Variant report

Variant	esv3385861
Chromosome Location	chr15:72704967-72708957
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 57 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:57 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs186916606	chr15:72707220-72707221	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs151290415	chr15:72707262-72707263	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs552008108	chr15:72707269-72707270	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs563938103	chr15:72707290-72707291	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs191056770	chr15:72707309-72707310	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs546254389	chr15:72707314-72707315	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs376456008	chr15:72707355-72707356	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs528238600	chr15:72707381-72707382	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs183228410	chr15:72707474-72707475	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs186666744	chr15:72707509-72707510	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs543026167	chr15:72707534-72707535	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs550407406	chr15:72707564-72707565	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs568663414	chr15:72707595-72707596	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs76931401	chr15:72707655-72707656	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs558003966	chr15:72707677-72707678	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs373282692	chr15:72707710-72707711	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs573032911	chr15:72707736-72707737	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs534234162	chr15:72707754-72707755	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs189562606	chr15:72707773-72707774	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs79389409	chr15:72707788-72707789	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs77288919	chr15:72707789-72707790	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs144263940	chr15:72707801-72707802	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs553150740	chr15:72707884-72707885	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs79245999	chr15:72707888-72707889	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs563085386	chr15:72707918-72707919	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs146570744	chr15:72707951-72707952	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs375321969	chr15:72707952-72707953	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs141253785	chr15:72707954-72707955	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs545397679	chr15:72707962-72707963	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs1816645	chr15:72707991-72707992	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs527961905	chr15:72708023-72708024	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs540262710	chr15:72708045-72708046	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs561343088	chr15:72708066-72708067	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs187868044	chr15:72708082-72708083	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs192867164	chr15:72708165-72708166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs144979394	chr15:72708183-72708184	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs533182807	chr15:72708195-72708196	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs551273675	chr15:72708232-72708233	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs566800272	chr15:72708274-72708275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs533844193	chr15:72708279-72708280	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs375056903	chr15:72708290-72708291	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs567626965	chr15:72708315-72708316	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs538354948	chr15:72708378-72708379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs373277977	chr15:72708440-72708441	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs12916487	chr15:72708480-72708481	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs578127474	chr15:72708524-72708525	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs371245863	chr15:72708614-72708615	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs111380728	chr15:72708627-72708628	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs554062769	chr15:72708691-72708692	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs572745389	chr15:72708696-72708697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Prostate cancer	16573809	CNVD
Autism	17322880	CNVD
Autism	20678247	CNVD
Retinoblastoma	21504564	CNVD
Matthew-Wood syndrome	21085971	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Urothelial cell carcinoma	18451213	CNVD
phobic disorder	16773131	CNVD
Autism	21480499	CNVD
Disorders of sex development	22290220	CNVD
Mental retardation	19951919	CNVD
Mental retardation	16773131	CNVD
T-cell lymphomas	19863542	CNVD
15q24 microdeletion syndrome	22180641	CNVD
15q24 microdeletion syndrome	19921647	CNVD
Disease	22216833	CNVD
Mental retardation	17360722	CNVD
15q24 microdeletion syndrome	22216833	CNVD
15q24 microdeletion syndrome	22283845	CNVD
Developmental delay	17932688	CNVD
craniofacial dysmorphism	17932688	CNVD
digital and genital abnormalities	17932688	CNVD
Mental retardation	17621639	CNVD
Autism	20808228	CNVD
Breast cancer	21364760	CNVD
Urothelial carcinoma	21177765	CNVD
Epilepsy	22083797	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:72707200-72708000	Enhancers	HepG2	liver
2	chr15:72708000-72709800	Weak transcription	HepG2	liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links