Variant report

Variant	esv3405929
Chromosome Location	chr1:228869854-228872702
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:447)
CpG islands
(count:977)
Chromatin interactive
region (count:6)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:447 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:228870953-228871091	HepG2	liver:	n/a	n/a
2	ATF3	chr1:228870920-228871175	HepG2	liver:	n/a	n/a
3	BACH1	chr1:228871749-228871930	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr1:228870687-228871426	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr1:228872238-228872470	H1-hESC	embryonic stem cell:	n/a	n/a
6	BHLHE40	chr1:228870845-228871432	HepG2	liver:	n/a	chr1:228871280-228871296 chr1:228871384-228871400
7	CEBPB	chr1:228870980-228871207	Hela-S3	cervix:	n/a	n/a
8	CHD1	chr1:228872272-228872405	H1-hESC	embryonic stem cell:	n/a	n/a
9	CHD2	chr1:228871242-228871318	HepG2	liver:	n/a	n/a
10	CHD2	chr1:228870901-228870910	HepG2	liver:	n/a	n/a
11	CHD2	chr1:228870824-228871371	Hela-S3	cervix:	n/a	n/a
12	CREB1	chr1:228870826-228871502	A549	lung:	n/a	n/a
13	CTBP2	chr1:228870854-228871527	H1-hESC	embryonic stem cell:	n/a	n/a
14	CTCF	chr1:228871140-228871290	BJ	skin:	n/a	n/a
15	CTCF	chr1:228870980-228871130	AG10803	skin:	n/a	n/a
16	CTCF	chr1:228870764-228870833	LNCaP	prostate:	n/a	chr1:228870813-228870831 chr1:228870816-228870829
17	CTCF	chr1:228871380-228871530	SK-N-SH_RA	brain:	n/a	n/a
18	CTCF	chr1:228870980-228871130	BE2_C	brain:	n/a	n/a
19	CTCF	chr1:228870960-228871110	A549	lung:	n/a	n/a
20	CTCF	chr1:228871020-228871170	HPAF	blood vessel:	n/a	n/a
21	CTCF	chr1:228871340-228871552	GM19239	blood:	n/a	n/a
22	CTCF	chr1:228871405-228871410	MCF-7	breast:	n/a	n/a
23	CTCF	chr1:228870990-228871188	MCF-7	breast:	n/a	n/a
24	CTCF	chr1:228870963-228871227	NHEK	skin:	n/a	n/a
25	CTCF	chr1:228870785-228870894	LNCaP	prostate:	n/a	chr1:228870813-228870831 chr1:228870816-228870829
26	CTCF	chr1:228870935-228871228	A549	lung:	n/a	n/a
27	CTCF	chr1:228870740-228870890	HRE	kidney:	n/a	chr1:228870813-228870831 chr1:228870816-228870829
28	CTCF	chr1:228870883-228871298	H1-hESC	embryonic stem cell:	n/a	n/a
29	CTCF	chr1:228871000-228871150	HUVEC	blood vessel:	n/a	n/a
30	CTCF	chr1:228870700-228870850	AoAF	blood vessel:	n/a	chr1:228870813-228870831 chr1:228870816-228870829
31	CTCF	chr1:228871018-228871130	GM12878	blood:	n/a	n/a
32	CTCF	chr1:228871000-228871150	SK-N-SH_RA	brain:	n/a	n/a
33	CTCF	chr1:228871000-228871150	AG09309	skin:	n/a	n/a
34	CTCF	chr1:228870980-228871130	GM12866	blood:	n/a	n/a
35	CTCF	chr1:228870929-228871386	MCF-7	breast:	n/a	n/a
36	CTCF	chr1:228870980-228871130	GM12873	blood:	n/a	n/a
37	CTCF	chr1:228870980-228871130	NHDF-neo	bronchial:	n/a	n/a
38	CTCF	chr1:228870745-228870885	GM19239	blood:	n/a	chr1:228870813-228870831 chr1:228870816-228870829
39	CTCF	chr1:228871040-228871190	GM12874	blood:	n/a	n/a
40	CTCF	chr1:228871511-228871531	H1-hESC	embryonic stem cell:	n/a	n/a
41	CTCF	chr1:228870908-228871218	K562	blood:	n/a	n/a
42	CTCF	chr1:228871040-228871190	HFF	foreskin:	n/a	n/a
43	CTCF	chr1:228870980-228871130	GM12868	blood:	n/a	n/a
44	CTCF	chr1:228870960-228871110	HCT-116	colon:	n/a	n/a
45	CTCF	chr1:228870727-228871253	Kidney_OC	kidney:	n/a	chr1:228870813-228870831 chr1:228870816-228870829
46	CTCF	chr1:228870715-228871265	A549	lung:	n/a	chr1:228870813-228870831 chr1:228870816-228870829
47	CTCF	chr1:228870956-228871260	LNCaP	prostate:	n/a	n/a
48	CTCF	chr1:228870760-228870910	AG04449	skin:	n/a	chr1:228870813-228870831 chr1:228870816-228870829
49	CTCF	chr1:228871006-228871171	GM12892	blood:	n/a	n/a
50	CTCF	chr1:228871400-228871550	HCM	heart:	n/a	n/a

(count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:228870637-228870687	PANC-1	pancreas:	n/a
2	chr1:228870637-228870687	PANC-1	pancreas:	n/a
3	chr1:228870811-228870861	GM19239	blood:	n/a
4	chr1:228872121-228872171	AG04450	lung:	fetal
5	chr1:228870885-228870935	H1-hESC	embryonic stem cell:	embryo
