Variant report

Variant	esv3441183
Chromosome Location	chr9:95857356-95859904
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:633)
CpG islands
(count:610)
Chromatin interactive
region (count:24)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:633 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:95857524-95857895	HepG2	liver:	n/a	n/a
2	ATF1	chr9:95857731-95858306	K562	blood:	n/a	n/a
3	ATF2	chr9:95856928-95857923	GM12878	blood:	n/a	n/a
4	ATF2	chr9:95856942-95857427	GM12878	blood:	n/a	n/a
5	ATF3	chr9:95857777-95858168	K562	blood:	n/a	chr9:95858141-95858150
6	BACH1	chr9:95858007-95858119	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr9:95858988-95859223	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr9:95857605-95857790	H1-hESC	embryonic stem cell:	n/a	n/a
9	BCL3	chr9:95857592-95858091	GM12878	blood:	n/a	chr9:95857949-95857962
10	BCLAF1	chr9:95856898-95857416	GM12878	blood:	n/a	n/a
11	BCLAF1	chr9:95857478-95858171	GM12878	blood:	n/a	chr9:95858137-95858150 chr9:95858119-95858128 chr9:95857949-95857962
12	BCLAF1	chr9:95857012-95858021	GM12878	blood:	n/a	chr9:95857949-95857962
13	BHLHE40	chr9:95858625-95858806	K562	blood:	n/a	n/a
14	BHLHE40	chr9:95856998-95858083	GM12878	blood:	n/a	chr9:95857165-95857181
15	BHLHE40	chr9:95857060-95858089	K562	blood:	n/a	chr9:95857165-95857181
16	BRCA1	chr9:95857912-95857923	HepG2	liver:	n/a	n/a
17	BRCA1	chr9:95857105-95857613	GM12878	blood:	n/a	n/a
18	BRCA1	chr9:95857704-95858049	Hela-S3	cervix:	n/a	n/a
19	CBX3	chr9:95857397-95858124	K562	blood:	n/a	n/a
20	CCNT2	chr9:95857604-95858936	K562	blood:	n/a	chr9:95858424-95858433 chr9:95858274-95858283 chr9:95858404-95858413 chr9:95858159-95858168 chr9:95858094-95858103 chr9:95858210-95858219 chr9:95858141-95858150
21	CEBPB	chr9:95857695-95858014	Hela-S3	cervix:	n/a	n/a
22	CEBPD	chr9:95858407-95858829	HepG2	liver:	n/a	n/a
23	CEBPD	chr9:95857545-95857952	HepG2	liver:	n/a	n/a
24	CEBPD	chr9:95857602-95857872	HepG2	liver:	n/a	n/a
25	CHD1	chr9:95856862-95857801	GM12878	blood:	n/a	n/a
26	CHD1	chr9:95858708-95858808	GM12878	blood:	n/a	n/a
27	CHD2	chr9:95857793-95858059	HepG2	liver:	n/a	n/a
28	CHD2	chr9:95857650-95858016	H1-hESC	embryonic stem cell:	n/a	n/a
29	CHD2	chr9:95857509-95858087	K562	blood:	n/a	n/a
30	CHD2	chr9:95856939-95858098	GM12878	blood:	n/a	n/a
31	CHD2	chr9:95857569-95858867	Hela-S3	cervix:	n/a	n/a
32	CHD2	chr9:95858880-95859064	GM12878	blood:	n/a	n/a
33	CHD2	chr9:95858436-95858636	H1-hESC	embryonic stem cell:	n/a	n/a
34	CHD2	chr9:95858307-95858624	HepG2	liver:	n/a	n/a
35	CREB1	chr9:95857596-95858506	H1-hESC	embryonic stem cell:	n/a	n/a
36	CREB1	chr9:95857183-95859262	HepG2	liver:	n/a	n/a
37	CREB1	chr9:95857519-95858854	A549	lung:	n/a	n/a
38	CREB1	chr9:95857512-95858614	K562	blood:	n/a	n/a
39	CREB1	chr9:95857757-95858747	H1-hESC	embryonic stem cell:	n/a	n/a
40	CREB1	chr9:95856893-95858595	GM12878	blood:	n/a	n/a
41	CREB1	chr9:95857737-95858336	ECC-1	luminal epithelium:	n/a	n/a
42	CTCF	chr9:95858572-95858659	MCF-7	breast:	n/a	n/a
43	CTCF	chr9:95858480-95858623	K562	blood:	n/a	n/a
44	CTCF	chr9:95858510-95858606	GM13976	blood:	n/a	n/a
45	CTCF	chr9:95857582-95857643	Pancreas_OC	pancreas:	n/a	n/a
46	CTCF	chr9:95857848-95857945	Spleen_OC	spleen:	n/a	n/a
47	CTCF	chr9:95858593-95858611	H1-hESC	embryonic stem cell:	n/a	n/a
48	CTCF	chr9:95858540-95858690	SK-N-SH_RA	brain:	n/a	n/a
49	CTCF	chr9:95858480-95858630	HUVEC	blood vessel:	n/a	n/a
50	CTCF	chr9:95858461-95858784	K562	blood:	n/a	n/a

(count:610 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:95858233-95858283	MCF10A-Er-Src	breast:	n/a
