Variant report

Variant	rs570166980
Chromosome Location	chr9:95858525-95858526
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr9:95858294-95859101	MCF-7	breast:	n/a	n/a
2	MAX	chr9:95857556-95858845	K562	blood:	n/a	chr9:95858208-95858218 chr9:95858272-95858282
3	YY1	chr9:95858385-95858788	SK-N-SH_RA	brain:	n/a	chr9:95858424-95858433
4	POLR2A	chr9:95858357-95859103	ProgFib	skin:	n/a	n/a
5	SP1	chr9:95857387-95858669	A549	lung:	n/a	chr9:95858210-95858220 chr9:95858424-95858433 chr9:95858210-95858219 chr9:95858404-95858414 chr9:95858227-95858239 chr9:95858440-95858452 chr9:95858404-95858414 chr9:95858339-95858351 chr9:95858095-95858104 chr9:95858142-95858151 chr9:95858400-95858414 chr9:95858209-95858221 chr9:95858211-95858220 chr9:95858141-95858151 chr9:95858423-95858434 chr9:95858274-95858284 chr9:95857789-95857800 chr9:95858140-95858152 chr9:95858141-95858150 chr9:95858158-95858170 chr9:95858341-95858350 chr9:95858094-95858103 chr9:95858405-95858414 chr9:95858274-95858284 chr9:95858159-95858169 chr9:95858142-95858151 chr9:95858339-95858351 chr9:95858095-95858104 chr9:95858141-95858151 chr9:95858403-95858414 chr9:95858211-95858220 chr9:95858273-95858285 chr9:95858274-95858283 chr9:95858210-95858220 chr9:95858158-95858170 chr9:95858423-95858435 chr9:95858425-95858434 chr9:95858094-95858104 chr9:95858440-95858451 chr9:95858209-95858221 chr9:95858275-95858284 chr9:95858270-95858284 chr9:95858424-95858434 chr9:95858273-95858285 chr9:95858159-95858169 chr9:95858403-95858415 chr9:95858420-95858434 chr9:95858090-95858104 chr9:95858094-95858104 chr9:95858229-95858238 chr9:95858423-95858435 chr9:95858359-95858370 chr9:95858160-95858169 chr9:95858359-95858371 chr9:95857911-95857920 chr9:95858227-95858239 chr9:95858425-95858434 chr9:95858424-95858434 chr9:95858404-95858413 chr9:95858159-95858168 chr9:95858155-95858169 chr9:95858405-95858414 chr9:95858403-95858415 chr9:95858340-95858349 chr9:95858093-95858105 chr9:95858137-95858151 chr9:95858336-95858350 chr9:95858160-95858169 chr9:95858442-95858451 chr9:95858093-95858105 chr9:95857874-95857885 chr9:95858140-95858152 chr9:95858275-95858284 chr9:95858206-95858220
6	YY1	chr9:95858366-95858789	GM12891	blood:	n/a	chr9:95858424-95858433
7	MXI1	chr9:95858480-95859031	H1-hESC	embryonic stem cell:	n/a	n/a
8	POLR2A	chr9:95858391-95858999	A549	lung:	n/a	n/a
9	POLR2A	chr9:95858355-95859151	U87	brain:	n/a	n/a
10	YY1	chr9:95858392-95858995	GM12892	blood:	n/a	chr9:95858424-95858433
11	IRF1	chr9:95857349-95858725	K562	blood:	n/a	chr9:95858209-95858223 chr9:95858403-95858417 chr9:95858423-95858437 chr9:95858158-95858172 chr9:95858339-95858353 chr9:95858093-95858107 chr9:95858273-95858287 chr9:95857874-95857888 chr9:95858140-95858154
12	EBF1	chr9:95858440-95859029	GM12878	blood:	n/a	n/a
13	POLR2A	chr9:95858386-95858687	K562	blood:	n/a	n/a
14	TAF1	chr9:95858380-95858628	SK-N-SH	brain:	n/a	n/a
15	ELF1	chr9:95857444-95858536	K562	blood:	n/a	chr9:95858163-95858175
16	MAZ	chr9:95856950-95859166	GM12878	blood:	n/a	chr9:95857476-95857486 chr9:95858208-95858218 chr9:95858272-95858282 chr9:95858894-95858904
17	POLR2A	chr9:95858305-95858733	SK-N-SH	brain:	n/a	n/a
18	RFX5	chr9:95857585-95858947	Hela-S3	cervix:	n/a	n/a
19	POLR2A	chr9:95858403-95858651	K562	blood:	n/a	n/a
20	YY1	chr9:95858383-95858799	GM12878	blood:	n/a	chr9:95858424-95858433
21	POLR2A	chr9:95856591-95859009	GM15510	blood:	n/a	n/a
22	POLR2A	chr9:95858431-95858658	H1-hESC	embryonic stem cell:	n/a	n/a
23	POLR2A	chr9:95858369-95858951	MCF10A-Er-Src	breast:	n/a	n/a
