Variant report

Variant	esv3430638
Chromosome Location	chr7:112620663-113134403
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3667)
CpG islands
(count:1953)
Chromatin interactive
region (count:268)
LncRNA
region (count:26)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3667 , 50 per page) page: 1 2 3 4 5 6 7 ... 74

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:112782280-112783198	K562	blood:	n/a	n/a
2	ARID3A	chr7:112758448-112758962	HepG2	liver:	n/a	n/a
3	ARID3A	chr7:112740190-112740639	K562	blood:	n/a	n/a
4	ARID3A	chr7:112727223-112728259	K562	blood:	n/a	n/a
5	ARID3A	chr7:112721566-112721697	K562	blood:	n/a	n/a
6	ARID3A	chr7:112903890-112904025	K562	blood:	n/a	n/a
7	ARID3A	chr7:112799920-112799963	K562	blood:	n/a	n/a
8	ARID3A	chr7:112758083-112758932	K562	blood:	n/a	n/a
9	ARID3A	chr7:113100171-113100369	HepG2	liver:	n/a	n/a
10	ARID3A	chr7:112765831-112766053	K562	blood:	n/a	n/a
11	ARID3A	chr7:112724927-112725289	K562	blood:	n/a	n/a
12	ARID3A	chr7:112751837-112751866	K562	blood:	n/a	n/a
13	ATF1	chr7:112989582-112989666	K562	blood:	n/a	n/a
14	ATF1	chr7:112732912-112733232	K562	blood:	n/a	n/a
15	ATF1	chr7:112758385-112758989	K562	blood:	n/a	n/a
16	ATF1	chr7:112644827-112645228	K562	blood:	n/a	n/a
17	ATF1	chr7:112711587-112711816	K562	blood:	n/a	n/a
18	ATF1	chr7:112761243-112761443	K562	blood:	n/a	n/a
19	ATF1	chr7:112727241-112728091	K562	blood:	n/a	n/a
20	ATF1	chr7:113011968-113011971	K562	blood:	n/a	n/a
21	ATF1	chr7:112642741-112642792	K562	blood:	n/a	n/a
22	ATF1	chr7:112782341-112783153	K562	blood:	n/a	n/a
23	ATF1	chr7:112845598-112845838	K562	blood:	n/a	n/a
24	ATF1	chr7:112724379-112725078	K562	blood:	n/a	n/a
25	ATF1	chr7:112695650-112695833	K562	blood:	n/a	n/a
26	ATF1	chr7:112842586-112842605	K562	blood:	n/a	n/a
27	ATF1	chr7:112921615-112921625	K562	blood:	n/a	n/a
28	ATF1	chr7:112781184-112781280	K562	blood:	n/a	n/a
29	ATF1	chr7:112929247-112929556	K562	blood:	n/a	n/a
30	ATF1	chr7:112725919-112726283	K562	blood:	n/a	n/a
31	ATF1	chr7:112946391-112946665	K562	blood:	n/a	n/a
32	ATF1	chr7:112757504-112757709	K562	blood:	n/a	n/a
33	ATF2	chr7:112758357-112758936	GM12878	blood:	n/a	n/a
34	ATF3	chr7:112711624-112711766	K562	blood:	n/a	n/a
35	ATF3	chr7:112782820-112783360	K562	blood:	n/a	n/a
36	ATF3	chr7:112757306-112757768	K562	blood:	n/a	n/a
37	ATF3	chr7:112711542-112711857	K562	blood:	n/a	n/a
38	ATF3	chr7:112758551-112758720	GM12878	blood:	n/a	n/a
39	ATF3	chr7:112782231-112782744	K562	blood:	n/a	n/a
40	ATF3	chr7:112758479-112758831	K562	blood:	n/a	n/a
41	BACH1	chr7:112726746-112726772	K562	blood:	n/a	n/a
42	BACH1	chr7:112799638-112799698	K562	blood:	n/a	n/a
43	BACH1	chr7:112699090-112699105	K562	blood:	n/a	n/a
44	BACH1	chr7:112871958-112872067	H1-hESC	embryonic stem cell:	n/a	n/a
45	BACH1	chr7:112726678-112726937	H1-hESC	embryonic stem cell:	n/a	n/a
46	BACH1	chr7:112758215-112759089	K562	blood:	n/a	n/a
47	BACH1	chr7:112673397-112673415	K562	blood:	n/a	n/a
48	BACH1	chr7:112758317-112759015	H1-hESC	embryonic stem cell:	n/a	n/a
49	BACH1	chr7:112796528-112796607	K562	blood:	n/a	n/a
50	BACH1	chr7:112740136-112740140	H1-hESC	embryonic stem cell:	n/a	n/a

