Variant report

Variant	esv3439224
Chromosome Location	chr3:195612455-195616953
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:147)
CpG islands
(count:915)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:147 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF3	chr3:195613505-195613734	K562	blood:	n/a	n/a
2	BCL3	chr3:195613672-195614060	GM12878	blood:	n/a	n/a
3	BCL3	chr3:195614497-195615042	GM12878	blood:	n/a	n/a
4	BCL3	chr3:195614441-195615097	GM12878	blood:	n/a	n/a
5	BHLHE40	chr3:195613371-195613992	K562	blood:	n/a	chr3:195613625-195613646
6	BRCA1	chr3:195615571-195615583	GM12878	blood:	n/a	n/a
7	CBX3	chr3:195613409-195614045	K562	blood:	n/a	n/a
8	CCNT2	chr3:195613544-195614040	K562	blood:	n/a	n/a
9	CCNT2	chr3:195614646-195614669	K562	blood:	n/a	n/a
10	CEBPD	chr3:195613299-195613927	K562	blood:	n/a	n/a
11	CEBPD	chr3:195613412-195613862	K562	blood:	n/a	n/a
12	CHD2	chr3:195616622-195616898	H1-hESC	embryonic stem cell:	n/a	n/a
13	CTCF	chr3:195614668-195614844	GM19239	blood:	n/a	n/a
14	CTCF	chr3:195616900-195617179	H1-hESC	embryonic stem cell:	n/a	n/a
15	CTCF	chr3:195614776-195614817	MCF-7	breast:	n/a	n/a
16	CTCF	chr3:195616880-195617030	GM12871	blood:	n/a	n/a
17	CTCF	chr3:195616809-195617408	HCT-116	colon:	n/a	n/a
18	CTCF	chr3:195614780-195614803	MCF-7	breast:	n/a	n/a
19	CTCF	chr3:195616920-195617070	HPF	lung:	n/a	n/a
20	CTCF	chr3:195616928-195617251	K562	blood:	n/a	n/a
21	CTCF	chr3:195616940-195617090	GM12875	blood:	n/a	n/a
22	CTCF	chr3:195616927-195617401	K562	blood:	n/a	n/a
23	CTCF	chr3:195614741-195614852	MCF-7	breast:	n/a	n/a
24	E2F6	chr3:195613487-195613731	K562	blood:	n/a	n/a
25	E2F6	chr3:195613411-195614102	K562	blood:	n/a	n/a
26	E2F6	chr3:195613557-195613664	K562	blood:	n/a	n/a
27	E2F6	chr3:195613796-195614043	K562	blood:	n/a	n/a
28	EGR1	chr3:195613652-195614025	K562	blood:	n/a	chr3:195614016-195614023
29	EP300	chr3:195613527-195613791	K562	blood:	n/a	chr3:195613615-195613631
30	EP300	chr3:195611548-195612670	ECC-1	luminal epithelium:	n/a	n/a
31	FOS	chr3:195613096-195613488	MCF10A-Er-Src	breast:	n/a	chr3:195613316-195613327
32	FOS	chr3:195613001-195613535	HUVEC	blood vessel:	n/a	chr3:195613316-195613327
33	FOS	chr3:195613229-195613385	MCF10A-Er-Src	breast:	n/a	chr3:195613316-195613327
34	FOXP2	chr3:195613303-195613695	PFSK-1	brain:	n/a	n/a
35	GABPA	chr3:195616702-195617215	H1-hESC	embryonic stem cell:	n/a	n/a
36	GABPA	chr3:195613531-195613784	K562	blood:	n/a	n/a
37	GABPA	chr3:195613414-195613785	K562	blood:	n/a	n/a
38	GATA1	chr3:195613453-195614010	K562	blood:	n/a	n/a
39	GATA2	chr3:195613417-195613806	K562	blood:	n/a	n/a
40	GATA2	chr3:195613075-195613575	HUVEC	blood vessel:	n/a	chr3:195613321-195613330 chr3:195613276-195613286
41	HDAC2	chr3:195613537-195613765	K562	blood:	n/a	n/a
42	HMGN3	chr3:195616714-195616937	K562	blood:	n/a	n/a
43	HMGN3	chr3:195612506-195612508	K562	blood:	n/a	n/a
44	HMGN3	chr3:195614723-195614888	K562	blood:	n/a	n/a
45	HMGN3	chr3:195613486-195614009	K562	blood:	n/a	n/a
46	JUND	chr3:195613573-195613697	K562	blood:	n/a	n/a
47	MAX	chr3:195613485-195613723	K562	blood:	n/a	chr3:195613630-195613641
48	MAX	chr3:195613362-195614124	K562	blood:	n/a	chr3:195613937-195613944 chr3:195613630-195613641
49	MAX	chr3:195613435-195613807	K562	blood:	n/a	chr3:195613630-195613641
50	MAX	chr3:195613813-195614044	K562	blood:	n/a	chr3:195613937-195613944

