Variant report

Variant	esv3428448
Chromosome Location	chr15:79236847-79239745
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:306)
CpG islands
(count:488)
Chromatin interactive
region (count:14)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:306 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:79237453-79237637	K562	blood:	n/a	n/a
2	ARID3A	chr15:79237276-79237591	HepG2	liver:	n/a	n/a
3	BACH1	chr15:79237275-79237475	H1-hESC	embryonic stem cell:	n/a	n/a
4	BCLAF1	chr15:79236972-79237604	GM12878	blood:	n/a	chr15:79237517-79237526 chr15:79236999-79237008
5	BCLAF1	chr15:79236898-79237453	GM12878	blood:	n/a	chr15:79236999-79237008
6	BHLHE40	chr15:79237014-79237605	HepG2	liver:	n/a	n/a
7	BHLHE40	chr15:79237131-79237691	GM12878	blood:	n/a	n/a
8	BHLHE40	chr15:79237170-79237478	HepG2	liver:	n/a	n/a
9	BHLHE40	chr15:79236709-79237846	K562	blood:	n/a	n/a
10	BRCA1	chr15:79236821-79236986	HepG2	liver:	n/a	n/a
11	CBX3	chr15:79237042-79237731	K562	blood:	n/a	n/a
12	CCNT2	chr15:79237075-79237818	K562	blood:	n/a	n/a
13	CEBPD	chr15:79237232-79237487	HepG2	liver:	n/a	n/a
14	CEBPD	chr15:79237126-79237899	K562	blood:	n/a	n/a
15	CEBPD	chr15:79237077-79237550	HepG2	liver:	n/a	n/a
16	CEBPD	chr15:79237355-79237775	K562	blood:	n/a	n/a
17	CHD1	chr15:79236990-79237106	H1-hESC	embryonic stem cell:	n/a	n/a
18	CHD1	chr15:79235702-79237473	GM12878	blood:	n/a	chr15:79237399-79237409
19	CHD2	chr15:79236652-79236891	GM12878	blood:	n/a	n/a
20	CHD2	chr15:79237272-79237595	HepG2	liver:	n/a	chr15:79237399-79237409
21	CHD2	chr15:79237161-79237653	GM12878	blood:	n/a	chr15:79237399-79237409
22	CHD2	chr15:79237281-79237400	H1-hESC	embryonic stem cell:	n/a	n/a
23	CHD2	chr15:79236878-79237725	K562	blood:	n/a	chr15:79237399-79237409
24	CREB1	chr15:79237139-79237808	A549	lung:	n/a	n/a
25	CTCF	chr15:79237460-79237610	NHEK	skin:	n/a	chr15:79237510-79237523
26	CTCF	chr15:79237805-79237848	GM19239	blood:	n/a	n/a
27	CTCF	chr15:79237520-79237670	GM12874	blood:	n/a	n/a
28	CTCF	chr15:79237150-79237663	GM12878	blood:	n/a	chr15:79237510-79237523
29	CTCF	chr15:79237160-79237310	GM12866	blood:	n/a	n/a
30	CTCF	chr15:79237200-79237350	GM12867	blood:	n/a	n/a
31	CTCF	chr15:79237541-79237588	H1-hESC	embryonic stem cell:	n/a	n/a
32	CTCF	chr15:79237180-79237330	HCPEpiC	choroid plexus:	n/a	n/a
33	CTCF	chr15:79237420-79237570	SAEC	small airway:	n/a	chr15:79237510-79237523
34	CTCF	chr15:79237140-79237290	SK-N-SH_RA	brain:	n/a	n/a
35	CTCF	chr15:79237480-79237630	GM12864	blood:	n/a	chr15:79237510-79237523
36	CTCF	chr15:79237500-79237650	HepG2	liver:	n/a	chr15:79237510-79237523
37	CTCF	chr15:79237520-79237670	GM12875	blood:	n/a	n/a
38	CTCF	chr15:79237220-79237370	NHEK	skin:	n/a	n/a
39	CTCF	chr15:79237500-79237650	HEK293	kidney:	n/a	chr15:79237510-79237523
40	CTCF	chr15:79237500-79237650	GM12873	blood:	n/a	chr15:79237510-79237523
41	CTCF	chr15:79237460-79237610	GM12865	blood:	n/a	chr15:79237510-79237523
42	CTCF	chr15:79237460-79237610	GM12868	blood:	n/a	chr15:79237510-79237523
43	CTCF	chr15:79237080-79237230	GM12869	blood:	n/a	n/a
44	CTCF	chr15:79237480-79237630	GM12871	blood:	n/a	chr15:79237510-79237523
45	CTCF	chr15:79237480-79237630	GM12878	blood:	n/a	chr15:79237510-79237523
46	CTCF	chr15:79237500-79237650	WERI-Rb-1	eye:	n/a	chr15:79237510-79237523
47	CTCF	chr15:79237060-79237210	AG04449	skin:	n/a	n/a
48	CTCF	chr15:79237040-79237190	HRE	kidney:	n/a	n/a
49	CTCF	chr15:79237560-79237710	SAEC	small airway:	n/a	n/a
50	CTCF	chr15:79237351-79237370	GM13977	blood:	n/a	n/a