(count:1953 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:112758954-112759004	HRCEpiC	kidney:	n/a
2	chr7:112758954-112759004	HRCEpiC	kidney:	n/a
3	chr7:112907863-112907913	AoSMC	blood vessel:	n/a
4	chr7:112726089-112726139	NB4	blood:	n/a
5	chr7:112726869-112726919	Hepatocyte	liver:	n/a
6	chr7:112907863-112907913	GM12892	blood:	n/a
7	chr7:112724674-112724724	AG10803	skin:	n/a
8	chr7:112726869-112726919	HCF	heart:	n/a
9	chr7:113090002-113090052	SAEC	small airway:	n/a
10	chr7:113090002-113090052	HMEC	breast:	n/a
11	chr7:112727914-112727964	RPTEC	kidney:	n/a
12	chr7:112758502-112758552	GM12878	blood:	n/a
13	chr7:112758800-112758850	RPTEC	kidney:	n/a
14	chr7:112758800-112758850	ECC-1	luminal epithelium:	n/a
15	chr7:112726396-112726446	A549	lung:	n/a
16	chr7:112838431-112838481	GM19239	blood:	n/a
17	chr7:112903509-112903559	LNCaP	prostate:	n/a
18	chr7:112758744-112758794	RPTEC	kidney:	n/a
19	chr7:112726541-112726591	SAEC	small airway:	n/a
20	chr7:112726869-112726919	U87	brain:	n/a
21	chr7:112758744-112758794	GM12891	blood:	n/a
22	chr7:112907863-112907913	A549	lung:	n/a
23	chr7:112838431-112838481	NHBE	bronchial:	n/a
24	chr7:113011963-113012013	BE2_C	brain:	n/a
25	chr7:112720816-112720866	HCT-116	colon:	n/a
26	chr7:112727506-112727556	HCT-116	colon:	n/a
27	chr7:112758903-112758953	HAEpiC	amniotic membrane:	n/a
28	chr7:112727914-112727964	NB4	blood:	n/a
29	chr7:112838431-112838481	Jurkat	blood:	n/a
30	chr7:112726549-112726599	PANC-1	pancreas:	n/a
31	chr7:112726541-112726591	AG04449	skin:	fetal
32	chr7:112758734-112758784	SAEC	small airway:	n/a
33	chr7:112758903-112758953	HPAEpiC	pulmonary alveolar:	n/a
34	chr7:112726549-112726599	H1-hESC	embryonic stem cell:	embryo
35	chr7:112758744-112758794	HEEpiC	esophagus:	n/a
36	chr7:112725899-112725949	HIPEpiC	eye:	n/a
37	chr7:112726869-112726919	Jurkat	blood:	n/a
38	chr7:112727914-112727964	IMR90	lung:	fetal
39	chr7:112758903-112758953	NH-A	brain:	n/a
40	chr7:112726396-112726446	Hela-S3	cervix:	n/a
41	chr7:112758734-112758784	T-47D	breast:	n/a
42	chr7:112907863-112907913	Hepatocyte	liver:	n/a
43	chr7:112726547-112726597	HCT-116	colon:	n/a
44	chr7:112726549-112726599	SKMC	muscle:	n/a
45	chr7:112758748-112758798	HCF	heart:	n/a
46	chr7:112725899-112725949	GM12891	blood:	n/a
47	chr7:112727914-112727964	MCF-7	breast:	n/a
48	chr7:112726396-112726446	NB4	blood:	n/a
49	chr7:112727423-112727473	HCF	heart:	n/a
50	chr7:113090002-113090052	HEK293	kidney:	embryo

