The 2.0 version of rSNPBase

Variant report

Variant esv3400306
Chromosome Location chr15:43135709-43164903
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:366 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:43054800-43146000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr15:43063400-43136200 Weak transcription Psoas Muscle Psoas
3 chr15:43064800-43150800 Weak transcription HSMM muscle
4 chr15:43067400-43147200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr15:43075200-43143800 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr15:43075400-43135800 Weak transcription HSMMtube muscle
7 chr15:43075600-43150800 Weak transcription Colon Smooth Muscle Colon
8 chr15:43075800-43159200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr15:43089800-43165200 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr15:43094400-43163800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr15:43094600-43150800 Weak transcription Aorta Aorta
12 chr15:43095000-43165000 Weak transcription Spleen Spleen
13 chr15:43095600-43136000 Weak transcription Fetal Brain Female brain
14 chr15:43095800-43139000 Weak transcription Esophagus oesophagus
15 chr15:43096000-43136000 Weak transcription Fetal Muscle Leg muscle
16 chr15:43096200-43136000 Weak transcription Lung lung
17 chr15:43103000-43136000 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr15:43103000-43165400 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr15:43103200-43138400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr15:43103400-43136000 Weak transcription Brain Hippocampus Middle brain
21 chr15:43103400-43173200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr15:43106000-43136000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr15:43106200-43142000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr15:43108200-43136200 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr15:43110800-43136000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr15:43112600-43138000 Weak transcription Rectal Smooth Muscle rectum
27 chr15:43114800-43172000 Weak transcription Pancreas Pancrea
28 chr15:43118200-43139200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr15:43118400-43144400 Weak transcription Gastric stomach
30 chr15:43119200-43136000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr15:43119600-43136200 Weak transcription Fetal Lung lung
32 chr15:43119600-43168200 Weak transcription Stomach Smooth Muscle stomach
33 chr15:43119600-43172600 Weak transcription Brain Inferior Temporal Lobe brain
34 chr15:43119800-43163200 Weak transcription Primary T cells fromperipheralblood blood
35 chr15:43119800-43170200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr15:43120000-43136000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr15:43120000-43142000 Weak transcription Primary B cells from peripheral blood blood
38 chr15:43120000-43151000 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr15:43120200-43135800 Weak transcription Fetal Intestine Large intestine
40 chr15:43120600-43141800 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr15:43122000-43136000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr15:43125200-43136000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr15:43125200-43151400 Weak transcription Placenta Amnion Placenta Amnion
44 chr15:43125400-43173600 Weak transcription Hela-S3 cervix
45 chr15:43125800-43136200 Weak transcription NHEK skin
46 chr15:43126000-43136200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr15:43126000-43136200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr15:43126000-43150600 Weak transcription HMEC breast
49 chr15:43128400-43136200 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr15:43131000-43136200 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015