Variant report

Variant esv3404444
Chromosome Location chr5:41701527-41744979
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:397 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:41707400-41708000 Enhancers HSMMtube muscle
2 chr5:41707400-41708800 Enhancers Osteobl bone
3 chr5:41707600-41708800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr5:41708000-41708400 Active TSS HSMMtube muscle
5 chr5:41708000-41708800 Enhancers Muscle Satellite Cultured Cells --
6 chr5:41708200-41708600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr5:41708400-41708800 Enhancers HUES6 Cell Line embryonic stem cell
8 chr5:41708400-41708800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
9 chr5:41708400-41708800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
10 chr5:41708400-41708800 Flanking Active TSS HSMMtube muscle
11 chr5:41708400-41709000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr5:41708400-41709000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr5:41708600-41709000 Enhancers HSMM muscle
14 chr5:41708800-41709000 Enhancers HSMMtube muscle
15 chr5:41718200-41718400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr5:41718400-41718800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr5:41721000-41722000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr5:41721200-41722200 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr5:41721800-41722000 Enhancers HSMMtube muscle
20 chr5:41722000-41736800 Weak transcription HSMMtube muscle
21 chr5:41722600-41722800 Enhancers Right Atrium heart
22 chr5:41722600-41723000 Enhancers Fetal Muscle Leg muscle
23 chr5:41722600-41723000 Enhancers Ovary ovary
24 chr5:41722800-41723000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr5:41722800-41723000 ZNF genes & repeats Aorta Aorta
26 chr5:41722800-41723000 Enhancers GM12878-XiMat blood
27 chr5:41723000-41724800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr5:41723000-41735800 Weak transcription GM12878-XiMat blood
29 chr5:41723000-41739200 Weak transcription Aorta Aorta
30 chr5:41725200-41725400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr5:41725200-41725400 Enhancers Right Ventricle heart
32 chr5:41725400-41725600 Enhancers Fetal Kidney kidney
33 chr5:41725400-41728400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr5:41725400-41739200 Weak transcription Right Ventricle heart
35 chr5:41725600-41747400 Weak transcription Fetal Kidney kidney
36 chr5:41726000-41726600 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr5:41726600-41736000 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr5:41726600-41736000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr5:41726800-41728400 Weak transcription Primary T cells from cord blood blood
40 chr5:41727000-41730600 Weak transcription Left Ventricle heart
41 chr5:41727200-41727400 Enhancers Fetal Brain Female brain
42 chr5:41727200-41728800 Weak transcription Fetal Thymus thymus
43 chr5:41727200-41730600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr5:41727200-41735200 Weak transcription Stomach Smooth Muscle stomach
45 chr5:41727200-41735800 Weak transcription Lung lung
46 chr5:41727200-41738400 Weak transcription Thymus Thymus
47 chr5:41727400-41729000 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr5:41727400-41729000 Weak transcription Dnd41 blood
49 chr5:41727400-41730400 Weak transcription Primary T cells fromperipheralblood blood
50 chr5:41727400-41730400 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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