Variant report

Variant	esv3491967
Chromosome Location	chr3:105305838-105311107
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 104 )
Associated
traits (count: 56 )

Variant overlapped rSNPs/rCNVs (count:104 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs113375547	chr3:105305868-105305869	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs147393534	chr3:105305881-105305882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs71327577	chr3:105305882-105305883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs62262989	chr3:105305901-105305902	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs564330381	chr3:105305916-105305917	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs200834862	chr3:105306005-105306006	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs553638562	chr3:105306006-105306007	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs575884677	chr3:105306019-105306020	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs202024708	chr3:105306020-105306021	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs10553910	chr3:105306021-105306022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs7618325	chr3:105306023-105306024	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs36092573	chr3:105306030-105306031	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs573258829	chr3:105306060-105306061	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs540374875	chr3:105306091-105306092	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs139769672	chr3:105306152-105306153	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs376096444	chr3:105306166-105306167	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs373700555	chr3:105306167-105306168	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs201157522	chr3:105306180-105306181	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs13067536	chr3:105306181-105306182	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs28609944	chr3:105306184-105306185	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs1292861	chr3:105306233-105306234	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs368409783	chr3:105306258-105306259	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs113136919	chr3:105306288-105306289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs569483443	chr3:105306333-105306334	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs539603502	chr3:105306335-105306336	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs367577396	chr3:105306336-105306337	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs62262991	chr3:105306350-105306351	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs375411332	chr3:105306369-105306370	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs202047620	chr3:105306431-105306432	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs369761811	chr3:105306453-105306454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs544098066	chr3:105306505-105306506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs374613823	chr3:105306507-105306508	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs562472658	chr3:105306509-105306510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs113814173	chr3:105306684-105306685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs28883668	chr3:105307008-105307009	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs200895834	chr3:105307213-105307214	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs28847386	chr3:105307325-105307326	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs113822869	chr3:105307351-105307352	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs111810182	chr3:105307382-105307383	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs111510357	chr3:105307511-105307512	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs551129113	chr3:105307617-105307618	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs372648566	chr3:105307680-105307681	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs62262992	chr3:105307705-105307706	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs568877028	chr3:105307746-105307747	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs201730391	chr3:105307749-105307750	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs199920038	chr3:105307793-105307794	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs527337942	chr3:105307814-105307815	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs548843311	chr3:105307816-105307817	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs567247787	chr3:105307826-105307827	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs201143268	chr3:105307833-105307834	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:56)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Renal cell carcinoma	21668985	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Neurodevelopmental disorder	22521361	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18765545	CNVD
Developmental delay	22180640	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Myelofibrosis	22110671	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:105272200-105312800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr3:105300000-105307800	Weak transcription	HSMM	muscle

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