AoAF	blood vessel:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
15	CTCF	chr3:53168702-53169030	ECC-1	luminal epithelium:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
16	CTCF	chr3:53168511-53169367	A549	lung:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
17	CTCF	chr3:53168752-53169023	Pancreas_OC	pancreas:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
18	CTCF	chr3:53168840-53168990	HRPEpiC	eye:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
19	CTCF	chr3:53168661-53169119	H1-hESC	embryonic stem cell:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
20	CTCF	chr3:53168820-53168970	HCT-116	colon:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
21	CTCF	chr3:53168820-53168970	HCPEpiC	choroid plexus:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
22	CTCF	chr3:53168840-53168990	HMF	breast:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
23	CTCF	chr3:53168920-53169070	RPTEC	kidney:	n/a	n/a
24	CTCF	chr3:53168820-53168970	AG04449	skin:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
25	CTCF	chr3:53168755-53169035	MCF-7	breast:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
26	CTCF	chr3:53168820-53168970	HBMEC	blood vessel:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
27	CTCF	chr3:53168737-53169030	GM10266	blood:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
28	CTCF	chr3:53168748-53169038	Medullo	brain:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
29	CTCF	chr3:53168380-53168530	WI-38	lung:	n/a	n/a
30	CTCF	chr3:53168734-53169064	NHEK	skin:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
31	CTCF	chr3:53168800-53168950	K562	blood:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
32	CTCF	chr3:53168448-53169409	HCT-116	colon:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
33	CTCF	chr3:53168748-53169050	MCF-7	breast:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
34	CTCF	chr3:53168628-53169140	HepG2	liver:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
35	CTCF	chr3:53168752-53169041	ProgFib	skin:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
36	CTCF	chr3:53168820-53168970	WI-38	lung:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
37	CTCF	chr3:53168820-53168970	GM12868	blood:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
38	CTCF	chr3:53168766-53168990	GM20000	blood:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
39	CTCF	chr3:53168820-53168970	HL-60	blood:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
40	CTCF	chr3:53168540-53168690	AG04449	skin:	n/a	n/a
41	CTCF	chr3:53168629-53169150	MCF-7	breast:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
42	CTCF	chr3:53168754-53169044	Hela-S3	cervix:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
43	CTCF	chr3:53168800-53168950	GM12869	blood:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
44	CTCF	chr3:53168462-53169391	SK-N-SH	brain:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
45	CTCF	chr3:53168820-53168970	HEEpiC	esophagus:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
46	CTCF	chr3:53168820-53168970	HRE	kidney:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
47	CTCF	chr3:53168621-53169209	MCF-7	breast:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
48	CTCF	chr3:53168800-53168950	SK-N-SH_RA	brain:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
49	CTCF	chr3:53168840-53168990	NHEK	skin:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910
50	CTCF	chr3:53168667-53169102	T-47D	breast:	n/a	chr3:53168894-53168912 chr3:53168896-53168917 chr3:53168898-53168905 chr3:53168895-53168911 chr3:53168897-53168910

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:53168665-53168715	HRCEpiC	kidney:	n/a
2	chr3:53168665-53168715	HRCEpiC	kidney:	n/a
3	chr3:53168665-53168715	AoSMC	blood vessel:	n/a
4	chr3:53168665-53168715	HEEpiC	esophagus:	n/a
5	chr3:53168665-53168715	T-47D	breast:	n/a
6	chr3:53168665-53168715	AG04450	lung:	fetal
7	chr3:53168665-53168715	HCM	heart:	n/a
8	chr3:53168665-53168715	GM12892	blood:	n/a
9	chr3:53168665-53168715	NH-A	brain:	n/a
10	chr3:53168665-53168715	MCF-7	breast:	n/a
11	chr3:53168665-53168715	HEK293	kidney:	embryo
12	chr3:53168665-53168715	HCPEpiC	choroid plexus:	n/a
13	chr3:53168665-53168715	U87	brain:	n/a
14	chr3:53168665-53168715	HUVEC	blood vessel:	n/a
15	chr3:53168665-53168715	Caco-2	colon:	n/a
16	chr3:53168665-53168715	HMEC	breast:	n/a
17	chr3:53168665-53168715	CMK	blood:	n/a
18	chr3:53168665-53168715	AG09309	skin:	n/a
19	chr3:53168665-53168715	H1-hESC	embryonic stem cell:	embryo
20	chr3:53168665-53168715	HCF	heart:	n/a
21	chr3:53168665-53168715	PFSK-1	brain:	n/a
22	chr3:53168665-53168715	K562	blood:	n/a
23	chr3:53168665-53168715	HRPEpiC	eye:	n/a
24	chr3:53168665-53168715	PrEC	prostate:	n/a
25	chr3:53168665-53168715	BJ	skin:	n/a
26	chr3:53168665-53168715	Hela-S3	cervix:	n/a
27	chr3:53168665-53168715	Hepatocyte	liver:	n/a
28	chr3:53168665-53168715	PANC-1	pancreas:	n/a
29	chr3:53168665-53168715	Jurkat	blood:	n/a
30	chr3:53168665-53168715	SAEC	small airway:	n/a
31	chr3:53168665-53168715	SK-N-SH_RA	brain:	n/a
32	chr3:53168665-53168715	BE2_C	brain:	n/a
33	chr3:53168665-53168715	IMR90	lung:	fetal
34	chr3:53168665-53168715	NHBE	bronchial:	n/a
