No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs538786992 |
chr15:52820385-52820386 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs547383056 |
chr15:52820414-52820415 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs376873990 |
chr15:52820445-52820446 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs370460859 |
chr15:52820479-52820480 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs536254843 |
chr15:52820508-52820509 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs563102056 |
chr15:52820532-52820533 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs542632649 |
chr15:52820575-52820576 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs60973956 |
chr15:52820588-52820589 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs537229116 |
chr15:52820604-52820605 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs371367222 |
chr15:52820655-52820656 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs558506164 |
chr15:52820734-52820735 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs577005131 |
chr15:52820775-52820776 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs1693512 |
chr15:52820786-52820787 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
14 |
rs28556791 |
chr15:52820812-52820813 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
15 |
rs574448673 |
chr15:52820861-52820862 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs551299923 |
chr15:52820881-52820882 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs1693513 |
chr15:52820904-52820905 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
18 |
rs368285169 |
chr15:52820919-52820920 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs370674763 |
chr15:52820949-52820950 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs531943467 |
chr15:52821030-52821031 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs550339097 |
chr15:52821064-52821065 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs565184696 |
chr15:52821079-52821080 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs375573111 |
chr15:52821097-52821098 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs532569377 |
chr15:52821100-52821101 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs28716632 |
chr15:52821125-52821126 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs550600899 |
chr15:52821140-52821141 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs113928619 |
chr15:52821146-52821147 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs1693514 |
chr15:52821162-52821163 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs546905930 |
chr15:52821256-52821257 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs565851456 |
chr15:52821260-52821261 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs12441299 |
chr15:52821303-52821304 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs536218711 |
chr15:52821336-52821337 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs548321339 |
chr15:52821360-52821361 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs569917965 |
chr15:52821398-52821399 |
Bivalent/Poised TSS Active TSS Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs533378250 |
chr15:52821424-52821425 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs1693515 |
chr15:52821514-52821515 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
37 |
rs558716466 |
chr15:52821523-52821524 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs570615849 |
chr15:52821543-52821544 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs534822953 |
chr15:52821594-52821595 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs553073018 |
chr15:52821608-52821609 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs188348279 |
chr15:52821623-52821624 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs1693516 |
chr15:52821633-52821634 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
43 |
rs556720655 |
chr15:52821655-52821656 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs180763889 |
chr15:52821685-52821686 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs530484403 |
chr15:52821716-52821717 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs565245698 |
chr15:52821751-52821752 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs532533475 |
chr15:52821789-52821790 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs541249073 |
chr15:52821807-52821808 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs62023326 |
chr15:52821860-52821861 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs367666907 |
chr15:52821960-52821961 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|