Variant report

Variant	esv3400340
Chromosome Location	chr3:179369683-179372231
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:712)
CpG islands
(count:488)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:712 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:179371257-179371483	HepG2	liver:	n/a	n/a
2	ARID3A	chr3:179370296-179370931	HepG2	liver:	n/a	n/a
3	ATF2	chr3:179370117-179370590	GM12878	blood:	n/a	n/a
4	ATF2	chr3:179370284-179370675	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:179370421-179370859	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr3:179372078-179372421	H1-hESC	embryonic stem cell:	n/a	n/a
7	BCLAF1	chr3:179370991-179371483	GM12878	blood:	n/a	n/a
8	BHLHE40	chr3:179371075-179371392	A549	lung:	n/a	chr3:179371226-179371235
9	BHLHE40	chr3:179370984-179371521	HepG2	liver:	n/a	chr3:179371226-179371235
10	BHLHE40	chr3:179371011-179371553	K562	blood:	n/a	chr3:179371226-179371235
11	BHLHE40	chr3:179370427-179370742	HepG2	liver:	n/a	n/a
12	BHLHE40	chr3:179372013-179372247	GM12878	blood:	n/a	n/a
13	BHLHE40	chr3:179371159-179371433	HepG2	liver:	n/a	chr3:179371226-179371235
14	BHLHE40	chr3:179370265-179371702	GM12878	blood:	n/a	chr3:179371226-179371235 chr3:179370781-179370797 chr3:179370749-179370765
15	BRCA1	chr3:179371251-179371419	GM12878	blood:	n/a	n/a
16	BRCA1	chr3:179370469-179370617	H1-hESC	embryonic stem cell:	n/a	n/a
17	BRCA1	chr3:179370218-179370651	Hela-S3	cervix:	n/a	n/a
18	BRCA1	chr3:179370402-179370471	HepG2	liver:	n/a	n/a
19	CBX3	chr3:179371014-179371557	K562	blood:	n/a	n/a
20	CCNT2	chr3:179370419-179370836	K562	blood:	n/a	chr3:179370763-179370772
21	CCNT2	chr3:179371058-179371392	K562	blood:	n/a	n/a
22	CEBPB	chr3:179371674-179371888	H1-hESC	embryonic stem cell:	n/a	n/a
23	CEBPB	chr3:179371186-179371263	H1-hESC	embryonic stem cell:	n/a	n/a
24	CEBPB	chr3:179370243-179370639	Hela-S3	cervix:	n/a	n/a
25	CEBPB	chr3:179371040-179372602	Hela-S3	cervix:	n/a	chr3:179372296-179372313
26	CEBPD	chr3:179370482-179370921	HepG2	liver:	n/a	n/a
27	CHD1	chr3:179372032-179372314	GM12878	blood:	n/a	n/a
28	CHD1	chr3:179369863-179372616	IMR90	lung:	n/a	n/a
29	CHD1	chr3:179372005-179372467	H1-hESC	embryonic stem cell:	n/a	n/a
30	CHD1	chr3:179370991-179371641	GM12878	blood:	n/a	n/a
31	CHD1	chr3:179371037-179371761	H1-hESC	embryonic stem cell:	n/a	n/a
32	CHD1	chr3:179370160-179370465	H1-hESC	embryonic stem cell:	n/a	n/a
33	CHD2	chr3:179371489-179371647	HepG2	liver:	n/a	n/a
34	CHD2	chr3:179370994-179371562	GM12878	blood:	n/a	n/a
35	CHD2	chr3:179370103-179371714	Hela-S3	cervix:	n/a	n/a
36	CHD2	chr3:179370467-179370543	K562	blood:	n/a	n/a
37	CHD2	chr3:179371196-179371525	H1-hESC	embryonic stem cell:	n/a	n/a
38	CHD2	chr3:179370420-179370665	H1-hESC	embryonic stem cell:	n/a	n/a
39	CREB1	chr3:179370228-179370880	GM12878	blood:	n/a	chr3:179370465-179370478
40	CREB1	chr3:179370555-179370996	H1-hESC	embryonic stem cell:	n/a	n/a
41	CREB1	chr3:179370352-179370896	A549	lung:	n/a	chr3:179370465-179370478
42	CREB1	chr3:179370194-179371707	HepG2	liver:	n/a	chr3:179370465-179370478
43	CTCF	chr3:179371260-179371410	SK-N-SH_RA	brain:	n/a	n/a
44	CTCF	chr3:179370721-179370815	GM12878	blood:	n/a	n/a
45	CTCF	chr3:179371520-179371670	AG04450	lung:	n/a	n/a
46	CTCF	chr3:179370704-179370803	GM13977	blood:	n/a	n/a
47	CTCF	chr3:179371220-179371370	AG10803	skin:	n/a	n/a
48	CTCF	chr3:179370680-179370830	HepG2	liver:	n/a	n/a
49	CTCF	chr3:179370600-179370750	GM12872	blood:	n/a	n/a
50	CTCF	chr3:179371203-179371357	MCF-7	breast:	n/a	n/a

(count:488 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:179371114-179371164	MCF10A-Er-Src	breast:	n/a
2	chr3:179371510-179371560	MCF10A-Er-Src	breast:	n/a
3	chr3:179370779-179370829	GM12878	blood:	n/a
4	chr3:179370779-179370829	PFSK-1	brain:	n/a
5	chr3:179370821-179370871	U87	brain:	n/a
6	chr3:179370821-179370871	NH-A	brain:	n/a
7	chr3:179370420-179370470	HMEC	breast:	n/a
8	chr3:179370471-179370521	AG09319	gingival:	n/a
9	chr3:179370779-179370829	AoSMC	blood vessel:	n/a
10	chr3:179370821-179370871	BJ	skin:	n/a
11	chr3:179370420-179370470	HPAEpiC	pulmonary alveolar:	n/a
