No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs707344 |
chrX:57144649-57144650 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs190482284 |
chrX:57144670-57144671 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs182730724 |
chrX:57144676-57144677 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs186405928 |
chrX:57144683-57144684 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs571561195 |
chrX:57144748-57144749 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs191091806 |
chrX:57144791-57144792 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs377148477 |
chrX:57144826-57144827 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs144697603 |
chrX:57144870-57144871 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs112982350 |
chrX:57144885-57144886 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs148688442 |
chrX:57144968-57144969 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs408297 |
chrX:57144970-57144971 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs41307629 |
chrX:57145079-57145080 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs538962042 |
chrX:57145224-57145225 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs187564510 |
chrX:57145327-57145328 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs193297778 |
chrX:57145345-57145346 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs369908446 |
chrX:57145455-57145456 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs183066435 |
chrX:57145530-57145531 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs142244268 |
chrX:57145585-57145586 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs187398309 |
chrX:57145627-57145628 |
Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs436217 |
chrX:57145643-57145644 |
Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs409085 |
chrX:57145996-57145997 |
Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs147850709 |
chrX:57146032-57146033 |
Weak transcription Enhancers Genic enhancers ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs707345 |
chrX:57146035-57146036 |
Weak transcription Enhancers Genic enhancers ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs1736864 |
chrX:57146122-57146123 |
Weak transcription Enhancers Genic enhancers ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs1736863 |
chrX:57146123-57146124 |
Weak transcription Enhancers Genic enhancers ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs1736862 |
chrX:57146129-57146130 |
Weak transcription Enhancers Genic enhancers ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs11547403 |
chrX:57146131-57146132 |
Weak transcription Enhancers Genic enhancers ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs364007 |
chrX:57146205-57146206 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs370748637 |
chrX:57146262-57146263 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs199979060 |
chrX:57146263-57146264 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs201180740 |
chrX:57146865-57146866 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs201872206 |
chrX:57146927-57146928 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs200446826 |
chrX:57146931-57146932 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs201521097 |
chrX:57146945-57146946 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs550578586 |
chrX:57147215-57147216 |
Active TSS ZNF genes & repeats Bivalent/Poised TSS Weak transcription Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs7055254 |
chrX:57147244-57147245 |
Active TSS ZNF genes & repeats Bivalent/Poised TSS Weak transcription Flanking Active TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs568850935 |
chrX:57147681-57147682 |
Active TSS ZNF genes & repeats Bivalent/Poised TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs73494640 |
chrX:57147733-57147734 |
Active TSS ZNF genes & repeats Bivalent/Poised TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs432644 |
chrX:57147883-57147884 |
Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs2071722 |
chrX:57147944-57147945 |
Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
41 |
rs376510480 |
chrX:57148178-57148179 |
Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs369194312 |
chrX:57148301-57148302 |
Active TSS Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs372783829 |
chrX:57148308-57148309 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs184270409 |
chrX:57148323-57148324 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs5960904 |
chrX:57148607-57148608 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
46 |
rs188412875 |
chrX:57148735-57148736 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs192684119 |
chrX:57148845-57148846 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs707346 |
chrX:57148894-57148895 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
49 |
rs184678304 |
chrX:57149011-57149012 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs188991390 |
chrX:57149021-57149022 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|