2	chr9:95859131-95859181	K562	blood:	n/a
3	chr9:95857577-95857627	RPTEC	kidney:	n/a
4	chr9:95858436-95858486	PANC-1	pancreas:	n/a
5	chr9:95858671-95858721	HNPCEpiC	eye:	n/a
6	chr9:95858257-95858307	HAEpiC	amniotic membrane:	n/a
7	chr9:95857577-95857627	HEK293	kidney:	embryo
8	chr9:95859121-95859171	GM12891	blood:	n/a
9	chr9:95859121-95859171	HRCEpiC	kidney:	n/a
10	chr9:95858257-95858307	SKMC	muscle:	n/a
11	chr9:95859131-95859181	HRE	kidney:	n/a
12	chr9:95859189-95859239	CMK	blood:	n/a
13	chr9:95859131-95859181	SK-N-SH_RA	brain:	n/a
14	chr9:95858233-95858283	HL-60	blood:	n/a
15	chr9:95858233-95858283	CMK	blood:	n/a
16	chr9:95859121-95859171	HMEC	breast:	n/a
17	chr9:95858233-95858283	BJ	skin:	n/a
18	chr9:95859189-95859239	HNPCEpiC	eye:	n/a
19	chr9:95858233-95858283	HCT-116	colon:	n/a
20	chr9:95857577-95857627	HAEpiC	amniotic membrane:	n/a
21	chr9:95859131-95859181	Caco-2	colon:	n/a
22	chr9:95858671-95858721	SK-N-MC	brain:	n/a
23	chr9:95859131-95859181	GM06990	blood:	n/a
24	chr9:95857577-95857627	SK-N-MC	brain:	n/a
25	chr9:95858671-95858721	IMR90	lung:	fetal
26	chr9:95858436-95858486	HEK293	kidney:	embryo
27	chr9:95859189-95859239	HRPEpiC	eye:	n/a
28	chr9:95858523-95858573	HRCEpiC	kidney:	n/a
29	chr9:95858671-95858721	HRPEpiC	eye:	n/a
30	chr9:95858233-95858283	H1-hESC	embryonic stem cell:	embryo
31	chr9:95858257-95858307	GM12892	blood:	n/a
32	chr9:95857704-95857754	NH-A	brain:	n/a
33	chr9:95858436-95858486	HCT-116	colon:	n/a
34	chr9:95857704-95857754	ECC-1	luminal epithelium:	n/a
35	chr9:95857577-95857627	HMEC	breast:	n/a
36	chr9:95858257-95858307	NHBE	bronchial:	n/a
37	chr9:95858436-95858486	HCPEpiC	choroid plexus:	n/a
38	chr9:95857577-95857627	HIPEpiC	eye:	n/a
39	chr9:95859131-95859181	AoSMC	blood vessel:	n/a
40	chr9:95859131-95859181	HL-60	blood:	n/a
41	chr9:95858523-95858573	Hela-S3	cervix:	n/a
42	chr9:95858257-95858307	SK-N-SH_RA	brain:	n/a
43	chr9:95857577-95857627	HCT-116	colon:	n/a
44	chr9:95859121-95859171	PrEC	prostate:	n/a
45	chr9:95858523-95858573	ECC-1	luminal epithelium:	n/a
46	chr9:95859189-95859239	HAEpiC	amniotic membrane:	n/a
47	chr9:95858233-95858283	HCM	heart:	n/a
48	chr9:95859121-95859171	MCF10A-Er-Src	breast:	n/a
49	chr9:95858257-95858307	SAEC	small airway:	n/a
50	chr9:95858523-95858573	Jurkat	blood:	n/a

(count:24 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr21:43430249..43430882-chr9:95858546..95859076,2	Hela-S3	cervix:
2	chr9:95856800..95859803-chr9:96212504..96215667,3	MCF-7	breast:
3	chr9:95856977..95859126-chr9:95888088..95890598,2	MCF-7	breast:
4	chr9:95816364..95826268-chr9:95852309..95863275,20	MCF-7	breast:
5	chr22:39715499..39716297-chr9:95857044..95857925,2	Hela-S3	cervix:
6	chr9:95858239..95860012-chr9:96214576..96216562,2	MCF-7	breast:
7	chr1:147806321..147807273-chr9:95857540..95858521,2	Hela-S3	cervix:
8	chr17:37356128..37357052-chr9:95858189..95859122,2	NB4	blood:
9	chr9:95857275..95859572-chr9:95888374..95892185,3	MCF-7	breast:
10	chr9:95857571..95862229-chr9:96211597..96216359,5	K562	blood:
11	chr20:52231451..52233410-chr9:95855807..95857476,2	MCF-7	breast:
12	chr9:95856094..95858375-chr9:96337008..96340445,3	MCF-7	breast:
13	chr9:95819521..95827100-chr9:95855273..95859349,14	K562	blood:
14	chr9:95818697..95822651-chr9:95855885..95860349,6	MCF-7	breast:
15	chr9:95855064..95861522-chr9:95867449..95872462,10	MCF-7	breast:
16	chr9:95855712..95863110-chr9:95867626..95874665,14	K562	blood:
17	chr9:95832455..95836206-chr9:95854622..95857563,3	K562	blood:
