Variant report

Variant rs12106975
Chromosome Location chr3:195613020-195613021
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195589400-195621800 Weak transcription Small Intestine intestine
2 chr3:195589800-195616200 Strong transcription Primary neutrophils fromperipheralblood blood
3 chr3:195589800-195618800 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr3:195589800-195619600 Strong transcription Primary hematopoietic stem cells short term culture blood
5 chr3:195590000-195615600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
6 chr3:195590200-195615800 Strong transcription Primary monocytes fromperipheralblood blood
7 chr3:195590600-195617000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr3:195592200-195615800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr3:195592200-195616200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr3:195595600-195618800 Weak transcription Fetal Kidney kidney
11 chr3:195601200-195614600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr3:195602600-195616000 Weak transcription Fetal Brain Male brain
13 chr3:195602600-195616800 Strong transcription Primary B cells from peripheral blood blood
14 chr3:195604800-195617000 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr3:195604800-195621600 Weak transcription A549 lung
16 chr3:195605200-195615400 Strong transcription Primary T cells fromperipheralblood blood
17 chr3:195605600-195616000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr3:195605600-195620000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr3:195606400-195621000 Weak transcription Hela-S3 cervix
20 chr3:195606600-195620600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr3:195607200-195614000 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr3:195607200-195616600 Weak transcription Rectal Smooth Muscle rectum
23 chr3:195608000-195615600 Strong transcription Thymus Thymus
24 chr3:195608200-195613200 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr3:195608200-195615400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr3:195608200-195615800 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr3:195608400-195615200 Strong transcription Primary T helper naive cells fromperipheralblood blood
28 chr3:195608400-195615400 Strong transcription Primary T helper cells PMA-I stimulated --
29 chr3:195608400-195615400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr3:195608400-195615800 Strong transcription Primary T regulatory cells fromperipheralblood blood
31 chr3:195608600-195613200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr3:195608600-195615400 Strong transcription Esophagus oesophagus
33 chr3:195608600-195616000 Strong transcription Primary T cells from cord blood blood
34 chr3:195608800-195613400 Strong transcription HMEC breast
35 chr3:195608800-195615200 Strong transcription Fetal Brain Female brain
36 chr3:195609200-195621000 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr3:195609600-195618600 Weak transcription Colon Smooth Muscle Colon
38 chr3:195610200-195616400 Genic enhancers Fetal Muscle Trunk muscle
39 chr3:195611000-195614600 Weak transcription Aorta Aorta
40 chr3:195611000-195614600 Weak transcription Dnd41 blood
41 chr3:195611000-195618800 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr3:195611000-195620600 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr3:195611200-195616200 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr3:195611400-195614000 Genic enhancers Placenta Placenta
45 chr3:195611600-195613400 Enhancers Colonic Mucosa Colon
46 chr3:195611600-195613400 Genic enhancers Spleen Spleen
47 chr3:195611600-195613600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr3:195611600-195613600 Genic enhancers Fetal Intestine Small intestine
49 chr3:195611600-195613600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
50 chr3:195611600-195613800 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain

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