Variant report

Variant nsv1005102
Chromosome Location chr3:85729640-85829412
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:130 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:85720200-85730400 Weak transcription Brain Hippocampus Middle brain
2 chr3:85725200-85730400 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr3:85730200-85731400 Enhancers Brain Anterior Caudate brain
4 chr3:85730400-85731000 Enhancers Cortex derived primary cultured neurospheres brain
5 chr3:85730400-85731400 Enhancers Brain Hippocampus Middle brain
6 chr3:85731200-85731600 Enhancers Brain Angular Gyrus brain
7 chr3:85731400-85736800 Weak transcription Brain Hippocampus Middle brain
8 chr3:85747400-85748200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr3:85748200-85748800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
10 chr3:85748400-85748800 ZNF genes & repeats Brain Hippocampus Middle brain
11 chr3:85748800-85753200 Weak transcription Brain Hippocampus Middle brain
12 chr3:85751200-85753400 Enhancers HUES48 Cell Line embryonic stem cell
13 chr3:85751800-85752000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
14 chr3:85752000-85752600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr3:85752400-85753200 Enhancers HUES64 Cell Line embryonic stem cell
16 chr3:85752600-85752800 Enhancers Brain Cingulate Gyrus brain
17 chr3:85752600-85753200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
18 chr3:85752800-85753000 Enhancers Brain Angular Gyrus brain
19 chr3:85752800-85753200 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr3:85752800-85753200 Enhancers iPS-20b Cell Line embryonic stem cell
21 chr3:85753200-85753600 Enhancers Brain Hippocampus Middle brain
22 chr3:85753200-85756800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr3:85753200-85756800 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr3:85753200-85756800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr3:85753200-85757000 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr3:85753400-85754400 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr3:85753600-85753800 Enhancers Brain Angular Gyrus brain
28 chr3:85753600-85753800 Enhancers Brain Cingulate Gyrus brain
29 chr3:85753600-85758600 Weak transcription Brain Hippocampus Middle brain
30 chr3:85754400-85754800 Enhancers HUES48 Cell Line embryonic stem cell
31 chr3:85754400-85755600 Enhancers Brain Germinal Matrix brain
32 chr3:85754800-85757000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr3:85755600-85759200 Weak transcription Brain Germinal Matrix brain
34 chr3:85756800-85757400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
35 chr3:85756800-85758600 Enhancers iPS-20b Cell Line embryonic stem cell
36 chr3:85756800-85759200 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr3:85757000-85759000 Enhancers HUES48 Cell Line embryonic stem cell
38 chr3:85757000-85759200 Enhancers HUES64 Cell Line embryonic stem cell
39 chr3:85757000-85759200 Enhancers iPS-18 Cell Line embryonic stem cell
40 chr3:85757200-85758800 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr3:85757400-85757800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr3:85757600-85759000 Enhancers HUES6 Cell Line embryonic stem cell
43 chr3:85757800-85759000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr3:85758000-85758600 Enhancers Cortex derived primary cultured neurospheres brain
45 chr3:85758400-85758600 Enhancers Brain Anterior Caudate brain
46 chr3:85758600-85759000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
47 chr3:85758600-85759200 Enhancers Brain Hippocampus Middle brain
48 chr3:85758600-85759400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
49 chr3:85758600-85759400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
50 chr3:85758600-85759400 Enhancers Brain Substantia Nigra brain

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