(count:488 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:79238723-79238773	GM06990	blood:	n/a
2	chr15:79237654-79237704	MCF10A-Er-Src	breast:	n/a
3	chr15:79237381-79237431	AG09319	gingival:	n/a
4	chr15:79237145-79237195	AoSMC	blood vessel:	n/a
5	chr15:79237654-79237704	GM12878	blood:	n/a
6	chr15:79237217-79237267	MCF-7	breast:	n/a
7	chr15:79238723-79238773	RPTEC	kidney:	n/a
8	chr15:79237157-79237207	NT2-D1	testis:	n/a
9	chr15:79237654-79237704	GM12891	blood:	n/a
10	chr15:79238723-79238773	HCF	heart:	n/a
11	chr15:79238723-79238773	NHBE	bronchial:	n/a
12	chr15:79237654-79237704	AG04450	lung:	fetal
13	chr15:79237381-79237431	GM19239	blood:	n/a
14	chr15:79237157-79237207	AG04449	skin:	fetal
15	chr15:79237381-79237431	HUVEC	blood vessel:	n/a
16	chr15:79237145-79237195	ovcar-3	ovarian:	n/a
17	chr15:79237145-79237195	Caco-2	colon:	n/a
18	chr15:79237654-79237704	SK-N-SH_RA	brain:	n/a
19	chr15:79237145-79237195	ECC-1	luminal epithelium:	n/a
20	chr15:79238723-79238773	PFSK-1	brain:	n/a
21	chr15:79237381-79237431	HCT-116	colon:	n/a
22	chr15:79237654-79237704	HCT-116	colon:	n/a
23	chr15:79237381-79237431	AG10803	skin:	n/a
24	chr15:79237381-79237431	Caco-2	colon:	n/a
25	chr15:79236839-79236889	H1-hESC	embryonic stem cell:	embryo
26	chr15:79237394-79237444	HRPEpiC	eye:	n/a
27	chr15:79237217-79237267	SK-N-SH	brain:	n/a
28	chr15:79237394-79237444	Hela-S3	cervix:	n/a
29	chr15:79237381-79237431	CMK	blood:	n/a
30	chr15:79238723-79238773	NB4	blood:	n/a
31	chr15:79237654-79237704	AG09319	gingival:	n/a
32	chr15:79237145-79237195	AG09309	skin:	n/a
33	chr15:79237654-79237704	HEEpiC	esophagus:	n/a
34	chr15:79237381-79237431	GM12878	blood:	n/a
35	chr15:79237217-79237267	A549	lung:	n/a
36	chr15:79237145-79237195	NB4	blood:	n/a
37	chr15:79238723-79238773	AG09309	skin:	n/a
38	chr15:79237381-79237431	HCM	heart:	n/a
39	chr15:79237217-79237267	AoSMC	blood vessel:	n/a
40	chr15:79237381-79237431	SK-N-SH_RA	brain:	n/a
41	chr15:79236839-79236889	SK-N-SH_RA	brain:	n/a
42	chr15:79237394-79237444	H1-hESC	embryonic stem cell:	embryo
43	chr15:79237217-79237267	Caco-2	colon:	n/a
44	chr15:79237654-79237704	A549	lung:	n/a
45	chr15:79238723-79238773	SK-N-SH_RA	brain:	n/a
46	chr15:79236839-79236889	RPTEC	kidney:	n/a
47	chr15:79237217-79237267	HCT-116	colon:	n/a
48	chr15:79238723-79238773	H1-hESC	embryonic stem cell:	embryo
49	chr15:79237654-79237704	HEK293	kidney:	embryo
50	chr15:79236839-79236889	HCM	heart:	n/a

