No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs552441300 |
chr19:18403853-18403854 |
Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs559364140 |
chr19:18403875-18403876 |
Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs543671393 |
chr19:18403876-18403877 |
Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs563437770 |
chr19:18403918-18403919 |
Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs114922303 |
chr19:18403943-18403944 |
Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs551352527 |
chr19:18403945-18403946 |
Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs111295411 |
chr19:18404055-18404056 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs186734851 |
chr19:18404064-18404065 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs527758698 |
chr19:18404067-18404068 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs547610409 |
chr19:18404114-18404115 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs10419232 |
chr19:18404148-18404149 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
20 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
12 |
rs536468724 |
chr19:18404186-18404187 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs550404802 |
chr19:18404190-18404191 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs368286956 |
chr19:18404223-18404224 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs539383626 |
chr19:18404341-18404342 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs558585850 |
chr19:18404363-18404364 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs140561951 |
chr19:18404393-18404394 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs74442027 |
chr19:18404437-18404438 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs554387876 |
chr19:18404479-18404480 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs574526425 |
chr19:18404514-18404515 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs543260065 |
chr19:18404533-18404534 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs563802519 |
chr19:18404538-18404539 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs563182657 |
chr19:18404551-18404552 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs576722412 |
chr19:18404556-18404557 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs150443407 |
chr19:18404573-18404574 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs537137688 |
chr19:18404650-18404651 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs372036485 |
chr19:18404653-18404654 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs527695588 |
chr19:18404665-18404666 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs547841726 |
chr19:18404680-18404681 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs60086589 |
chr19:18404718-18404719 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
31 |
rs193129919 |
chr19:18404721-18404722 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs564698297 |
chr19:18404740-18404741 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs374179206 |
chr19:18404741-18404742 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs201878760 |
chr19:18404743-18404744 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs550100357 |
chr19:18404762-18404763 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs369985013 |
chr19:18404781-18404782 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs528235188 |
chr19:18404793-18404794 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs570312684 |
chr19:18404799-18404800 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs539321162 |
chr19:18404886-18404887 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs12608474 |
chr19:18404902-18404903 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs55824062 |
chr19:18404903-18404904 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs397702680 |
chr19:18404906-18404907 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs552917654 |
chr19:18404923-18404924 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs4808779 |
chr19:18404936-18404937 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
45 |
rs149637334 |
chr19:18404940-18404941 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs554607793 |
chr19:18404941-18404942 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs568052537 |
chr19:18404972-18404973 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs535409639 |
chr19:18404997-18404998 |
Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs185778752 |
chr19:18405085-18405086 |
Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs556715193 |
chr19:18405101-18405102 |
Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|