Variant report

Variant rs536254843
Chromosome Location chr15:52820508-52820509
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52818400-52822000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
2 chr15:52819400-52822000 Active TSS Brain Anterior Caudate brain
3 chr15:52819600-52820600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr15:52819600-52821000 Flanking Active TSS Adipose Nuclei Adipose
5 chr15:52819600-52821600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
6 chr15:52819600-52822000 Active TSS Brain Inferior Temporal Lobe brain
7 chr15:52819600-52822000 Active TSS Duodenum Smooth Muscle Duodenum
8 chr15:52819800-52820600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
9 chr15:52819800-52820600 Flanking Active TSS Primary hematopoietic stem cells blood
10 chr15:52819800-52820600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
11 chr15:52819800-52820600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr15:52819800-52820600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr15:52819800-52820600 Bivalent/Poised TSS Duodenum Mucosa Duodenum
14 chr15:52819800-52820600 Flanking Active TSS Dnd41 blood
15 chr15:52819800-52820800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
16 chr15:52819800-52820800 Flanking Active TSS Primary B cells from cord blood blood
17 chr15:52819800-52820800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
18 chr15:52819800-52820800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr15:52819800-52820800 Flanking Bivalent TSS/Enh Rectal Mucosa Donor 29 rectum
20 chr15:52819800-52820800 Bivalent/Poised TSS Stomach Mucosa stomach
21 chr15:52819800-52821400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
22 chr15:52819800-52822000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
23 chr15:52819800-52822000 Active TSS Brain Angular Gyrus brain
24 chr15:52819800-52822200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
25 chr15:52819800-52822200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
26 chr15:52819800-52822600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
27 chr15:52820000-52820600 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
28 chr15:52820000-52820600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
29 chr15:52820000-52820600 Active TSS Fetal Brain Male brain
30 chr15:52820000-52820600 Bivalent/Poised TSS Fetal Kidney kidney
31 chr15:52820000-52820600 Flanking Active TSS Psoas Muscle Psoas
32 chr15:52820000-52820800 Flanking Active TSS Primary T cells fromperipheralblood blood
33 chr15:52820000-52820800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
34 chr15:52820000-52820800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
35 chr15:52820000-52821400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr15:52820000-52821600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
37 chr15:52820000-52821600 Active TSS Thymus Thymus
38 chr15:52820000-52821600 Active TSS HSMMtube muscle
39 chr15:52820000-52821800 Active TSS Fetal Brain Female brain
40 chr15:52820000-52822000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr15:52820000-52822000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
42 chr15:52820000-52822000 Active TSS Right Atrium heart
43 chr15:52820000-52822000 Active TSS Right Ventricle heart
44 chr15:52820000-52822200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
45 chr15:52820000-52822200 Active TSS H9 Cell Line embryonic stem cell
46 chr15:52820000-52822400 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr15:52820200-52820600 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
48 chr15:52820200-52820600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
49 chr15:52820200-52820600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
50 chr15:52820200-52820600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links