Variant report

Variant nsv1009550
Chromosome Location chr3:109577315-109795453
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:329 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:109582800-109583200 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr3:109583000-109583800 Enhancers HUES48 Cell Line embryonic stem cell
3 chr3:109583000-109583800 Enhancers iPS-15b Cell Line embryonic stem cell
4 chr3:109583200-109584000 Enhancers ES-I3 Cell Line embryonic stem cell
5 chr3:109583200-109584000 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr3:109583200-109584200 Enhancers iPS-18 Cell Line embryonic stem cell
7 chr3:109583800-109584400 Enhancers iPS-20b Cell Line embryonic stem cell
8 chr3:109584200-109584400 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr3:109588000-109589000 Enhancers Fetal Brain Male brain
10 chr3:109588600-109589200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr3:109593600-109594400 Enhancers HMEC breast
12 chr3:109594000-109594400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr3:109594000-109594400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr3:109594200-109594600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr3:109595200-109595800 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr3:109618600-109619600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
17 chr3:109618600-109620800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr3:109618600-109621200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr3:109618600-109621200 Enhancers Primary T helper 17 cells PMA-I stimulated --
20 chr3:109618600-109621800 Enhancers Dnd41 blood
21 chr3:109618800-109619400 Enhancers iPS-18 Cell Line embryonic stem cell
22 chr3:109618800-109619400 Enhancers Primary T regulatory cells fromperipheralblood blood
23 chr3:109618800-109619600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr3:109618800-109619600 Enhancers Small Intestine intestine
25 chr3:109618800-109620400 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr3:109618800-109620400 Enhancers Primary T helper cells PMA-I stimulated --
27 chr3:109618800-109620400 Enhancers Primary T helper cells fromperipheralblood blood
28 chr3:109619000-109620000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr3:109619000-109620000 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr3:109619000-109620000 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr3:109619000-109620000 Enhancers Duodenum Mucosa Duodenum
32 chr3:109619000-109620400 Enhancers Hela-S3 cervix
33 chr3:109619000-109621000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
34 chr3:109619000-109621200 Enhancers Rectal Mucosa Donor 29 rectum
35 chr3:109619200-109620000 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr3:109619400-109620000 Enhancers Fetal Intestine Large intestine
37 chr3:109619600-109620400 Enhancers Stomach Mucosa stomach
38 chr3:109619800-109621200 Enhancers Rectal Mucosa Donor 31 rectum
39 chr3:109620000-109621200 Weak transcription Fetal Intestine Large intestine
40 chr3:109621200-109621400 Enhancers Fetal Intestine Large intestine
41 chr3:109621200-109621400 Enhancers Sigmoid Colon Sigmoid Colon
42 chr3:109621200-109621400 Enhancers Small Intestine intestine
43 chr3:109621200-109622200 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr3:109622200-109622400 Enhancers Rectal Mucosa Donor 31 rectum
45 chr3:109622200-109622400 Enhancers Sigmoid Colon Sigmoid Colon
46 chr3:109624000-109625000 ZNF genes & repeats Dnd41 blood
47 chr3:109624400-109625000 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr3:109629000-109630600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr3:109629600-109630000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr3:109630000-109642400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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