Variant report

Variant	esv3405575
Chromosome Location	chr11:32776326-32779099
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 55 )
Associated
traits (count: 78 )

Variant overlapped rSNPs/rCNVs (count:55 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs71063757	chr11:32777853-32777854	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs57646929	chr11:32777889-32777890	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs186744399	chr11:32777899-32777900	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs61447895	chr11:32777915-32777916	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs7108961	chr11:32777927-32777928	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs7108963	chr11:32777929-32777930	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs191212683	chr11:32777939-32777940	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs7108970	chr11:32777941-32777942	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs12280532	chr11:32777943-32777944	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs111235758	chr11:32777947-32777948	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs35070777	chr11:32777952-32777953	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs7108980	chr11:32777953-32777954	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs7108981	chr11:32777955-32777956	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs200326160	chr11:32777956-32777957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs201334002	chr11:32777957-32777958	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs202190822	chr11:32777958-32777959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs538926857	chr11:32777964-32777965	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs12293774	chr11:32777967-32777968	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
19	rs199613568	chr11:32777968-32777969	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs12280587	chr11:32777969-32777970	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs35633359	chr11:32777977-32777978	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs573807075	chr11:32778001-32778002	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs35506735	chr11:32778042-32778043	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs577169182	chr11:32778083-32778084	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs113958998	chr11:32778156-32778157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs539952508	chr11:32778187-32778188	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs185320578	chr11:32778211-32778212	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs559859535	chr11:32778220-32778221	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs573400741	chr11:32778221-32778222	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs542836361	chr11:32778312-32778313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs189847539	chr11:32778317-32778318	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs562528855	chr11:32778343-32778344	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs531649566	chr11:32778380-32778381	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs551359526	chr11:32778416-32778417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs111922324	chr11:32778458-32778459	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs527727471	chr11:32778468-32778469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs542739603	chr11:32778567-32778568	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs182472208	chr11:32778585-32778586	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs112583632	chr11:32778617-32778618	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs567788242	chr11:32778618-32778619	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs375754879	chr11:32778623-32778624	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs575134812	chr11:32778635-32778636	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs536726671	chr11:32778664-32778665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs10835967	chr11:32778732-32778733	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs570119151	chr11:32778775-32778776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs373204486	chr11:32778796-32778797	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs539320344	chr11:32778832-32778833	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs554280645	chr11:32778881-32778882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs186371424	chr11:32778930-32778931	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs572399980	chr11:32778970-32778971	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:78)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	22286061	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32777800-32790200	Weak transcription	Liver	Liver

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