(count:915 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:195614059-195614109	HRE	kidney:	n/a
2	chr3:195613212-195613262	HNPCEpiC	eye:	n/a
3	chr3:195613212-195613262	NT2-D1	testis:	n/a
4	chr3:195615386-195615436	PrEC	prostate:	n/a
5	chr3:195615359-195615409	SAEC	small airway:	n/a
6	chr3:195614967-195615017	Hela-S3	cervix:	n/a
7	chr3:195616294-195616344	HEEpiC	esophagus:	n/a
8	chr3:195616361-195616411	HCT-116	colon:	n/a
9	chr3:195615386-195615436	Hepatocyte	liver:	n/a
10	chr3:195613212-195613262	MCF10A-Er-Src	breast:	n/a
11	chr3:195614059-195614109	SKMC	muscle:	n/a
12	chr3:195615626-195615676	AG04450	lung:	fetal
13	chr3:195613589-195613639	ProgFib	skin:	n/a
14	chr3:195615726-195615776	Hela-S3	cervix:	n/a
15	chr3:195615302-195615352	AG09319	gingival:	n/a
16	chr3:195613739-195613789	HEK293	kidney:	embryo
17	chr3:195616294-195616344	ovcar-3	ovarian:	n/a
18	chr3:195616361-195616411	NT2-D1	testis:	n/a
19	chr3:195613589-195613639	HCF	heart:	n/a
20	chr3:195616361-195616411	HIPEpiC	eye:	n/a
21	chr3:195615302-195615352	A549	lung:	n/a
22	chr3:195615577-195615627	SAEC	small airway:	n/a
23	chr3:195616328-195616378	NB4	blood:	n/a
24	chr3:195615359-195615409	NT2-D1	testis:	n/a
25	chr3:195614967-195615017	LNCaP	prostate:	n/a
26	chr3:195615577-195615627	HPAEpiC	pulmonary alveolar:	n/a
27	chr3:195616328-195616378	HRCEpiC	kidney:	n/a
28	chr3:195615302-195615352	HRE	kidney:	n/a
29	chr3:195613641-195613691	HRCEpiC	kidney:	n/a
30	chr3:195613589-195613639	ECC-1	luminal epithelium:	n/a
31	chr3:195616294-195616344	Hela-S3	cervix:	n/a
32	chr3:195616328-195616378	SK-N-SH	brain:	n/a
33	chr3:195615386-195615436	RPTEC	kidney:	n/a
34	chr3:195613212-195613262	LNCaP	prostate:	n/a
35	chr3:195615359-195615409	PFSK-1	brain:	n/a
36	chr3:195615726-195615776	PrEC	prostate:	n/a
37	chr3:195613212-195613262	SKMC	muscle:	n/a
38	chr3:195615626-195615676	HCPEpiC	choroid plexus:	n/a
39	chr3:195616361-195616411	HRCEpiC	kidney:	n/a
40	chr3:195615386-195615436	AG04449	skin:	fetal
41	chr3:195614967-195615017	SK-N-MC	brain:	n/a
42	chr3:195615626-195615676	PFSK-1	brain:	n/a
43	chr3:195615726-195615776	GM19239	blood:	n/a
44	chr3:195613739-195613789	Caco-2	colon:	n/a
45	chr3:195616361-195616411	HAEpiC	amniotic membrane:	n/a
46	chr3:195615577-195615627	HEEpiC	esophagus:	n/a
47	chr3:195615386-195615436	ovcar-3	ovarian:	n/a
48	chr3:195615626-195615676	IMR90	lung:	fetal
49	chr3:195615359-195615409	HPAEpiC	pulmonary alveolar:	n/a
50	chr3:195616328-195616378	ovcar-3	ovarian:	n/a