12	chr3:179370824-179370874	ProgFib	skin:	n/a
13	chr3:179370779-179370829	Jurkat	blood:	n/a
14	chr3:179370471-179370521	GM12891	blood:	n/a
15	chr3:179370779-179370829	Caco-2	colon:	n/a
16	chr3:179370779-179370829	HAEpiC	amniotic membrane:	n/a
17	chr3:179370824-179370874	LNCaP	prostate:	n/a
18	chr3:179371114-179371164	NH-A	brain:	n/a
19	chr3:179371510-179371560	GM12878	blood:	n/a
20	chr3:179370821-179370871	SK-N-SH_RA	brain:	n/a
21	chr3:179371510-179371560	HCT-116	colon:	n/a
22	chr3:179370420-179370470	AG09319	gingival:	n/a
23	chr3:179370465-179370515	NT2-D1	testis:	n/a
24	chr3:179370824-179370874	HUVEC	blood vessel:	n/a
25	chr3:179370821-179370871	HepG2	liver:	n/a
26	chr3:179370779-179370829	SK-N-SH_RA	brain:	n/a
27	chr3:179371114-179371164	AoSMC	blood vessel:	n/a
28	chr3:179370821-179370871	PrEC	prostate:	n/a
29	chr3:179371114-179371164	HL-60	blood:	n/a
30	chr3:179371510-179371560	SAEC	small airway:	n/a
31	chr3:179370471-179370521	AoSMC	blood vessel:	n/a
32	chr3:179370821-179370871	SAEC	small airway:	n/a
33	chr3:179370824-179370874	HCT-116	colon:	n/a
34	chr3:179370779-179370829	GM19239	blood:	n/a
35	chr3:179371114-179371164	HPAEpiC	pulmonary alveolar:	n/a
36	chr3:179370471-179370521	GM12892	blood:	n/a
37	chr3:179370471-179370521	AG10803	skin:	n/a
38	chr3:179371114-179371164	HRE	kidney:	n/a
39	chr3:179370779-179370829	HCPEpiC	choroid plexus:	n/a
40	chr3:179371510-179371560	HRCEpiC	kidney:	n/a
41	chr3:179370465-179370515	NHDF-neo	bronchial:	n/a
42	chr3:179370821-179370871	NHDF-neo	bronchial:	n/a
43	chr3:179370779-179370829	AG09319	gingival:	n/a
44	chr3:179370824-179370874	HRCEpiC	kidney:	n/a
45	chr3:179370465-179370515	IMR90	lung:	fetal
46	chr3:179370420-179370470	PANC-1	pancreas:	n/a
47	chr3:179371510-179371560	A549	lung:	n/a
48	chr3:179371510-179371560	K562	blood:	n/a
49	chr3:179370779-179370829	HL-60	blood:	n/a
50	chr3:179370779-179370829	H1-hESC	embryonic stem cell:	embryo

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:172467247..172468788-chr3:179370430..179372469,2	MCF-7	breast:
2	chr3:179371770..179374007-chr3:179377040..179379599,2	K562	blood:
3	chr3:179062475..179065895-chr3:179368714..179370965,3	MCF-7	breast:
4	chr3:179279862..179282588-chr3:179370567..179372088,2	MCF-7	breast:
5	chr3:179369074..179371005-chr9:91932390..91934959,2	MCF-7	breast:
6	chr3:179279377..179281917-chr3:179370859..179372461,2	K562	blood:
7	chr3:179368583..179370477-chr3:179391121..179393841,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000243977	TF binding region
USP13	TF binding region
ENSG00000243977	CpG island
USP13	CpG island
ENSG00000136518	chromatin interactions
ENSG00000114346	chromatin interactions
ENSG00000187742	chromatin interactions
ENSG00000171109	chromatin interactions

Extended variants
information (count: 116 )
Associated
traits (count: 73 )

Variant overlapped rSNPs/rCNVs (count:116 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs538369359	chr3:179369683-179369684	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
2	rs555097587	chr3:179369691-179369692	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs145588307	chr3:179369698-179369699	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs75122673	chr3:179369714-179369715	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs144280051	chr3:179369733-179369734	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs78924424	chr3:179369741-179369742	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs545411871	chr3:179369748-179369749	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs186978738	chr3:179369763-179369764	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs79318847	chr3:179369779-179369780	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs74990816	chr3:179369812-179369813	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs191244401	chr3:179369813-179369814	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs115415232	chr3:179369833-179369834	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs574044220	chr3:179369860-179369861	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs530327779	