24	MAX	chr9:95858405-95859281	H1-hESC	embryonic stem cell:	n/a	chr9:95858894-95858904
25	MYC	chr9:95858452-95858652	MCF10A-Er-Src	breast:	n/a	n/a
26	POLR2A	chr9:95858400-95858711	K562	blood:	n/a	n/a
27	POLR2A	chr9:95858500-95858693	A549	lung:	n/a	n/a
28	POLR2A	chr9:95858243-95859023	HUVEC	blood vessel:	n/a	n/a
29	SP1	chr9:95857493-95858666	GM12878	blood:	n/a	chr9:95858210-95858220 chr9:95858424-95858433 chr9:95858210-95858219 chr9:95858404-95858414 chr9:95858227-95858239 chr9:95858440-95858452 chr9:95858404-95858414 chr9:95858339-95858351 chr9:95858095-95858104 chr9:95858142-95858151 chr9:95858400-95858414 chr9:95858209-95858221 chr9:95858211-95858220 chr9:95858141-95858151 chr9:95858423-95858434 chr9:95858274-95858284 chr9:95857789-95857800 chr9:95858140-95858152 chr9:95858141-95858150 chr9:95858158-95858170 chr9:95858341-95858350 chr9:95858094-95858103 chr9:95858405-95858414 chr9:95858274-95858284 chr9:95858159-95858169 chr9:95858142-95858151 chr9:95858339-95858351 chr9:95858095-95858104 chr9:95858141-95858151 chr9:95858403-95858414 chr9:95858211-95858220 chr9:95858273-95858285 chr9:95858274-95858283 chr9:95858210-95858220 chr9:95858158-95858170 chr9:95858423-95858435 chr9:95858425-95858434 chr9:95858094-95858104 chr9:95858440-95858451 chr9:95858209-95858221 chr9:95858275-95858284 chr9:95858270-95858284 chr9:95858424-95858434 chr9:95858273-95858285 chr9:95858159-95858169 chr9:95858403-95858415 chr9:95858420-95858434 chr9:95858090-95858104 chr9:95858094-95858104 chr9:95858229-95858238 chr9:95858423-95858435 chr9:95858359-95858370 chr9:95858160-95858169 chr9:95858359-95858371 chr9:95857911-95857920 chr9:95858227-95858239 chr9:95858425-95858434 chr9:95858424-95858434 chr9:95858404-95858413 chr9:95858159-95858168 chr9:95858155-95858169 chr9:95858405-95858414 chr9:95858403-95858415 chr9:95858340-95858349 chr9:95858093-95858105 chr9:95858137-95858151 chr9:95858336-95858350 chr9:95858160-95858169 chr9:95858442-95858451 chr9:95858093-95858105 chr9:95857874-95857885 chr9:95858140-95858152 chr9:95858275-95858284 chr9:95858206-95858220
30	TAF1	chr9:95858407-95858884	HepG2	liver:	n/a	n/a
31	ELF1	chr9:95856866-95858534	GM12878	blood:	n/a	chr9:95858163-95858175 chr9:95857211-95857224
32	YY1	chr9:95858382-95858763	SK-N-SH_RA	brain:	n/a	chr9:95858424-95858433
33	PAX5	chr9:95858411-95858757	GM12892	blood:	n/a	n/a
34	SP1	chr9:95857553-95858646	A549	lung:	n/a	chr9:95858210-95858220 chr9:95858424-95858433 chr9:95858210-95858219 chr9:95858404-95858414 chr9:95858227-95858239 chr9:95858440-95858452 chr9:95858404-95858414 chr9:95858339-95858351 chr9:95858095-95858104 chr9:95858142-95858151 chr9:95858400-95858414 chr9:95858209-95858221 chr9:95858211-95858220 chr9:95858141-95858151 chr9:95858423-95858434 chr9:95858274-95858284 chr9:95857789-95857800 chr9:95858140-95858152 chr9:95858141-95858150 chr9:95858158-95858170 chr9:95858341-95858350 chr9:95858094-95858103 chr9:95858405-95858414 chr9:95858274-95858284 chr9:95858159-95858169 chr9:95858142-95858151 chr9:95858339-95858351 chr9:95858095-95858104 chr9:95858141-95858151 chr9:95858403-95858414 chr9:95858211-95858220 chr9:95858273-95858285 chr9:95858274-95858283 chr9:95858210-95858220 chr9:95858158-95858170 chr9:95858423-95858435 chr9:95858425-95858434 chr9:95858094-95858104 chr9:95858440-95858451 chr9:95858209-95858221 chr9:95858275-95858284 chr9:95858270-95858284 chr9:95858424-95858434 chr9:95858273-95858285 chr9:95858159-95858169 chr9:95858403-95858415 chr9:95858420-95858434 chr9:95858090-95858104 