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:79238426..79240913-chr15:79263614..79265466,3	MCF-7	breast:
2	chr15:79164120..79166028-chr15:79235714..79238649,2	K562	blood:
3	chr15:79219205..79223895-chr15:79234790..79239038,6	MCF-7	breast:
4	chr15:79238657..79240315-chr15:79242629..79245251,2	K562	blood:
5	chr15:79164120..79166260-chr15:79235714..79238649,3	K562	blood:
6	chr15:79228914..79232769-chr15:79235901..79239047,4	MCF-7	breast:
7	chr15:79224751..79228848-chr15:79235939..79238870,4	MCF-7	breast:
8	chr15:79228459..79231609-chr15:79232688..79237314,4	K562	blood:
9	chr15:79236829..79239228-chr15:79240562..79242151,2	K562	blood:
10	chr15:79223240..79225058-chr15:79235224..79237418,3	MCF-7	breast:
11	chr15:79229734..79233307-chr15:79235000..79238757,6	MCF-7	breast:
12	chr15:79222345..79225252-chr15:79235201..79237549,2	K562	blood:
13	chr15:79228950..79233188-chr15:79235013..79237607,6	K562	blood:
14	chr15:79235057..79237029-chr15:79295283..79298269,2	K562	blood:

No data

Variant related genes	Relation type
CTSH	TF binding region
CTSH	CpG island
ENSG00000103811	chromatin interactions
ENSG00000058335	chromatin interactions
ENSG00000185787	chromatin interactions

Extended variants
information (count: 122 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:122 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs561202242	chr15:79236867-79236868	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs534417736	chr15:79236929-79236930	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs11072818	chr15:79236933-79236934	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs187002432	chr15:79236961-79236962	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs191391822	chr15:79236972-79236973	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs570272408	chr15:79237009-79237010	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs539310952	chr15:79237029-79237030	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs28529765	chr15:79237036-79237037	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs371910350	chr15:79237068-79237069	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs566398046	chr15:79237081-79237082	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs533533607	chr15:79237112-79237113	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs3217526	chr15:79237115-79237116	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs553778429	chr15:79237119-79237120	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs142529123	chr15:79237157-79237158	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs535954419	chr15:79237172-79237173	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs555895645	chr15:79237175-79237176	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs1036937	chr15:79237180-79237181	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
18	rs369681400	chr15:79237185-79237186	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs367973477	chr15:79237191-79237192	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs532901364	chr15:79237214-79237215	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs558555463	chr15:79237215-79237216	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs1036938	chr15:79237247-79237248	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs541062615	chr15:79237251-79237252	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs35001431	chr15:79237257-79237258	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs530176717	chr15:79237263-79237264	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs368667288	chr15:79237270-79237271	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs543936667	chr15:79237290-79237291	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs545051698	chr15:79237291-79237292	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs2289702	chr15:79237293-79237294	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs552833870	chr15:79237296-79237297	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs374791039	chr15:79237313-79237314	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs528824033	chr15:79237319-79237320	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs1036939	chr15:79237324-79237325	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs373577561	chr15:79237338-79237339	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs535918238	chr15:79237349-79237350	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs540838107	chr15:79237383-79237384	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs569444480	chr15:79237395-79237396	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs538422821	chr15:79237399-79237400	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs558761718	chr15:79237400-79237401	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs572236205	chr15:79237402-79237403	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs199940339	chr15:79237403-79237404	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs541326815	chr15:79237404-79237405	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs142909197	chr15:79237405-79237406	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs61441507	chr15:79237445-79237446	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs554620777	chr15:79237447-79237448	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs574902015	chr15:79237480-79237481	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs375667376	chr15:79237516-79237517	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs181583992	chr15:79237524-79237525	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs532700723	chr15:79237537-79237538	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs372757044	chr15:79237571-79237572	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	17322880	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Autism	21480499	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	16864856	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17133270	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16774939	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Sudden cardiac death	19188705	CNVD
Breast cancer	21364760	CNVD