18	chr9:95819533..95824260-chr9:95855982..95859349,6	K562	blood:
19	chr9:95644477..95647026-chr9:95856409..95858869,2	MCF-7	breast:
20	chr9:95855552..95862102-chr9:95867626..95876894,17	K562	blood:
21	chr9:95855662..95862507-chr9:95894736..95899302,16	MCF-7	breast:
22	chr9:95782411..95784335-chr9:95855706..95857608,2	K562	blood:
23	chr9:95856253..95862485-chr9:95892353..95899486,12	MCF-7	breast:
24	chr9:95856307..95858930-chr9:95945344..95947454,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NINJ1-1	chr9:95857650-95857811	ENSG00000223446.1
2	lnc-NINJ1-1	chr9:95857650-95857760	NONHSAT133229
3	lnc-NINJ1-1	chr9:95857507-95857848	NONHSAT133231
4	lnc-NINJ1-1	chr9:95857650-95857848	NONHSAT133232

No data

Variant related genes	Relation type
C9orf89	TF binding region
ENSG00000223446	TF binding region
C9orf89	CpG island
ENSG00000223446	CpG island
ENSG00000108298	chromatin interactions
ENSG00000131669	chromatin interactions
ENSG00000165238	chromatin interactions
ENSG00000226668	chromatin interactions
ENSG00000100316	chromatin interactions
ENSG00000197724	chromatin interactions
ENSG00000048828	chromatin interactions
ENSG00000188938	chromatin interactions
ENSG00000165233	chromatin interactions
ENSG00000173276	chromatin interactions
ENSG00000157303	chromatin interactions
ENSG00000202408	chromatin interactions

Extended variants
information (count: 95 )
Associated
traits (count: 72 )

Variant overlapped rSNPs/rCNVs (count:95 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs536538430	chr9:95857367-95857368	Flanking Active TSS Enhancers Weak transcription Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
2	rs57522741	chr9:95857381-95857382	Flanking Active TSS Enhancers Weak transcription Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
3	rs555269033	chr9:95857410-95857411	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
4	rs576346064	chr9:95857430-95857431	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
5	rs376868378	chr9:95857447-95857448	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
6	rs77458011	chr9:95857463-95857464	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
7	rs75391472	chr9:95857466-95857467	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
8	rs576093199	chr9:95857475-95857476	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
9	rs558552542	chr9:95857476-95857477	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
10	rs189554333	chr9:95857478-95857479	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
11	rs57521074	chr9:95857484-95857485	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
12	rs541138535	chr9:95857567-95857568	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
13	rs80246510	chr9:95857620-95857621	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
14	rs527527955	chr9:95857623-95857624	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
15	rs151063289	chr9:95857632-95857633	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
16	rs561201333	chr9:95857644-95857645	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
17	rs12378451	chr9:95857650-95857651	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs549749615	chr9:95857657-95857658	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
19	rs181058274	chr9:95857667-95857668	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
20	rs60982383	chr9:95857706-95857707	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs10821067	chr9:95857720-95857721	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
22	rs566117024	chr9:95857742-95857743	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