(count:268 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr7:112654853..112656193-chr7:112753393..112754620,7	MCF-7	breast:
2	chr7:112655256..112655797-chr7:112929374..112930128,2	MCF-7	breast:
3	chr7:112725230..112728019-chr7:112757874..112760567,2	K562	blood:
4	chr7:112682248..112683838-chr7:112894672..112896979,2	K562	blood:
5	chr7:113100189..113102215-chr7:113103727..113106100,2	K562	blood:
6	chr7:112811150..112812144-chr7:112920712..112921503,2	MCF-7	breast:
7	chr7:112757982..112760239-chr7:112779066..112780794,2	K562	blood:
8	chr7:99433750..99434429-chr7:113008535..113009149,2	MCF-7	breast:
9	chr7:113043772..113046684-chr7:113053716..113055424,2	MCF-7	breast:
10	chr7:112721230..112724199-chr7:112725875..112727667,2	K562	blood:
11	chr7:113033970..113036356-chr7:113044345..113046971,2	K562	blood:
12	chr7:112764216..112766097-chr7:112779643..112782310,2	K562	blood:
13	chr7:112849832..112851498-chr7:112857060..112858734,2	K562	blood:
14	chr7:112766932..112769724-chr7:112781846..112784027,2	K562	blood:
15	chr7:113011064..113013655-chr7:113032102..113033697,2	K562	blood:
16	chr7:112713707..112715518-chr7:112717712..112719924,2	K562	blood:
17	chr7:113042048..113044438-chr7:113046056..113047809,2	K562	blood:
18	chr7:112774443..112776033-chr7:112801887..112803509,2	K562	blood:
19	chr7:112768327..112770672-chr7:112770872..112773176,2	K562	blood:
20	chr7:112841354..112843011-chr7:112844071..112845692,2	K562	blood:
21	chr7:112696520..112698200-chr7:112699916..112702852,2	MCF-7	breast:
22	chr7:112696520..112698200-chr7:112699916..112702852,2	MCF-7	breast:
23	chr7:112788647..112791637-chr7:112793429..112795616,2	K562	blood:
24	chr7:112609190..112612964-chr7:112622640..112627113,4	K562	blood:
25	chr7:112758675..112760298-chr7:112794842..112798647,3	K562	blood:
26	chr7:113028637..113030163-chr7:113052999..113055912,2	K562	blood:
27	chr7:112887063..112887777-chr7:112921303..112922004,3	MCF-7	breast:
28	chr7:112737881..112740697-chr7:112741857..112745616,3	K562	blood:
29	chr7:112820157..112823149-chr7:112824756..112826856,2	K562	blood:
30	chr7:112882709..112884579-chr7:112885752..112887740,2	K562	blood:
31	chr7:112758801..112761604-chr7:112790975..112792913,2	K562	blood:
32	chr7:112747364..112749497-chr7:112755148..112758022,3	K562	blood:
33	chr7:113042011..113045853-chr7:113047811..113051782,4	MCF-7	breast:
34	chr7:112654853..112656193-chr7:112753393..112754620,7	MCF-7	breast:
35	chr7:112902968..112904639-chr7:112919791..112922267,2	MCF-7	breast:
36	chr7:113026289..113028138-chr7:113029115..113030912,2	K562	blood:
37	chr7:112654683..112655746-chr7:113061433..113062375,3	K562	blood:
38	chr7:112854163..112856387-chr7:112856648..112858157,2	MCF-7	breast:
39	chr7:112655287..112655802-chr7:113061468..113062197,2	MCF-7	breast:
40	chr7:112854163..112856387-chr7:112856648..112858157,2	MCF-7	breast:
41	chr7:112623073..112625908-chr7:112627681..112629451,2	K562	blood:
42	chr7:112714018..112716615-chr7:112717712..112719253,2	K562	blood:
43	chr7:112759649..112762090-chr7:112783076..112784947,2	K562	blood:
44	chr7:112738100..112740968-chr7:112754708..112756383,2	K562	blood:
45	chr7:112764896..112766469-chr7:112769155..112770793,2	K562	blood:
46	chr7:112089330..112091829-chr7:112756736..112758677,2	K562	blood:
47	chr7:112737881..112740697-chr7:112741857..112744410,3	K562	blood:
48	chr7:112856306..112858069-chr7:112863291..112865541,2	K562	blood:
49	chr7:112753755..112755851-chr7:112756779..112758396,2	MCF-7	breast:
50	chr7:112723034..112725310-chr7:112753782..112755599,2	MCF-7	breast:

(count:26 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C7orf60-1	chr7:112635623-112635698	NONHSAT122803
2	lnc-C7orf60-1	chr7:112635623-112635682	ENSG00000234520
3	lnc-C7orf60-1	chr7:112626591-112626719	NR_110162
4	lnc-AC073348.1-4	chr7:113109789-113110137	NONHSAT122818
5	lnc-AC073348.1-1	chr7:112740773-112740940	NONHSAT122814
6	lnc-AC073348.1-1	chr7:112747810-112747854	NONHSAT122814
7	lnc-AC073348.1-1	chr7:112740718-112740940	ENSG00000225457.1
8	lnc-AC073348.1-1	chr7:112785071-112785213	ENSG00000225457.1
9	lnc-C7orf60-1	chr7:112623042-112623070	NONHSAT122804
10	lnc-AC073348.1-1	chr7:112785721-112785830	ENSG00000225457.1
11	lnc-AC073348.1-5	chr7:113055744-113056377	NONHSAT122817
12	lnc-AC073348.1-4	chr7:113117164-113124124	NONHSAT122818
13	lnc-C7orf60-1	chr7:112635623-112635689	ENSG00000234520
14	lnc-C7orf60-1	chr7:112620959-112621216	ENSG00000234520
15	lnc-C7orf60-1	chr7:112635623-112635698	NR_110162
16	lnc-C7orf60-1	chr7:112635623-112635698	NONHSAT122806
17	lnc-GPR85-1	chr7:112715179-112717236	NONHSAT122812
18	lnc-AC073348.1-1	chr7:112785718-112785964	NONHSAT122814
19	lnc-AC073348.1-1	chr7:112747810-112747859	ENSG00000225457.1
20	lnc-C7orf60-1	chr7:112626594-112626719	NONHSAT122810
21	lnc-C7orf60-1	chr7:112635623-112635698	NONHSAT122805
22	lnc-C7orf60-1	chr7:112635623-112635712	NONHSAT122810
23	lnc-AC073348.1-1	chr7:112785718-112786095	ENSG00000225457.1
24	lnc-C7orf60-1	chr7:112626591-112626719	NONHSAT122805
25	lnc-C7orf60-1	chr7:112626591-112626719	ENSG00000234520
26	lnc-AC073348.1-1	chr7:112786095-112786385	ENSG00000225457.1

No data

Variant related genes	Relation type
ENSG00000270997	TF binding region
ENSG00000225457	TF binding region
GPR85	TF binding region
ENSG00000234520	TF binding region
LINC00998	TF binding region
ENSG00000236294	TF binding region
ENSG00000270997	CpG island
ENSG00000225457	CpG island
GPR85	CpG island
ENSG00000234520	CpG island
LINC00998	CpG island
ENSG00000236294	CpG island
ENSG00000265688	chromatin interactions
ENSG00000136247	chromatin interactions
ENSG00000214194	chromatin interactions
ENSG00000006652	chromatin interactions
ENSG00000270997	chromatin interactions
ENSG00000236294	chromatin interactions
ENSG00000225457	chromatin interactions
ENSG00000164603	chromatin interactions
ENSG00000164604	chromatin interactions

Extended variants
information (count: 10915 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:10915 , 50 per page) page: 1 2 3 4 5 6 7 ... 219