chr9:95858094-95858104 chr9:95858229-95858238 chr9:95858423-95858435 chr9:95858359-95858370 chr9:95858160-95858169 chr9:95858359-95858371 chr9:95857911-95857920 chr9:95858227-95858239 chr9:95858425-95858434 chr9:95858424-95858434 chr9:95858404-95858413 chr9:95858159-95858168 chr9:95858155-95858169 chr9:95858405-95858414 chr9:95858403-95858415 chr9:95858340-95858349 chr9:95858093-95858105 chr9:95858137-95858151 chr9:95858336-95858350 chr9:95858160-95858169 chr9:95858442-95858451 chr9:95858093-95858105 chr9:95857874-95857885 chr9:95858140-95858152 chr9:95858275-95858284 chr9:95858206-95858220
35	TBP	chr9:95857017-95858664	K562	blood:	n/a	n/a
36	GABPA	chr9:95857455-95858604	MCF-7	breast:	n/a	chr9:95857892-95857901 chr9:95858210-95858219 chr9:95858274-95858283 chr9:95858393-95858402 chr9:95857845-95857854 chr9:95858141-95858150 chr9:95858424-95858433
37	HDAC2	chr9:95858395-95858761	HepG2	liver:	n/a	n/a
38	SIN3A	chr9:95858455-95858880	GM12878	blood:	n/a	chr9:95858485-95858498
39	MYC	chr9:95858466-95858751	K562	blood:	n/a	n/a
40	CTCF	chr9:95858480-95858630	AG04449	skin:	n/a	n/a
41	POLR2A	chr9:95856431-95858781	GM19099	blood:	n/a	n/a
42	CREB1	chr9:95857183-95859262	HepG2	liver:	n/a	n/a
43	POLR2A	chr9:95858417-95858830	A549	lung:	n/a	n/a
44	ESRRA	chr9:95856588-95859429	GM12878	blood:	n/a	chr9:95858752-95858764 chr9:95858752-95858762 chr9:95859336-95859355 chr9:95858748-95858764 chr9:95858744-95858763 chr9:95857976-95857989 chr9:95856813-95856827
45	YY1	chr9:95858450-95858793	H1-hESC	embryonic stem cell:	n/a	n/a
46	POLR2A	chr9:95858368-95858742	HepG2	liver:	n/a	n/a
47	NRF1	chr9:95858329-95858654	GM12878	blood:	n/a	chr9:95858393-95858402 chr9:95858424-95858433
48	POLR2A	chr9:95858468-95858605	GM12878	blood:	n/a	n/a
49	POLR2A	chr9:95858454-95858854	PBDE	blood:	n/a	n/a
50	POLR2A	chr9:95858199-95858862	HUVEC	blood vessel:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:95858523-95858573	AG04449	skin:	fetal
2	chr9:95858523-95858573	AG09309	skin:	n/a
3	chr9:95858523-95858573	GM12892	blood:	n/a
4	chr9:95858523-95858573	PANC-1	pancreas:	n/a
5	chr9:95858523-95858573	AG04450	lung:	fetal
6	chr9:95858523-95858573	SK-N-SH	brain:	n/a
7	chr9:95858523-95858573	HCPEpiC	choroid plexus:	n/a
8	chr9:95858523-95858573	HRE	kidney:	n/a
9	chr9:95858523-95858573	HL-60	blood:	n/a
10	chr9:95858523-95858573	GM12891	blood:	n/a
11	chr9:95858523-95858573	SK-N-MC	brain:	n/a
12	chr9:95858523-95858573	Caco-2	colon:	n/a
13	chr9:95858523-95858573	HRCEpiC	kidney:	n/a
14	chr9:95858523-95858573	T-47D	breast:	n/a
15	chr9:95858523-95858573	ProgFib	skin:	n/a
16	chr9:95858523-95858573	H1-hESC	embryonic stem cell:	embryo
17	chr9:95858523-95858573	CMK	blood:	n/a
18	chr9:95858523-95858573	AoSMC	blood vessel:	n/a
19	chr9:95858523-95858573	HCM	heart:	n/a
20	chr9:95858523-95858573	HEK293	kidney:	embryo
21	chr9:95858523-95858573	HMEC	breast:	n/a
22	chr9:95858523-95858573	GM12878	blood:	n/a
23	chr9:95858523-95858573	PrEC	prostate:	n/a
24	chr9:95858523-95858573	K562	blood:	n/a
25	chr9:95858523-95858573	PFSK-1	brain:	n/a
26	chr9:95858523-95858573	MCF10A-Er-Src	breast:	n/a
27	chr9:95858523-95858573	Hela-S3	cervix:	n/a
28	chr9:95858523-95858573	NHBE	bronchial:	n/a
29	chr9:95858523-95858573	U87	brain:	n/a
30	chr9:95858523-95858573	HCF	heart:	n/a
31	chr9:95858523-95858573	MCF-7	breast:	n/a
32	chr9:95858523-95858573	ovcar-3	ovarian:	n/a
33	chr9:95858523-95858573	SK-N-SH_RA	brain:	n/a
34	chr9:95858523-95858573	HPAEpiC	pulmonary alveolar:	n/a
35	chr9:95858523-95858573	HEEpiC	esophagus:	n/a