23	rs370830416	chr9:95857778-95857779	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
24	rs115249557	chr9:95857811-95857812	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region lncRNA	12 gene(s)	Overlapped CNVs	n/a
25	rs79333489	chr9:95857825-95857826	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region lncRNA	12 gene(s)	Overlapped CNVs	n/a
26	rs537349667	chr9:95857832-95857833	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region lncRNA	12 gene(s)	Overlapped CNVs	n/a
27	rs549398956	chr9:95857866-95857867	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
28	rs558483257	chr9:95857934-95857935	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
29	rs71490596	chr9:95857936-95857937	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
30	rs10821069	chr9:95857937-95857938	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
31	rs10821070	chr9:95857959-95857960	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs574851296	chr9:95857967-95857968	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
33	rs542777209	chr9:95857978-95857979	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
34	rs113243795	chr9:95857987-95857988	Weak transcription Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
35	rs543456961	chr9:95858057-95858058	Weak transcription Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
36	rs76094312	chr9:95858059-95858060	Weak transcription Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
37	rs556018934	chr9:95858076-95858077	Weak transcription Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
38	rs115317746	chr9:95858077-95858078	Weak transcription Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
39	rs150817847	chr9:95858154-95858155	Weak transcription Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
40	rs75772702	chr9:95858156-95858157	Weak transcription Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
41	rs71364354	chr9:95858157-95858158	Weak transcription Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
42	rs576245117	chr9:95858193-95858194	Weak transcription Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
43	rs543777243	chr9:95858278-95858279	Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
44	rs192416799	chr9:95858337-95858338	Weak transcription Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
45	rs532171609	chr9:95858374-95858375	Weak transcription Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
46	rs142145607	chr9:95858377-95858378	Weak transcription Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
47	rs559367612	chr9:95858384-95858385	Weak transcription Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
48	rs529775135	chr9:95858391-95858392	Weak transcription Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
49	rs548719471	chr9:95858508-95858509	Weak transcription Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
50	rs570166980	chr9:95858525-95858526	Weak transcription Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:72)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Biliary cancer	19435499	CNVD
small cell lung cancer	20016488	CNVD
Intracranial aneurysm	16715129	CNVD
Cardiac fibroma	18329553	CNVD
Mental retardation	21693067	CNVD
Breast cancer	17133270	CNVD
Basal cell nevus syndrome	21572526	CNVD
Mental retardation	19951919	CNVD
Retinoblastoma	22278416	CNVD
9q22.3 microdeletion syndrome	22283845	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Microcephaly	18830227	CNVD