chr3:179369920-179369921	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs13085032	chr3:179369942-179369943	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs13085303	chr3:179369961-179369962	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs13065034	chr3:179369962-179369963	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs13065035	chr3:179369967-179369968	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs13084906	chr3:179369970-179369971	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs371738428	chr3:179369997-179369998	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs13065067	chr3:179370014-179370015	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs13085070	chr3:179370015-179370016	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs13085079	chr3:179370034-179370035	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs13085080	chr3:179370038-179370039	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs9870194	chr3:179370059-179370060	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs532726360	chr3:179370066-179370067	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs13085212	chr3:179370098-179370099	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs13065229	chr3:179370100-179370101	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs13085536	chr3:179370123-179370124	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs143410176	chr3:179370144-179370145	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs371070156	chr3:179370186-179370187	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs113570177	chr3:179370191-179370192	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs538230358	chr3:179370201-179370202	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs183408353	chr3:179370263-179370264	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs113771858	chr3:179370288-179370289	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs201413474	chr3:179370298-179370299	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs9870283	chr3:179370310-179370311	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs534010876	chr3:179370364-179370365	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs553654434	chr3:179370366-179370367	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs115713539	chr3:179370415-179370416	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs76743370	chr3:179370437-179370438	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
42	rs556038643	chr3:179370505-179370506	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
43	rs151200653	chr3:179370508-179370509	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
44	rs187756168	chr3:179370521-179370522	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
45	rs9871045	chr3:179370599-179370600	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs561826326	chr3:179370643-179370644	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs369895968	chr3:179370649-179370650	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs527370183	chr3:179370720-179370721	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs541103197	chr3:179370725-179370726	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs560550942	chr3:179370780-179370781	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:73)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	22032731	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	21115979	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	16608533	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-small cell lung cancer	19010865	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	21785460	CNVD
Breast cancer	17133270	CNVD
epilepsy	18472482	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Myxofibrosarcoma	16751306	CNVD
Parkinson disease	21907011	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	21364760	CNVD
Anaplastic thyroid cancer	17989125	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Ovarian cancer	18208621	CNVD
Thyroid cancer	17317825	CNVD
Thyroid cancer	17989125	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Breast cancer	21806811	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	16751803	CNVD
