Variant report

Variant	nsv1013069
Chromosome Location	chr3:17560456-17783372
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2388)
CpG islands
(count:488)
Chromatin interactive
region (count:157)
LncRNA
region (count:24)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2388 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:17771728-17772465	K562	blood:	n/a	n/a
2	ARID3A	chr3:17631248-17631840	HepG2	liver:	n/a	n/a
3	ARID3A	chr3:17778662-17779053	K562	blood:	n/a	n/a
4	ARID3A	chr3:17782091-17782749	HepG2	liver:	n/a	n/a
5	ARID3A	chr3:17662995-17662997	K562	blood:	n/a	n/a
6	ARID3A	chr3:17782133-17782792	K562	blood:	n/a	n/a
7	ARID3A	chr3:17673539-17674340	K562	blood:	n/a	n/a
8	ARID3A	chr3:17680833-17681044	K562	blood:	n/a	n/a
9	ARID3A	chr3:17661446-17661826	HepG2	liver:	n/a	n/a
10	ARID3A	chr3:17680767-17681726	HepG2	liver:	n/a	n/a
11	ARID3A	chr3:17783068-17784784	K562	blood:	n/a	n/a
12	ARID3A	chr3:17734937-17735178	K562	blood:	n/a	n/a
13	ATF1	chr3:17594526-17594848	K562	blood:	n/a	n/a
14	ATF1	chr3:17622386-17622612	K562	blood:	n/a	n/a
15	ATF1	chr3:17673982-17674275	K562	blood:	n/a	n/a
16	ATF1	chr3:17782200-17782568	K562	blood:	n/a	n/a
17	ATF1	chr3:17771775-17772340	K562	blood:	n/a	n/a
18	ATF1	chr3:17621143-17621504	K562	blood:	n/a	n/a
19	ATF1	chr3:17734896-17735339	K562	blood:	n/a	n/a
20	ATF2	chr3:17780813-17781292	GM12878	blood:	n/a	n/a
21	ATF2	chr3:17783276-17784584	GM12878	blood:	n/a	n/a
22	ATF2	chr3:17620724-17621500	GM12878	blood:	n/a	n/a
23	ATF2	chr3:17780810-17781291	GM12878	blood:	n/a	n/a
24	ATF2	chr3:17620694-17621566	GM12878	blood:	n/a	n/a
25	ATF2	chr3:17614794-17615375	GM12878	blood:	n/a	n/a
26	ATF2	chr3:17719752-17720261	GM12878	blood:	n/a	n/a
27	ATF2	chr3:17719869-17720228	GM12878	blood:	n/a	n/a
28	ATF3	chr3:17677049-17677503	A549	lung:	n/a	n/a
29	ATF3	chr3:17680668-17681742	A549	lung:	n/a	n/a
30	ATF3	chr3:17754178-17754326	GM12878	blood:	n/a	n/a
31	ATF3	chr3:17681150-17681679	HCT-116	colon:	n/a	n/a
32	ATF3	chr3:17673904-17674346	K562	blood:	n/a	n/a
33	ATF3	chr3:17783332-17784525	A549	lung:	n/a	chr3:17784447-17784456
34	ATF3	chr3:17680608-17681751	A549	lung:	n/a	n/a
35	BACH1	chr3:17676636-17676646	H1-hESC	embryonic stem cell:	n/a	n/a
36	BACH1	chr3:17771789-17772166	K562	blood:	n/a	n/a
37	BACH1	chr3:17674103-17674135	H1-hESC	embryonic stem cell:	n/a	n/a
38	BACH1	chr3:17766940-17767054	K562	blood:	n/a	n/a
39	BACH1	chr3:17774827-17775166	K562	blood:	n/a	n/a
40	BACH1	chr3:17673982-17674292	K562	blood:	n/a	n/a
41	BATF	chr3:17719740-17720156	GM12878	blood:	n/a	chr3:17720079-17720089
42	BATF	chr3:17614896-17615289	GM12878	blood:	n/a	n/a
43	BATF	chr3:17634333-17634566	GM12878	blood:	n/a	chr3:17634457-17634468
44	BATF	chr3:17620871-17621506	GM12878	blood:	n/a	n/a
45	BATF	chr3:17614888-17615294	GM12878	blood:	n/a	n/a
46	BATF	chr3:17719836-17720148	GM12878	blood:	n/a	chr3:17720079-17720089
47	BATF	chr3:17593881-17594130	GM12878	blood:	n/a	n/a
48	BATF	chr3:17673986-17674216	GM12878	blood:	n/a	n/a
49	BATF	chr3:17697294-17697587	GM12878	blood:	n/a	n/a
50	BATF	chr3:17620850-17621493	GM12878	blood:	n/a	n/a