35	chr3:53168665-53168715	MCF10A-Er-Src	breast:	n/a
36	chr3:53168665-53168715	RPTEC	kidney:	n/a
37	chr3:53168665-53168715	GM06990	blood:	n/a
38	chr3:53168665-53168715	AG04449	skin:	fetal
39	chr3:53168665-53168715	SKMC	muscle:	n/a
40	chr3:53168665-53168715	SK-N-SH	brain:	n/a
41	chr3:53168665-53168715	NT2-D1	testis:	n/a
42	chr3:53168665-53168715	AG09319	gingival:	n/a
43	chr3:53168665-53168715	LNCaP	prostate:	n/a
44	chr3:53168665-53168715	GM12878	blood:	n/a
45	chr3:53168665-53168715	HCT-116	colon:	n/a
46	chr3:53168665-53168715	HRE	kidney:	n/a
47	chr3:53168665-53168715	HNPCEpiC	eye:	n/a
48	chr3:53168665-53168715	ovcar-3	ovarian:	n/a
49	chr3:53168665-53168715	GM12891	blood:	n/a
50	chr3:53168665-53168715	AG10803	skin:	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:53168393..53169379-chr3:53229728..53230708,4	MCF-7	breast:
2	chr3:53160152..53162531-chr3:53170013..53171718,2	K562	blood:
3	chr3:53168443..53169334-chr3:53229545..53230512,6	MCF-7	breast:
4	chr3:53167017..53169952-chr3:53191720..53194469,2	K562	blood:
5	chr3:53160337..53170540-chr3:53189028..53198029,25	MCF-7	breast:
6	chr3:53163343..53166728-chr3:53167224..53170479,4	MCF-7	breast:
7	chr3:53171302..53172940-chr3:53173107..53174967,2	K562	blood:
8	chr3:53162508..53166145-chr3:53169616..53173018,3	K562	blood:
9	chr3:53171440..53173216-chr3:53176278..53178041,2	K562	blood:
10	chr3:53168501..53169455-chr3:53194754..53195688,3	MCF-7	breast:
11	chr3:53168415..53169413-chr3:53219615..53220145,2	MCF-7	breast:

Variant related genes	Relation type
RFT1	TF binding region
RFT1	CpG island
ENSG00000163933	chromatin interactions
ENSG00000163932	chromatin interactions

Extended variants
information (count: 171 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:171 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs576880852	chr3:53167723-53167724	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs77679588	chr3:53167835-53167836	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs6799837	chr3:53167854-53167855	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs138511987	chr3:53167866-53167867	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs528120175	chr3:53167907-53167908	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs141556933	chr3:53167924-53167925	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs34617391	chr3:53167926-53167927	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs372894575	chr3:53167983-53167984	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs141951511	chr3:53167987-53167988	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs113830734	chr3:53168016-53168017	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs561976523	chr3:53168062-53168063	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs557705990	chr3:53168067-53168068	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs375466014	chr3:53168075-53168076	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs78197497	chr3:53168097-53168098	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs9861744	chr3:53168113-53168114	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs570813181	chr3:53168117-53168118	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs533453919	chr3:53168173-53168174	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs371923773	chr3:53168202-53168203	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs374869053	chr3:53168248-53168249	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs112697876	chr3:53168249-53168250	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs75303641	chr3:53168264-53168265	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs536232406	chr3:53168307-53168308	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs566845219	chr3:53168311-53168312	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs80249718	chr3:53168369-53168370	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs368303572	chr3:53168443-53168444	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs552474818	chr3:53168451-53168452	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs555614758	chr3:53168482-53168483	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs569213426	chr3:53168486-53168487	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs538010755	chr3:53168538-53168539	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs186898552	chr3:53168630-53168631	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs191425424	chr3:53168656-53168657	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs545861273	chr3:53168670-53168671	Weak transcription Enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs552827201	chr3:53168748-53168749	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs183252571	chr3:53168839-53168840	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs541866634	chr3:53168875-53168876	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs79079290	chr3:53168904-53168905	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs569500665	chr3:53168945-53168946	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs149401610	chr3:53168950-53168951	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs376703837	chr3:53168956-53168957	