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:195612044..195614541-chr3:195621690..195623267,2	MCF-7	breast:
2	chr3:195614947..195618146-chr3:195619522..195621425,3	MCF-7	breast:
3	chr3:195616419..195618591-chr3:195639117..195642000,2	MCF-7	breast:
4	chr3:195593459..195596956-chr3:195614429..195619144,4	MCF-7	breast:
5	chr3:195603822..195606667-chr3:195616308..195620000,3	MCF-7	breast:
6	chr3:195611647..195613780-chr3:195614344..195617178,3	MCF-7	breast:
7	chr3:195615420..195617360-chr3:195618716..195622167,3	MCF-7	breast:
8	chr3:195611647..195613780-chr3:195614344..195617178,3	MCF-7	breast:

No data

Variant related genes	Relation type
TNK2	TF binding region
TNK2	CpG island
ENSG00000273009	chromatin interactions
ENSG00000061938	chromatin interactions

Extended variants
information (count: 297 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:297 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs572227920	chr3:195612455-195612456	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs143433872	chr3:195612460-195612461	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs564033691	chr3:195612531-195612532	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs531441305	chr3:195612534-195612535	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs552811014	chr3:195612555-195612556	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs549853389	chr3:195612566-195612567	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs561761958	chr3:195612586-195612587	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs190440974	chr3:195612596-195612597	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs148016583	chr3:195612606-195612607	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs566389981	chr3:195612623-195612624	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs532824934	chr3:195612639-195612640	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs539716999	chr3:195612646-195612647	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs551370941	chr3:195612658-195612659	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs183429318	chr3:195612659-195612660	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs574349613	chr3:195612669-195612670	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs547792734	chr3:195612707-195612708	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs373074503	chr3:195612733-195612734	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs541551091	chr3:195612759-195612760	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs565907557	chr3:195612761-195612762	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs187380252	chr3:195612768-195612769	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs535669719	chr3:195612773-195612774	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs139465714	chr3:195612816-195612817	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs553660614	chr3:195612823-195612824	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs530239684	chr3:195612832-195612833	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs546076454	chr3:195612844-195612845	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs564072227	chr3:195612891-195612892	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs576150640	chr3:195612894-195612895	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs543430667	chr3:195612908-195612909	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs561853829	chr3:195612909-195612910	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs528958265	chr3:195612918-195612919	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs11918909	chr3:195612938-195612939	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs559655937	chr3:195612955-195612956	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs12106975	chr3:195613020-195613021	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs557205284	chr3:195613041-195613042	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs537570973	chr3:195613058-195613059	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs145961208	chr3:195613072-195613073	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs548946284	chr3:195613073-195613074	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs190800551	chr3:195613098-195613099	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs561350403	chr3:195613101-195613102	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs534778121	chr3:195613169-195613170	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs553938889	chr3:195613213-195613214	Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs116823120	chr3:195613268-195613269	Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs558123291	chr3:195613298-195613299	Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs576387697	chr3:195613346-195613347	Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs543469447	chr3:195613397-195613398	Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs28448757	chr3:195613439-195613440	Enhancers Genic enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs555034897	chr3:195613512-195613513	Enhancers Genic enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs573696491	chr3:195613513-195613514	Enhancers Genic enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs540723147	chr3:195613514-195613515	Enhancers Genic enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs559395960	chr3:195613531-195613532	Enhancers Genic enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	21115979	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	16608533	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Breast cancer	17133270	CNVD