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs201380862	chr7:112620696-112620697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs538618683	chr7:112620984-112620985	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
3	rs565993743	chr7:112621019-112621020	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
4	rs557328511	chr7:112621038-112621039	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
5	rs575601907	chr7:112621071-112621072	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
6	rs536106248	chr7:112621106-112621107	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
7	rs7808668	chr7:112621155-112621156	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
8	rs7808925	chr7:112621240-112621241	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs189443428	chr7:112621263-112621264	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs7776768	chr7:112621332-112621333	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs576859869	chr7:112621352-112621353	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs544188696	chr7:112621387-112621388	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs562888133	chr7:112621411-112621412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs143596948	chr7:112621430-112621431	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs542120157	chr7:112621564-112621565	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs570407864	chr7:112621573-112621574	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs542958438	chr7:112621574-112621575	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs111878606	chr7:112621597-112621598	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs527855544	chr7:112621622-112621623	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs36198903	chr7:112621634-112621635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs7796243	chr7:112621668-112621669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs569811092	chr7:112621697-112621698	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs13233067	chr7:112621708-112621709	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs13247239	chr7:112621709-112621710	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs28418585	chr7:112621719-112621720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs71524852	chr7:112621722-112621723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs71155082	chr7:112621726-112621727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs571349952	chr7:112621774-112621775	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs10953723	chr7:112621777-112621778	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs550592867	chr7:112621789-112621790	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs11560333	chr7:112621822-112621823	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs536561400	chr7:112621838-112621839	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs370114397	chr7:112621858-112621859	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs186235903	chr7:112621862-112621863	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs60280666	chr7:112621863-112621864	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs28548866	chr7:112621864-112621865	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs59269049	chr7:112621866-112621867	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs558663634	chr7:112621868-112621869	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs185735227	chr7:112621895-112621896	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs61680362	chr7:112621897-112621898	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs556146262	chr7:112621965-112621966	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs574709816	chr7:112621968-112621969	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs542533387	chr7:112621993-112621994	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs375319119	chr7:112621998-112621999	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs75854294	chr7:112622141-112622142	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs201507960	chr7:112622154-112622155	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs190103666	chr7:112622203-112622204	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs565020668	chr7:112622207-112622208	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs183108870	chr7:112622246-112622247	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs550656612	chr7:112622247-112622248	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Myelofibrosis	22110671	CNVD
Squamous cell cancer	20885788	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	16397240	CNVD
Biliary cancer	19435499	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	23792589	CNVD
Adenocarcinoma	21044232	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Autism	19401682	CNVD
Non-small cell lung cancer	19889201	CNVD
Acute myeloid leukemia	18000384	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Metastatic melanoma	18483359	CNVD
Autism	18414403	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Melanoma	19188590	CNVD
small cell lung cancer	20016488	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Chordoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1866 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:112594200-112630400	Weak transcription	Left Ventricle	heart
2	chr7:112621800-112622000	Enhancers	Primary B cells from cord blood	blood
3	chr7:112622000-112622200	Enhancers	GM12878-XiMat	blood
4	chr7:112622000-112622600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr7:112622000-112622600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr7:112622000-112622600	Enhancers	Fetal Heart	heart
7	chr7:112622000-112622600	Enhancers	Osteobl	bone
8	chr7:112622000-112622800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr7:112622000-112622800	Enhancers	Muscle Satellite Cultured Cells	--
10	chr7:112622000-112623200	Flanking Active TSS	Primary B cells from cord blood	blood
11	chr7:112622200-112622400	Active TSS	Duodenum Smooth Muscle	Duodenum
12	chr7:112622200-112622600	Flanking Active TSS	GM12878-XiMat	blood
13	chr7:112622200-112622600	Enhancers	HSMM	muscle
14	chr7:112622200-112622600	Enhancers	HSMMtube	muscle
15	chr7:112622200-112624000	Enhancers	Primary B cells from peripheral blood	blood
16	chr7:112622400-112627800	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr7:112622600-112623000	Weak transcription	HSMM	muscle
18	chr7:112622600-112624000	Enhancers	GM12878-XiMat	blood
19	chr7:112622600-112625000	Weak transcription	Fetal Heart	heart
20	chr7:112622600-112625000	Weak transcription	Osteobl	bone
21	chr7:112622600-112625400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr7:112622600-112625600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr7:112622600-112625600	Weak transcription	HSMMtube	muscle
24	chr7:112622800-112623800	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr7:112622800-112625200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr7:112623000-112623200	Enhancers	HSMM	muscle
27	chr7:112623200-112625000	Enhancers	Primary B cells from cord blood	blood
28	chr7:112623200-112625600	Weak transcription	HSMM	muscle
29	chr7:112623800-112624000	Enhancers	Muscle Satellite Cultured Cells	--
30	chr7:112623800-112624600	Enhancers	HMEC	breast
31	chr7:112624000-112624400	Weak transcription	Muscle Satellite Cultured Cells	--
32	chr7:112624000-112625800	Weak transcription	Primary B cells from peripheral blood	blood
33	chr7:112624400-112625600	Enhancers	Muscle Satellite Cultured Cells	--
34	chr7:112624600-112625000	Weak transcription	HMEC	breast
35	chr7:112625000-112625600	Enhancers	Osteobl	bone
36	chr7:112625000-112626000	Weak transcription	Primary B cells from cord blood	blood
37	chr7:112625000-112626800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr7:112625000-112629000	Enhancers	HMEC	breast
39	chr7:112625000-112631200	Enhancers	Fetal Heart	heart
40	chr7:112625200-112625600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr7:112625200-112625600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr7:112625200-112626800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr7:112625200-112626800	Enhancers	NHEK	skin
44	chr7:112625400-112626200	Enhancers	iPS-15b Cell Line	embryonic stem cell
45	chr7:112625400-112626200	Active TSS	Colon Smooth Muscle	Colon
46	chr7:112625400-112626400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr7:112625400-112626400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr7:112625600-112625800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
49	chr7:112625600-112625800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr7:112625600-112625800	Active TSS	NH-A	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links