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs554298129	chr3:53168994-53168995	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs544217732	chr3:53169047-53169048	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs564287500	chr3:53169060-53169061	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs533016118	chr3:53169065-53169066	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs547039575	chr3:53169068-53169069	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs566648332	chr3:53169069-53169070	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs529204030	chr3:53169120-53169121	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs548976801	chr3:53169134-53169135	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs144811983	chr3:53169181-53169182	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs79040185	chr3:53169220-53169221	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs75788037	chr3:53169228-53169229	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Septo-optic dysplasia	21572526	CNVD
Biliary cancer	19435499	CNVD
Squamous cell cancer	20885788	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Ventriculomegaly	21325761	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Lung cancer	16618734	CNVD
Neuroblastoma	19686582	CNVD
Renal cell carcinoma	18765545	CNVD
Adrenocortical carcinoma	18281524	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
small cell lung cancer	20016488	CNVD
Schizophrenia	20838587	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:143 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:53164800-53170600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr3:53165000-53168600	Weak transcription	Fetal Muscle Trunk	muscle
3	chr3:53165000-53169800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr3:53165000-53176200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr3:53165000-53176400	Weak transcription	Aorta	Aorta
6	chr3:53165200-53169800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr3:53165400-53168400	Weak transcription	Duodenum Mucosa	Duodenum
8	chr3:53165400-53168600	Weak transcription	Colonic Mucosa	Colon
9	chr3:53165400-53168600	Weak transcription	Fetal Intestine Large	intestine
10	chr3:53165400-53169000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
11	chr3:53165400-53173800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr3:53165400-53176000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr3:53165600-53168400	Weak transcription	Brain Inferior Temporal Lobe	brain
14	chr3:53165600-53168400	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr3:53165600-53168400	Weak transcription	Hela-S3	cervix
16	chr3:53165600-53168400	Enhancers	HepG2	liver
17	chr3:53165600-53168600	Weak transcription	Primary B cells from peripheral blood	blood
18	chr3:53165600-53168600	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr3:53165600-53168600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr3:53165600-53168600	Weak transcription	Colon Smooth Muscle	Colon
21	chr3:53165600-53168600	Weak transcription	Fetal Lung	lung
22	chr3:53165600-53168600	Weak transcription	Lung	lung
23	chr3:53165600-53168600	Weak transcription	Pancreas	Pancrea
24	chr3:53165600-53168600	Weak transcription	Right Ventricle	heart
25	chr3:53165600-53168600	Weak transcription	Stomach Smooth Muscle	stomach
26	chr3:53165600-53168800	Weak transcription	Brain Substantia Nigra	brain
27	chr3:53165600-53168800	Weak transcription	Duodenum Smooth Muscle	Duodenum
28	chr3:53165600-53168800	Weak transcription	Esophagus	oesophagus
29	chr3:53165600-53169200	Weak transcription	Brain Anterior Caudate	brain
30	chr3:53165600-53169600	Weak transcription	Fetal Muscle Leg	muscle
31	chr3:53165600-53170800	Weak transcription	Fetal Thymus	thymus
32	chr3:53165600-53173400	Weak transcription	Gastric	stomach
33	chr3:53165600-53174200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr3:53165600-53174200	Weak transcription	Fetal Heart	heart
35	chr3:53165600-53174200	Weak transcription	Left Ventricle	heart
36	chr3:53165600-53174600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr3:53165600-53177800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
38	chr3:53165600-53181400	Weak transcription	Spleen	Spleen
39	chr3:53165800-53168400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
40	chr3:53165800-53168600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr3:53165800-53168600	Weak transcription	Brain Hippocampus Middle	brain
42	chr3:53165800-53170600	Weak transcription	GM12878-XiMat	blood
43	chr3:53165800-53175400	Weak transcription	Placenta	Placenta
44	chr3:53166200-53168200	Weak transcription	Skeletal Muscle Male	skeletal muscle
45	chr3:53166200-53174600	Weak transcription	Primary B cells from cord blood	blood
46	chr3:53166400-53168600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr3:53166400-53168600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
48	chr3:53166400-53168600	Weak transcription	Right Atrium	heart
49	chr3:53166400-53170200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
50	chr3:53166400-53171200	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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