Chromatin state (count:341 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:79235000-79237000	Flanking Active TSS	K562	blood
2	chr15:79235400-79237600	Active TSS	Fetal Intestine Small	intestine
3	chr15:79235400-79237600	Active TSS	GM12878-XiMat	blood
4	chr15:79235400-79238000	Active TSS	Brain Hippocampus Middle	brain
5	chr15:79235600-79237600	Active TSS	Gastric	stomach
6	chr15:79235800-79237000	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
7	chr15:79236000-79237000	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
8	chr15:79236000-79237000	Bivalent/Poised TSS	Fetal Thymus	thymus
9	chr15:79236000-79237000	Enhancers	Placenta Amnion	Placenta Amnion
10	chr15:79236000-79237200	Flanking Active TSS	Primary B cells from cord blood	blood
11	chr15:79236000-79237200	Flanking Active TSS	Liver	Liver
12	chr15:79236000-79237200	Flanking Active TSS	Duodenum Mucosa	Duodenum
13	chr15:79236000-79237800	Active TSS	Fetal Intestine Large	intestine
14	chr15:79236000-79237800	Active TSS	Fetal Kidney	kidney
15	chr15:79236200-79237000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr15:79236200-79237000	Flanking Active TSS	Stomach Smooth Muscle	stomach
17	chr15:79236200-79237000	Flanking Active TSS	HSMMtube	muscle
18	chr15:79236200-79237400	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
19	chr15:79236200-79237400	Flanking Active TSS	Spleen	Spleen
20	chr15:79236200-79237800	Flanking Active TSS	Adipose Nuclei	Adipose
21	chr15:79236200-79237800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
22	chr15:79236200-79237800	Active TSS	Psoas Muscle	Psoas
23	chr15:79236200-79237800	Flanking Active TSS	Right Ventricle	heart
24	chr15:79236200-79237800	Bivalent/Poised TSS	Thymus	Thymus
25	chr15:79236200-79238000	Active TSS	Brain Angular Gyrus	brain
26	chr15:79236400-79237000	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr15:79236400-79237000	Flanking Active TSS	Brain Anterior Caudate	brain
28	chr15:79236400-79237000	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
29	chr15:79236400-79237000	Flanking Active TSS	Right Atrium	heart
30	chr15:79236400-79237200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
31	chr15:79236400-79237200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
32	chr15:79236400-79237200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
33	chr15:79236400-79237200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
34	chr15:79236400-79237200	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr15:79236400-79237200	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
36	chr15:79236400-79237400	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
37	chr15:79236400-79237400	Flanking Active TSS	Esophagus	oesophagus
38	chr15:79236400-79237400	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
39	chr15:79236400-79237400	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
40	chr15:79236400-79237600	Flanking Active TSS	Pancreas	Pancrea
41	chr15:79236400-79237600	Active TSS	Rectal Mucosa Donor 31	rectum
42	chr15:79236400-79237800	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
43	chr15:79236400-79237800	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
44	chr15:79236400-79237800	Active TSS	Brain Substantia Nigra	brain
45	chr15:79236400-79237800	Active TSS	Pancreatic Islets	Pancreatic Islet
46	chr15:79236400-79238000	Active TSS	H9 Cell Line	embryonic stem cell
47	chr15:79236400-79238000	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
48	chr15:79236400-79238000	Bivalent Enhancer	Fetal Brain Male	brain
49	chr15:79236600-79237000	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr15:79236600-79237000	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell

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