36	chr9:95858523-95858573	HNPCEpiC	eye:	n/a
37	chr9:95858523-95858573	HCT-116	colon:	n/a
38	chr9:95858523-95858573	Hepatocyte	liver:	n/a
39	chr9:95858523-95858573	ECC-1	luminal epithelium:	n/a
40	chr9:95858523-95858573	HIPEpiC	eye:	n/a
41	chr9:95858523-95858573	AG10803	skin:	n/a
42	chr9:95858523-95858573	NH-A	brain:	n/a
43	chr9:95858523-95858573	SKMC	muscle:	n/a
44	chr9:95858523-95858573	SAEC	small airway:	n/a
45	chr9:95858523-95858573	HAEpiC	amniotic membrane:	n/a
46	chr9:95858523-95858573	Jurkat	blood:	n/a
47	chr9:95858523-95858573	AG09319	gingival:	n/a
48	chr9:95858523-95858573	GM19239	blood:	n/a
49	chr9:95858523-95858573	BJ	skin:	n/a
50	chr9:95858523-95858573	RPTEC	kidney:	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:95819533..95824260-chr9:95855982..95859349,6	K562	blood:
2	chr9:95855712..95863110-chr9:95867626..95874665,14	K562	blood:
3	chr9:95858239..95860012-chr9:96214576..96216562,2	MCF-7	breast:
4	chr9:95856307..95858930-chr9:95945344..95947454,2	MCF-7	breast:
5	chr9:95855662..95862507-chr9:95894736..95899302,16	MCF-7	breast:
6	chr9:95644477..95647026-chr9:95856409..95858869,2	MCF-7	breast:
7	chr9:95857571..95862229-chr9:96211597..96216359,5	K562	blood:
8	chr9:95819521..95827100-chr9:95855273..95859349,14	K562	blood:
9	chr9:95816364..95826268-chr9:95852309..95863275,20	MCF-7	breast:
10	chr17:37356128..37357052-chr9:95858189..95859122,2	NB4	blood:
11	chr9:95856977..95859126-chr9:95888088..95890598,2	MCF-7	breast:
12	chr9:95856800..95859803-chr9:96212504..96215667,3	MCF-7	breast:
13	chr9:95857275..95859572-chr9:95888374..95892185,3	MCF-7	breast:
14	chr9:95855064..95861522-chr9:95867449..95872462,10	MCF-7	breast:
15	chr9:95855552..95862102-chr9:95867626..95876894,17	K562	blood:
16	chr9:95818697..95822651-chr9:95855885..95860349,6	MCF-7	breast:
17	chr9:95856253..95862485-chr9:95892353..95899486,12	MCF-7	breast:

Variant related genes	Relation type
ENSG00000223446	TF binding region
C9orf89	TF binding region
ENSG00000223446	CpG island
C9orf89	CpG island
ENSG00000131669	Chromatin interaction
ENSG00000048828	Chromatin interaction
ENSG00000188938	Chromatin interaction
ENSG00000226668	Chromatin interaction
ENSG00000165238	Chromatin interaction
ENSG00000108298	Chromatin interaction
ENSG00000157303	Chromatin interaction
ENSG00000165233	Chromatin interaction

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526296	chr9:95708192-96030392	Enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
2	nsv1054767	chr9:95738134-95875977	Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Enhancers Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	nsv1035230	chr9:95770249-95934982	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
4	nsv893576	chr9:95789960-96158277	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
5	esv1824329	chr9:95811604-95921347	Strong transcription Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
6	nsv893577	chr9:95812707-95872216	Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
7	nsv893578	chr9:95818641-95887320	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
8	nsv893579	chr9:95855100-95923091	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
9	nsv893580	chr9:95855100-96099377	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
10	esv3438320	chr9:95856656-95859504	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
11	esv3346305	chr9:95857306-95859804	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