6	chr1:228871311-228871361	HCT-116	colon:	n/a
7	chr1:228870454-228870504	MCF-7	breast:	n/a
8	chr1:228871665-228871715	NHBE	bronchial:	n/a
9	chr1:228870454-228870504	ProgFib	skin:	n/a
10	chr1:228870454-228870504	HPAEpiC	pulmonary alveolar:	n/a
11	chr1:228872121-228872171	HEK293	kidney:	embryo
12	chr1:228871301-228871351	PFSK-1	brain:	n/a
13	chr1:228871303-228871353	PrEC	prostate:	n/a
14	chr1:228871301-228871351	RPTEC	kidney:	n/a
15	chr1:228870867-228870917	BJ	skin:	n/a
16	chr1:228871301-228871351	SAEC	small airway:	n/a
17	chr1:228870709-228870759	SK-N-SH	brain:	n/a
18	chr1:228871677-228871727	LNCaP	prostate:	n/a
19	chr1:228872121-228872171	BE2_C	brain:	n/a
20	chr1:228871301-228871351	PrEC	prostate:	n/a
21	chr1:228871665-228871715	T-47D	breast:	n/a
22	chr1:228870454-228870504	ovcar-3	ovarian:	n/a
23	chr1:228871677-228871727	PrEC	prostate:	n/a
24	chr1:228872121-228872171	U87	brain:	n/a
25	chr1:228870885-228870935	HMEC	breast:	n/a
26	chr1:228871303-228871353	ProgFib	skin:	n/a
27	chr1:228872121-228872171	LNCaP	prostate:	n/a
28	chr1:228872246-228872296	HCM	heart:	n/a
29	chr1:228872121-228872171	HepG2	liver:	n/a
30	chr1:228870709-228870759	SAEC	small airway:	n/a
31	chr1:228870629-228870679	ProgFib	skin:	n/a
32	chr1:228871665-228871715	BE2_C	brain:	n/a
33	chr1:228871311-228871361	AG10803	skin:	n/a
34	chr1:228870867-228870917	HCM	heart:	n/a
35	chr1:228872121-228872171	ProgFib	skin:	n/a
36	chr1:228870629-228870679	HCM	heart:	n/a
37	chr1:228871665-228871715	HRE	kidney:	n/a
38	chr1:228871301-228871351	PANC-1	pancreas:	n/a
39	chr1:228870709-228870759	Jurkat	blood:	n/a
40	chr1:228870811-228870861	AG09309	skin:	n/a
41	chr1:228870637-228870687	HMEC	breast:	n/a
42	chr1:228870637-228870687	SK-N-MC	brain:	n/a
43	chr1:228871677-228871727	HCPEpiC	choroid plexus:	n/a
44	chr1:228871665-228871715	BJ	skin:	n/a
45	chr1:228870885-228870935	HCF	heart:	n/a
46	chr1:228872185-228872235	HCF	heart:	n/a
47	chr1:228871311-228871361	SAEC	small airway:	n/a
48	chr1:228870454-228870504	AG04449	skin:	fetal
49	chr1:228870629-228870679	NT2-D1	testis:	n/a
50	chr1:228871665-228871715	SK-N-SH	brain:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:228860050..228863898-chr1:228864456..228870040,6	MCF-7	breast:
2	chr1:228871650..228872336-chr1:229283932..229284444,2	MCF-7	breast:
3	chr1:228870974..228874192-chr1:229289899..229293413,3	MCF-7	breast:
4	chr1:228872086..228874934-chr1:228877939..228879672,2	MCF-7	breast:
5	chr1:228870761..228871699-chr1:229362927..229363987,3	MCF-7	breast:
6	chr1:228871721..228874007-chr1:228877352..228880161,2	MCF-7	breast:

No data

Variant related genes	Relation type
RHOU	TF binding region
RHOU	CpG island
ENSG00000233920	chromatin interactions

Extended variants
information (count: 88 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:88 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs529541920	chr1:228869855-228869856	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs534653723	chr1:228869878-228869879	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs368612289	chr1:228869893-228869894	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs141633646	chr1:228869937-228869938	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs143578288	chr1:228869938-228869939	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs554265057	chr1:228870144-228870145	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs543242027	chr1:228870169-228870170	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs73092845	chr1:228870212-228870213	Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs562932059	chr1:228870224-228870225	Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs571248586	chr1:228870339-228870340	Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs150374748	chr1:228870340-228870341	Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs371078144	chr1:228870348-228870349	Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs151192724	chr1:228870372-228870373	Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs374502583	chr1:228870373-228870374	Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs543499163	chr1:228870374-228870375	Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs372843269	chr1:228870408-228870409	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs3820265	chr1:228870417-228870418	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs116672711	chr1:228870450-228870451	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs545665782	chr1:228870456-228870457	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
20	rs193064816	chr1:228870592-228870593	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
21	rs3806285	chr1:228870664-228870665	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs192161824	chr1:228870674-228870675	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
23	rs3840437	chr1:228870697-228870698	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs116037497	chr1:228870732-228870733	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
25	rs561706530	chr1:228870733-228870734	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
26	rs114559973	chr1:228870762-228870763	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs373338705	chr1:228870795-228870796	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs564218716	chr1:228870862-228870863	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs533381769	chr1:228870872-228870873	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs377438104	chr1:228871008-228871009	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs150747720	chr1:228871064-228871065	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs370337097	chr1:228871094-228871095	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs184377343	chr1:228871100-228871101	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs137964956	chr1:228871175-228871176	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs377167597	chr1:228871192-228871193	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs537163135	chr1:228871217-228871218	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs374170957	chr1:228871264-228871265	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs189641535	chr1:228871267-228871268	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs577005294	chr1:228871400-228871401	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs575304125	chr1:228871449-228871450	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs181166088	chr1:228871474-228871475	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs552847913	chr1:228871513-228871514	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs573102035	chr1:228871623-228871624	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs369741000	chr1:228871646-228871647	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs376471948	chr1:228871649-228871650	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs376505690	chr1:228871675-228871676	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs372361240	chr1:228871681-228871682	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs3738073	chr1:228871693-228871694	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs569745402	chr1:228871711-228871712	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
50	rs561769939	chr1:228871723-228871724	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Mental retardation	19951919	CNVD
Non-syndromic sensorineural hearing loss	17873649	CNVD
Basal cell lymphoma	17053054	CNVD
Autism	14699429	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	21138945	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
abnormal development	18461090	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Melanoma	17363583	CNVD
Myelofibrosis	22110671	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Intellectual disability	21811512	CNVD