(count:488 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:17781888-17781938	SK-N-MC	brain:	n/a
2	chr3:17742789-17742839	NH-A	brain:	n/a
3	chr3:17666379-17666429	LNCaP	prostate:	n/a
4	chr3:17742789-17742839	BJ	skin:	n/a
5	chr3:17666379-17666429	K562	blood:	n/a
6	chr3:17680687-17680737	PrEC	prostate:	n/a
7	chr3:17782211-17782261	GM12892	blood:	n/a
8	chr3:17781888-17781938	Jurkat	blood:	n/a
9	chr3:17742212-17742262	MCF10A-Er-Src	breast:	n/a
10	chr3:17680687-17680737	HMEC	breast:	n/a
11	chr3:17666379-17666429	HUVEC	blood vessel:	n/a
12	chr3:17782211-17782261	HL-60	blood:	n/a
13	chr3:17686199-17686249	SK-N-MC	brain:	n/a
14	chr3:17742212-17742262	BJ	skin:	n/a
15	chr3:17686199-17686249	Hepatocyte	liver:	n/a
16	chr3:17781888-17781938	GM12878	blood:	n/a
17	chr3:17742789-17742839	Hela-S3	cervix:	n/a
18	chr3:17781888-17781938	ovcar-3	ovarian:	n/a
19	chr3:17686199-17686249	LNCaP	prostate:	n/a
20	chr3:17781604-17781654	HRPEpiC	eye:	n/a
21	chr3:17781604-17781654	AG04449	skin:	fetal
22	chr3:17782211-17782261	ECC-1	luminal epithelium:	n/a
23	chr3:17781604-17781654	ovcar-3	ovarian:	n/a
24	chr3:17781604-17781654	HCPEpiC	choroid plexus:	n/a
25	chr3:17782211-17782261	Caco-2	colon:	n/a
26	chr3:17742212-17742262	GM12892	blood:	n/a
27	chr3:17666379-17666429	AG09309	skin:	n/a
28	chr3:17680687-17680737	Caco-2	colon:	n/a
29	chr3:17742789-17742839	AG09309	skin:	n/a
30	chr3:17781888-17781938	HNPCEpiC	eye:	n/a
31	chr3:17686199-17686249	ovcar-3	ovarian:	n/a
32	chr3:17781888-17781938	MCF10A-Er-Src	breast:	n/a
33	chr3:17742789-17742839	T-47D	breast:	n/a
34	chr3:17742212-17742262	HRPEpiC	eye:	n/a
35	chr3:17742212-17742262	CMK	blood:	n/a
36	chr3:17742212-17742262	HRCEpiC	kidney:	n/a
37	chr3:17666379-17666429	HepG2	liver:	n/a
38	chr3:17782211-17782261	LNCaP	prostate:	n/a
39	chr3:17782211-17782261	GM12891	blood:	n/a
40	chr3:17742789-17742839	A549	lung:	n/a
41	chr3:17781604-17781654	GM12878	blood:	n/a
42	chr3:17666379-17666429	HCM	heart:	n/a
43	chr3:17742789-17742839	HNPCEpiC	eye:	n/a
44	chr3:17742212-17742262	GM19239	blood:	n/a
45	chr3:17680687-17680737	GM06990	blood:	n/a
46	chr3:17781604-17781654	Caco-2	colon:	n/a
47	chr3:17782211-17782261	H1-hESC	embryonic stem cell:	embryo
48	chr3:17742789-17742839	GM12878	blood:	n/a
49	chr3:17666379-17666429	BE2_C	brain:	n/a
50	chr3:17686199-17686249	H1-hESC	embryonic stem cell:	embryo