overgrowth syndrome	16570072	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:497 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:95834400-95857400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr9:95849400-95857400	Weak transcription	Ovary	ovary
3	chr9:95854000-95857400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr9:95854000-95857400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr9:95854400-95857400	Enhancers	Primary hematopoietic stem cells	blood
6	chr9:95854400-95857400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
7	chr9:95854400-95857400	Enhancers	Fetal Muscle Trunk	muscle
8	chr9:95854400-95857400	Enhancers	Fetal Muscle Leg	muscle
9	chr9:95854400-95857400	Enhancers	Placenta	Placenta
10	chr9:95854600-95857400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr9:95854600-95857400	Enhancers	Fetal Thymus	thymus
12	chr9:95854600-95857400	Weak transcription	NHDF-Ad	bronchial
13	chr9:95854600-95857800	Enhancers	Sigmoid Colon	Sigmoid Colon
14	chr9:95854800-95857400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr9:95854800-95857400	Enhancers	Fetal Intestine Large	intestine
16	chr9:95854800-95857400	Weak transcription	NH-A	brain
17	chr9:95854800-95857800	Enhancers	Fetal Heart	heart
18	chr9:95855000-95857400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
19	chr9:95855000-95857400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
20	chr9:95855000-95857400	Enhancers	Fetal Lung	lung
21	chr9:95855000-95857400	Enhancers	Fetal Stomach	stomach
22	chr9:95855000-95857400	Enhancers	Lung	lung
23	chr9:95855000-95857400	Enhancers	Rectal Mucosa Donor 31	rectum
24	chr9:95855000-95857400	Enhancers	Right Atrium	heart
25	chr9:95855000-95857400	Weak transcription	Osteobl	bone
26	chr9:95855200-95857400	Enhancers	Fetal Intestine Small	intestine
27	chr9:95855200-95857800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
28	chr9:95855400-95857400	Enhancers	Duodenum Smooth Muscle	Duodenum
29	chr9:95855400-95857400	Enhancers	Stomach Mucosa	stomach
30	chr9:95855400-95857800	Flanking Active TSS	GM12878-XiMat	blood
31	chr9:95855600-95857400	Enhancers	Brain Anterior Caudate	brain
32	chr9:95855600-95857800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr9:95856000-95857400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
34	chr9:95856000-95857400	Enhancers	Esophagus	oesophagus
35	chr9:95856000-95857400	Enhancers	Left Ventricle	heart
36	chr9:95856000-95857400	Enhancers	Right Ventricle	heart
37	chr9:95856200-95857400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr9:95856200-95857400	Weak transcription	Cortex derived primary cultured neurospheres	brain
39	chr9:95856200-95857400	Weak transcription	Fetal Brain Female	brain
40	chr9:95856400-95857400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr9:95856400-95857400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr9:95856400-95857400	Weak transcription	Placenta Amnion	Placenta Amnion
43	chr9:95856600-95857400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr9:95856600-95857400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr9:95856600-95857400	Weak transcription	Brain Substantia Nigra	brain
46	chr9:95856800-95857400	Enhancers	Brain Cingulate Gyrus	brain
47	chr9:95856800-95857400	Enhancers	Colon Smooth Muscle	Colon
48	chr9:95856800-95857400	Flanking Active TSS	HepG2	liver
49	chr9:95856800-95857800	Flanking Active TSS	Primary B cells from peripheral blood	blood
50	chr9:95857000-95857400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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