Cancer	16751803	CNVD
abnormal development	18461090	CNVD
Autism	19653912	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Prostate cancer	18632612	CNVD
Cervical cancer	21062161	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Austim spectrum disorder	21302340	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	16397240	CNVD
Epilepsy	20736978	CNVD
Mental retardation	20736978	CNVD
speech impairment	20736978	CNVD
Intracranial aneurysm	16715129	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Mental retardation	17124404	CNVD
Congenital anomalies of the kidney and urinary tract	20299530	CNVD
Developmental delay	21147756	CNVD
Breast cancer	21509527	CNVD
Cancer	21129771	CNVD
Myelofibrosis	22110671	CNVD
Neurodevelopmental disorder	16760732	CNVD
Schizophrenia	22118685	CNVD
Schizophrenia	22958593	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	20970697	CNVD
Mental retardation	19951919	CNVD
Autism	20970697	CNVD
Developmental delay	18471269	CNVD
Intellectual disability	22045946	CNVD
Breast cancer	21045282	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Ovarian cancer	20844748	CNVD
Adenocarcinoma	19607727	CNVD
Squamous cell cancer	19607727	CNVD
Uveal melanoma	20484589	CNVD
3q29 microdeletion syndrome	20500065	CNVD
Biliary cancer	20453639	CNVD
3q29 microdeletion syndrome	22283845	CNVD
3q29 microdeletion syndrome	21626679	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Ovarian cancer	21720365	CNVD
Breast cancer	21364760	CNVD
Urothelial carcinoma	21177765	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:451 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:195589400-195621800	Weak transcription	Small Intestine	intestine
2	chr3:195589800-195616200	Strong transcription	Primary neutrophils fromperipheralblood	blood
3	chr3:195589800-195618800	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr3:195589800-195619600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
5	chr3:195590000-195615600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
6	chr3:195590200-195615800	Strong transcription	Primary monocytes fromperipheralblood	blood
7	chr3:195590600-195617000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr3:195592200-195615800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr3:195592200-195616200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr3:195595600-195618800	Weak transcription	Fetal Kidney	kidney
11	chr3:195601200-195614600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr3:195602600-195616000	Weak transcription	Fetal Brain Male	brain
13	chr3:195602600-195616800	Strong transcription	Primary B cells from peripheral blood	blood
14	chr3:195604800-195617000	Strong transcription	Monocytes-CD14+_RO01746	blood
15	chr3:195604800-195621600	Weak transcription	A549	lung
16	chr3:195605200-195615400	Strong transcription	Primary T cells fromperipheralblood	blood
17	chr3:195605600-195616000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr3:195605600-195620000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
19	chr3:195606400-195621000	Weak transcription	Hela-S3	cervix
20	chr3:195606600-195620600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
21	chr3:195607000-195612800	Weak transcription	HUES64 Cell Line	embryonic stem cell
22	chr3:195607200-195612600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr3:195607200-195613000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
24	chr3:195607200-195613000	Strong transcription	Cortex derived primary cultured neurospheres	brain
25	chr3:195607200-195614000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
26	chr3:195607200-195616600	Weak transcription	Rectal Smooth Muscle	rectum
27	chr3:195608000-195615600	Strong transcription	Thymus	Thymus
28	chr3:195608200-195613000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr3:195608200-195613200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
30	chr3:195608200-195615400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
31	chr3:195608200-195615800	Strong transcription	Primary T helper cells fromperipheralblood	blood
32	chr3:195608400-195612600	Strong transcription	Brain Inferior Temporal Lobe	brain
33	chr3:195608400-195615200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
34	chr3:195608400-195615400	Strong transcription	Primary T helper cells PMA-I stimulated	--
35	chr3:195608400-195615400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr3:195608400-195615800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
37	chr3:195608600-195612600	Strong transcription	Brain Germinal Matrix	brain
38	chr3:195608600-195613200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr3:195608600-195615400	Strong transcription	Esophagus	oesophagus
40	chr3:195608600-195616000	Strong transcription	Primary T cells from cord blood	blood
41	chr3:195608800-195612800	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr3:195608800-195613400	Strong transcription	HMEC	breast
43	chr3:195608800-195615200	Strong transcription	Fetal Brain Female	brain
44	chr3:195609200-195621000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
45	chr3:195609600-195618600	Weak transcription	Colon Smooth Muscle	Colon
46	chr3:195610200-195616400	Genic enhancers	Fetal Muscle Trunk	muscle
47	chr3:195611000-195612600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
48	chr3:195611000-195612600	Weak transcription	Brain Angular Gyrus	brain
49	chr3:195611000-195614600	Weak transcription	Aorta	Aorta
50	chr3:195611000-195614600	Weak transcription	Dnd41	blood

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