Lung adenocarcinoma	21935476	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:388 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:228859800-228870400	Weak transcription	Stomach Mucosa	stomach
2	chr1:228864000-228870600	Weak transcription	Placenta	Placenta
3	chr1:228864200-228870000	Weak transcription	Fetal Lung	lung
4	chr1:228868400-228870800	Weak transcription	Gastric	stomach
5	chr1:228869800-228870200	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr1:228869800-228871000	Enhancers	Fetal Brain Male	brain
7	chr1:228870000-228870400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr1:228870000-228870400	Enhancers	Duodenum Smooth Muscle	Duodenum
9	chr1:228870000-228870400	Enhancers	Fetal Lung	lung
10	chr1:228870000-228870400	Enhancers	Ovary	ovary
11	chr1:228870200-228870400	Active TSS	Breast Myoepithelial Primary Cells	Breast
12	chr1:228870200-228870400	Bivalent Enhancer	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr1:228870200-228870400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr1:228870200-228870400	Enhancers	Brain Anterior Caudate	brain
15	chr1:228870200-228870400	Enhancers	Brain Germinal Matrix	brain
16	chr1:228870200-228870400	Active TSS	Fetal Brain Female	brain
17	chr1:228870200-228870400	Enhancers	Fetal Intestine Small	intestine
18	chr1:228870200-228870400	Enhancers	Rectal Smooth Muscle	rectum
19	chr1:228870200-228870400	Enhancers	A549	lung
20	chr1:228870200-228870400	Bivalent Enhancer	HepG2	liver
21	chr1:228870200-228870400	Enhancers	Monocytes-CD14+_RO01746	blood
22	chr1:228870200-228870600	Enhancers	Brain Cingulate Gyrus	brain
23	chr1:228870200-228872000	Active TSS	Skeletal Muscle Male	skeletal muscle
24	chr1:228870200-228875400	Active TSS	Brain Angular Gyrus	brain
25	chr1:228870400-228870600	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr1:228870400-228870600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
27	chr1:228870400-228870600	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
28	chr1:228870400-228870600	Enhancers	Primary monocytes fromperipheralblood	blood
29	chr1:228870400-228870600	Bivalent Enhancer	Primary B cells from cord blood	blood
30	chr1:228870400-228870600	Enhancers	Primary T cells from cord blood	blood
31	chr1:228870400-228870600	Enhancers	Primary hematopoietic stem cells	blood
32	chr1:228870400-228870600	Enhancers	Primary hematopoietic stem cells short term culture	blood
33	chr1:228870400-228870600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
34	chr1:228870400-228870600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
35	chr1:228870400-228870600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
36	chr1:228870400-228870600	Enhancers	Primary T helper cells PMA-I stimulated	--
37	chr1:228870400-228870600	Enhancers	Primary T helper cells fromperipheralblood	blood
38	chr1:228870400-228870600	Bivalent Enhancer	Primary T regulatory cells fromperipheralblood	blood
39	chr1:228870400-228870600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
40	chr1:228870400-228870600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
41	chr1:228870400-228870600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
42	chr1:228870400-228870600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr1:228870400-228870600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr1:228870400-228870600	Enhancers	Cortex derived primary cultured neurospheres	brain
45	chr1:228870400-228870600	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr1:228870400-228870600	Active TSS	Adipose Nuclei	Adipose
47	chr1:228870400-228870600	Enhancers	Liver	Liver
48	chr1:228870400-228870600	Enhancers	Brain Hippocampus Middle	brain
49	chr1:228870400-228870600	Enhancers	Brain Substantia Nigra	brain
50	chr1:228870400-228870600	Enhancers	Colon Smooth Muscle	Colon

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