No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs374267849 |
chr1:246945642-246945643 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs548025285 |
chr1:246945648-246945649 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs76815646 |
chr1:246945653-246945654 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs148375041 |
chr1:246945654-246945655 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs10624599 |
chr1:246945655-246945656 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs60107954 |
chr1:246945667-246945668 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
7 |
rs533316791 |
chr1:246945670-246945671 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs536803690 |
chr1:246945672-246945673 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs377309809 |
chr1:246945673-246945674 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs185420834 |
chr1:246945742-246945743 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs114333122 |
chr1:246945743-246945744 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs150506035 |
chr1:246945751-246945752 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs188435899 |
chr1:246945786-246945787 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs78670245 |
chr1:246945793-246945794 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs4244628 |
chr1:246945822-246945823 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
16 |
rs533802057 |
chr1:246945880-246945881 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs192856936 |
chr1:246945928-246945929 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs184177348 |
chr1:246945965-246945966 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs537213659 |
chr1:246946019-246946020 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs4926457 |
chr1:246946021-246946022 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
21 |
rs373962342 |
chr1:246946026-246946027 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs537736863 |
chr1:246946030-246946031 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs542756718 |
chr1:246946066-246946067 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs188117180 |
chr1:246946076-246946077 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs12410595 |
chr1:246946077-246946078 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
26 |
rs202005361 |
chr1:246946122-246946123 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs544696770 |
chr1:246946155-246946156 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs564773754 |
chr1:246946170-246946171 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs574293463 |
chr1:246946187-246946188 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs181013343 |
chr1:246946195-246946196 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs184897504 |
chr1:246946198-246946199 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs563580981 |
chr1:246946218-246946219 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs541582283 |
chr1:246946219-246946220 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs549411191 |
chr1:246946244-246946245 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs12129256 |
chr1:246946260-246946261 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs149745071 |
chr1:246946296-246946297 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs61852514 |
chr1:246946314-246946315 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs61852515 |
chr1:246946330-246946331 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs190779999 |
chr1:246946352-246946353 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs369962107 |
chr1:246946361-246946362 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs200767816 |
chr1:246946371-246946372 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs372237475 |
chr1:246946376-246946377 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs35812304 |
chr1:246946377-246946378 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs57695616 |
chr1:246946381-246946382 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs4926458 |
chr1:246946390-246946391 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs528451684 |
chr1:246946394-246946395 |
Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs551504817 |
chr1:246946420-246946421 |
Weak transcription Enhancers Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs369658231 |
chr1:246946434-246946435 |
Weak transcription Enhancers Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs111419504 |
chr1:246946440-246946441 |
Weak transcription Enhancers Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs112841668 |
chr1:246946446-246946447 |
Weak transcription Enhancers Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|