abnormal development	18461090	CNVD
lymphocytic leukemia	21291569	CNVD
Autism	19653912	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	17217626	CNVD
Adenocarcinoma	19607727	CNVD
Squamous cell cancer	19607727	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Prostate cancer	18632612	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:369 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:179362600-179369800	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr3:179363000-179369800	Weak transcription	Liver	Liver
3	chr3:179363000-179369800	Weak transcription	GM12878-XiMat	blood
4	chr3:179367400-179369800	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr3:179367600-179369800	Weak transcription	HepG2	liver
6	chr3:179367800-179369800	Weak transcription	A549	lung
7	chr3:179367800-179369800	Weak transcription	Hela-S3	cervix
8	chr3:179367800-179370200	Weak transcription	Placenta	Placenta
9	chr3:179368600-179369800	Weak transcription	Primary T helper cells PMA-I stimulated	--
10	chr3:179369400-179369800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr3:179369600-179369800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr3:179369600-179369800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr3:179369600-179369800	Enhancers	HUES48 Cell Line	embryonic stem cell
14	chr3:179369600-179369800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
15	chr3:179369600-179369800	Enhancers	Primary hematopoietic stem cells short term culture	blood
16	chr3:179369600-179369800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr3:179369600-179369800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr3:179369600-179369800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr3:179369600-179369800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr3:179369600-179369800	Enhancers	Brain Anterior Caudate	brain
21	chr3:179369600-179369800	Enhancers	Brain Germinal Matrix	brain
22	chr3:179369600-179369800	Enhancers	Fetal Thymus	thymus
23	chr3:179369600-179369800	Enhancers	Dnd41	blood
24	chr3:179369600-179369800	Enhancers	NH-A	brain
25	chr3:179369600-179369800	Enhancers	NHEK	skin
26	chr3:179369600-179369800	Enhancers	NHLF	lung
27	chr3:179369600-179369800	Enhancers	Osteobl	bone
28	chr3:179369600-179370000	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
29	chr3:179369600-179370000	Enhancers	Breast Myoepithelial Primary Cells	Breast
30	chr3:179369600-179370000	Enhancers	Cortex derived primary cultured neurospheres	brain
31	chr3:179369600-179370000	Enhancers	Brain Hippocampus Middle	brain
32	chr3:179369600-179370000	Enhancers	Fetal Muscle Leg	muscle
33	chr3:179369600-179370400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr3:179369600-179372400	Active TSS	NHDF-Ad	bronchial
35	chr3:179369600-179372600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
36	chr3:179369800-179370000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr3:179369800-179370000	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr3:179369800-179370000	Flanking Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr3:179369800-179370000	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
40	chr3:179369800-179370000	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
41	chr3:179369800-179370000	Flanking Active TSS	Primary T cells from cord blood	blood
42	chr3:179369800-179370000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
43	chr3:179369800-179370000	Enhancers	Primary T helper cells PMA-I stimulated	--
44	chr3:179369800-179370000	Enhancers	Primary T helper cells fromperipheralblood	blood
45	chr3:179369800-179370000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr3:179369800-179370000	Enhancers	Liver	Liver
47	chr3:179369800-179370000	Enhancers	Brain Angular Gyrus	brain
48	chr3:179369800-179370000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
49	chr3:179369800-179370000	Enhancers	Fetal Heart	heart
50	chr3:179369800-179370000	Enhancers	Pancreatic Islets	Pancreatic Islet

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