Variant report

Variant esv3410139
Chromosome Location chr21:40111732-40113680
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:40102600-40124800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr21:40106400-40111800 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr21:40106600-40112800 Weak transcription Colonic Mucosa Colon
4 chr21:40107000-40113000 Weak transcription Primary T cells from cord blood blood
5 chr21:40107400-40113000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr21:40107600-40112000 Weak transcription Primary monocytes fromperipheralblood blood
7 chr21:40108000-40113200 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr21:40108200-40111800 Weak transcription Primary hematopoietic stem cells blood
9 chr21:40108200-40111800 Weak transcription HepG2 liver
10 chr21:40108400-40111800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr21:40108400-40111800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr21:40108400-40111800 Weak transcription Duodenum Mucosa Duodenum
13 chr21:40108400-40111800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr21:40108400-40111800 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr21:40108400-40113000 Weak transcription Dnd41 blood
16 chr21:40109800-40111800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr21:40111600-40112000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr21:40111600-40112200 Enhancers Sigmoid Colon Sigmoid Colon
19 chr21:40111600-40113600 Enhancers Small Intestine intestine
20 chr21:40111600-40116200 Enhancers Fetal Intestine Large intestine
21 chr21:40111600-40116400 Enhancers Fetal Intestine Small intestine
22 chr21:40111800-40112000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr21:40111800-40112000 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr21:40111800-40112000 Enhancers Primary mononuclear cells fromperipheralblood Blood
25 chr21:40111800-40112200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
26 chr21:40111800-40112200 Enhancers Primary hematopoietic stem cells blood
27 chr21:40111800-40112200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr21:40111800-40112200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr21:40111800-40112200 Active TSS Rectal Mucosa Donor 29 rectum
30 chr21:40111800-40112200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
31 chr21:40111800-40112200 Enhancers HepG2 liver
32 chr21:40111800-40112400 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr21:40111800-40112400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr21:40111800-40114200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr21:40111800-40114200 Enhancers Duodenum Mucosa Duodenum
36 chr21:40112000-40112200 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr21:40112000-40112200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr21:40112000-40112200 Flanking Active TSS Brain Anterior Caudate brain
39 chr21:40112000-40112400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr21:40112000-40112600 Enhancers Primary monocytes fromperipheralblood blood
41 chr21:40112000-40114000 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr21:40112000-40114400 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr21:40112000-40115000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr21:40112200-40112400 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr21:40112200-40112400 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr21:40112200-40112400 Enhancers Rectal Mucosa Donor 31 rectum
47 chr21:40112200-40113000 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr21:40112200-40113200 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr21:40112200-40113200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr21:40112200-40113400 Weak transcription Primary hematopoietic stem cells blood

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