No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs530676690 |
chr6:4078482-4078483 |
Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs147624349 |
chr6:4078489-4078490 |
Weak transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs6930491 |
chr6:4078518-4078519 |
Weak transcription
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs539830442 |
chr6:4078609-4078610 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs556724300 |
chr6:4078633-4078634 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs146263068 |
chr6:4078690-4078691 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs186925762 |
chr6:4078691-4078692 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs682063 |
chr6:4078728-4078729 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
9 |
rs555548413 |
chr6:4078733-4078734 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs650183 |
chr6:4078734-4078735 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
11 |
rs369320440 |
chr6:4078782-4078783 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs372910451 |
chr6:4078811-4078812 |
Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs191385909 |
chr6:4078812-4078813 |
Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs555759526 |
chr6:4078814-4078815 |
Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs185068115 |
chr6:4078970-4078971 |
Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs542991171 |
chr6:4079019-4079020 |
Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs78652484 |
chr6:4079036-4079037 |
Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs528997458 |
chr6:4079064-4079065 |
Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs542315228 |
chr6:4079110-4079111 |
Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs562307567 |
chr6:4079126-4079127 |
Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs527874806 |
chr6:4079138-4079139 |
Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs548145268 |
chr6:4079187-4079188 |
Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs571139970 |
chr6:4079194-4079195 |
Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs376139305 |
chr6:4079202-4079203 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs652493 |
chr6:4079210-4079211 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs550215961 |
chr6:4079237-4079238 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs570027939 |
chr6:4079248-4079249 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs13203009 |
chr6:4079250-4079251 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
29 |
rs377493266 |
chr6:4079255-4079256 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs34907568 |
chr6:4079278-4079279 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs555576706 |
chr6:4079320-4079321 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs7756630 |
chr6:4079334-4079335 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionlncRNA
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
33 |
rs534502078 |
chr6:4079372-4079373 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs13202297 |
chr6:4079378-4079379 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs557657253 |
chr6:4079385-4079386 |
Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs147974084 |
chr6:4079415-4079416 |
Enhancers Weak transcription
|
TF binding regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs112823213 |
chr6:4079511-4079512 |
Enhancers Weak transcription
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs543276694 |
chr6:4079529-4079530 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs367750182 |
chr6:4079567-4079568 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs10080424 |
chr6:4079581-4079582 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs588158 |
chr6:4079592-4079593 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
42 |
rs576670383 |
chr6:4079627-4079628 |
Enhancers Weak transcription
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs559170119 |
chr6:4079637-4079638 |
Enhancers Weak transcription
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs572631289 |
chr6:4079652-4079653 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs13202659 |
chr6:4079656-4079657 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs80018662 |
chr6:4079679-4079680 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs664839 |
chr6:4079688-4079689 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
48 |
rs533677333 |
chr6:4079696-4079697 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs550450914 |
chr6:4079721-4079722 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs201784902 |
chr6:4079730-4079731 |
Enhancers Weak transcription
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|