12	esv3441183	chr9:95857356-95859904	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:95857000-95859200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr9:95857200-95859000	Active TSS	HUES64 Cell Line	embryonic stem cell
3	chr9:95857200-95859000	Active TSS	Brain Inferior Temporal Lobe	brain
4	chr9:95857200-95859200	Active TSS	iPS-20b Cell Line	embryonic stem cell
5	chr9:95857200-95859200	Active TSS	Rectal Smooth Muscle	rectum
6	chr9:95857200-95859400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr9:95857400-95858600	Active TSS	Brain Germinal Matrix	brain
8	chr9:95857400-95858800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr9:95857400-95858800	Active TSS	Placenta Amnion	Placenta Amnion
10	chr9:95857400-95859000	Active TSS	Cortex derived primary cultured neurospheres	brain
11	chr9:95857400-95859000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr9:95857400-95859000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
13	chr9:95857400-95859000	Active TSS	Lung	lung
14	chr9:95857400-95859000	Active TSS	HSMMtube	muscle
15	chr9:95857400-95859200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr9:95857400-95859200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr9:95857400-95859200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr9:95857400-95859200	Active TSS	Brain Angular Gyrus	brain
19	chr9:95857400-95859200	Active TSS	Brain Substantia Nigra	brain
20	chr9:95857400-95859200	Active TSS	Fetal Brain Female	brain
21	chr9:95857400-95859200	Active TSS	Gastric	stomach
22	chr9:95857400-95859200	Active TSS	Psoas Muscle	Psoas
23	chr9:95857400-95859200	Active TSS	HSMM	muscle
24	chr9:95857400-95859400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr9:95857400-95859400	Active TSS	HUES48 Cell Line	embryonic stem cell
26	chr9:95857400-95859400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr9:95857400-95859400	Active TSS	Brain Anterior Caudate	brain
28	chr9:95857400-95859400	Active TSS	Pancreatic Islets	Pancreatic Islet
29	chr9:95857400-95859600	Active TSS	Ovary	ovary
30	chr9:95857400-95859800	Active TSS	H9 Cell Line	embryonic stem cell
31	chr9:95857600-95858800	Active TSS	Colonic Mucosa	Colon
32	chr9:95857600-95859000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr9:95857600-95859000	Active TSS	HUES6 Cell Line	embryonic stem cell
34	chr9:95857600-95859000	Active TSS	iPS-18 Cell Line	embryonic stem cell
35	chr9:95857600-95859000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr9:95857600-95859000	Active TSS	Primary T cells from cord blood	blood
37	chr9:95857600-95859000	Active TSS	Pancreas	Pancrea
38	chr9:95857600-95859000	Active TSS	Rectal Mucosa Donor 29	rectum
39	chr9:95857600-95859000	Active TSS	Skeletal Muscle Male	skeletal muscle
40	chr9:95857600-95859000	Active TSS	Hela-S3	cervix
41	chr9:95857600-95859000	Active TSS	K562	blood
42	chr9:95857600-95859200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr9:95857600-95859200	Active TSS	iPS-15b Cell Line	embryonic stem cell
44	chr9:95857600-95859200	Active TSS	Breast Myoepithelial Primary Cells	Breast
45	chr9:95857600-95859200	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
46	chr9:95857600-95859200	Active TSS	Primary T killer memory cells from peripheral blood	blood
47	chr9:95857600-95859200	Active TSS	Muscle Satellite Cultured Cells	--
48	chr9:95857600-95859200	Active TSS	Brain Hippocampus Middle	brain
49	chr9:95857600-95859200	Active TSS	Duodenum Mucosa	Duodenum
50	chr9:95857600-95859200	Active TSS	Duodenum Smooth Muscle	Duodenum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links