(count:157 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr3:17758395..17761068-chr3:17761765..17764577,2	MCF-7	breast:
2	chr3:17646023..17648164-chr3:17782827..17784866,2	MCF-7	breast:
3	chr3:17727961..17730425-chr3:17807191..17809960,2	K562	blood:
4	chr3:17644530..17646231-chr3:17650472..17652535,2	K562	blood:
5	chr3:17747018..17749976-chr3:17753011..17756693,4	MCF-7	breast:
6	chr3:17605192..17607306-chr3:17782893..17784822,2	K562	blood:
7	chr3:17472326..17472977-chr3:17727996..17728715,2	MCF-7	breast:
8	chr3:17700032..17702372-chr3:17706466..17709394,2	MCF-7	breast:
9	chr3:17774591..17777405-chr3:17778656..17782054,4	MCF-7	breast:
10	chr3:17755313..17757600-chr3:17763097..17765739,2	MCF-7	breast:
11	chr3:17727172..17729840-chr3:17781484..17784957,3	MCF-7	breast:
12	chr3:17679433..17681398-chr3:17682800..17684516,2	K562	blood:
13	chr3:17637271..17640360-chr3:17640968..17645432,4	K562	blood:
14	chr3:17686323..17687041-chr3:17852128..17852662,2	MCF-7	breast:
15	chr3:17672884..17675384-chr3:17683158..17685612,2	K562	blood:
16	chr3:17598870..17600531-chr3:17609805..17611840,2	K562	blood:
17	chr3:17661913..17664495-chr3:17666006..17668523,2	MCF-7	breast:
18	chr3:17682592..17685089-chr3:17685251..17686866,2	K562	blood:
19	chr3:17622861..17624843-chr3:17625072..17627372,2	K562	blood:
20	chr3:17563803..17565634-chr3:17567663..17570561,2	K562	blood:
21	chr12:7052711..7053315-chr3:17706486..17707010,3	Hela-S3	cervix:
22	chr3:17639679..17641354-chr3:17641645..17644689,3	MCF-7	breast:
23	chr3:17585835..17588259-chr3:17590207..17593064,3	K562	blood:
24	chr3:17748682..17751400-chr3:17752667..17754505,2	K562	blood:
25	chr3:17748459..17751783-chr3:17756414..17759059,3	K562	blood:
26	chr3:17677327..17679225-chr3:17680575..17682681,2	K562	blood:
27	chr3:17734657..17735373-chr3:17852073..17852702,2	MCF-7	breast:
28	chr3:17721696..17724606-chr3:17732689..17735501,2	K562	blood:
29	chr3:17681918..17684024-chr3:17685231..17687253,2	MCF-7	breast:
30	chr3:17585640..17587263-chr3:17782584..17784641,2	MCF-7	breast:
31	chr3:17686538..17687204-chr7:20296816..20297526,2	MCF-7	breast:
32	chr3:17721696..17724606-chr3:17732689..17735501,2	K562	blood:
33	chr3:17599124..17601817-chr3:17607605..17609394,2	K562	blood:
34	chr3:17648313..17650341-chr3:17782722..17784711,2	MCF-7	breast:
35	chr3:17775188..17777459-chr3:17782844..17784863,2	MCF-7	breast:
36	chr3:17568233..17570772-chr3:17578464..17581290,2	K562	blood:
37	chr3:17659334..17661547-chr3:17665428..17668300,2	MCF-7	breast:
38	chr3:17760207..17762271-chr3:17765982..17768096,2	K562	blood:
39	chr3:17682592..17685089-chr3:17685251..17686866,2	K562	blood:
40	chr3:17760207..17762271-chr3:17765982..17768096,2	K562	blood:
41	chr3:17574853..17577476-chr3:17578727..17581379,2	K562	blood:
42	chr3:17751695..17753389-chr3:17765736..17768612,2	K562	blood:
43	chr3:17586014..17586766-chr3:17882448..17883200,2	MCF-7	breast:
44	chr3:17568665..17570764-chr3:17576211..17578088,2	K562	blood:
45	chr3:17729939..17731943-chr3:17732995..17734878,2	MCF-7	breast:
46	chr3:17599124..17601817-chr3:17607605..17609394,2	K562	blood:
47	chr3:17726443..17728457-chr3:17731343..17734227,2	K562	blood:
48	chr3:17726957..17730197-chr3:17731343..17734171,3	K562	blood:
49	chr3:17763541..17765358-chr3:17772147..17774494,2	K562	blood:
50	chr3:17758733..17761274-chr3:17782397..17784086,2	MCF-7	breast:

(count:24 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SATB1-8	chr3:17617974-17618041	NONHSAT088553
2	lnc-SATB1-8	chr3:17627845-17628049	NONHSAT088551
3	lnc-SATB1-8	chr3:17685533-17685612	NONHSAT088556
4	lnc-PLCL2-10	chr3:17761864-17762161	l_2325_chr3:17759375-17762161_testes
5	lnc-PLCL2-10	chr3:17759376-17759614	l_2325_chr3:17759375-17762161_testes
6	lnc-SATB1-8	chr3:17627844-17627958	NONHSAT088554
7	lnc-SATB1-8	chr3:17714037-17714167	NONHSAT088555
8	lnc-SATB1-8	chr3:17617906-17618041	NONHSAT088552
9	lnc-SATB1-8	chr3:17688453-17688548	NONHSAT088556
10	lnc-SATB1-8	chr3:17665341-17665405	NONHSAT088551
11	lnc-SATB1-7	chr3:17567733-17568134	uc_483_-
12	lnc-SATB1-8	chr3:17741470-17741506	NONHSAT088552
13	lnc-SATB1-8	chr3:17616695-17616802	NONHSAT088552
14	lnc-SATB1-8	chr3:17665341-17665405	NONHSAT088553
15	lnc-SATB1-8	chr3:17627845-17628049	NONHSAT088553
16	lnc-SATB1-8	chr3:17665341-17665405	NONHSAT088554
17	lnc-SATB1-8	chr3:17664140-17664257	NONHSAT088554
18	lnc-SATB1-8	chr3:17664140-17664257	NONHSAT088553
19	lnc-SATB1-8	chr3:17664140-17664257	NONHSAT088552
20	lnc-SATB1-8	chr3:17688453-17688548	NONHSAT088552
21	lnc-SATB1-8	chr3:17664140-17664257	NONHSAT088551
22	lnc-PLCL2-9	chr3:17567733-17568134	uc_483_+
23	lnc-SATB1-8	chr3:17665341-17665405	NONHSAT088552
24	lnc-SATB1-8	chr3:17665207-17665405	NONHSAT088555

No data

Variant related genes	Relation type
TBC1D5	TF binding region
ENSG00000271841	TF binding region
ENSG00000233133	TF binding region
TBC1D5	CpG island
ENSG00000271841	CpG island
ENSG00000233133	CpG island
ENSG00000131374	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000233133	chromatin interactions
ENSG00000111678	chromatin interactions
ENSG00000271841	chromatin interactions
ENSG00000150995	chromatin interactions
ENSG00000238923	chromatin interactions
CMTM3	miRNA target sites
MED22	miRNA target sites

Extended variants
information (count: 8335 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:8335 , 50 per page) page: 1 2 3 4 5 6 7 ... 167

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs73153098	chr3:17560473-17560474	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs373600856	chr3:17560476-17560477	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs529015743	chr3:17560487-17560488	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs548481710	chr3:17560495-17560496	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs115633157	chr3:17560538-17560539	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs534147110	chr3:17560584-17560585	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs553999882	chr3:17560667-17560668	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs570819679	chr3:17560763-17560764	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs150838016	chr3:17560793-17560794	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs76110320	chr3:17560812-17560813	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs139310124	chr3:17560875-17560876	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs542343011	chr3:17560881-17560882	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs555594859	chr3:17560890-17560891	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs149555899	chr3:17560891-17560892	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs144250345	chr3:17560910-17560911	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs564329476	chr3:17560911-17560912	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs12108135	chr3:17560915-17560916	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs181817238	chr3:17560956-17560957	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs543422584	chr3:17560961-17560962	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs78438356	chr3:17560965-17560966	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs377726741	chr3:17560966-17560967	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs186126059	chr3:17561011-17561012	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs549036710	chr3:17561018-17561019	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs530260144	chr3:17561054-17561055	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs541653528	chr3:17561109-17561110	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs114254102	chr3:17561212-17561213	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs550297215	chr3:17561254-17561255	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs190631541	chr3:17561274-17561275	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs547625072	chr3:17561284-17561285	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs182820323	chr3:17561295-17561296	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs200505919	chr3:17561314-17561315	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs187108357	chr3:17561418-17561419	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs549891225	chr3:17561455-17561456	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs544181490	chr3:17561491-17561492	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs190893210	chr3:17561525-17561526	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs182949387	chr3:17561546-17561547	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs77700093	chr3:17561552-17561553	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs532725865	chr3:17561573-17561574	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs564067529	chr3:17561676-17561677	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs572580005	chr3:17561739-17561740	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs187496841	chr3:17561770-17561771	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs193264993	chr3:17561858-17561859	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs376593132	chr3:17561864-17561865	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs374284351	chr3:17561925-17561926	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs112149765	chr3:17562024-17562025	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs563458393	chr3:17562111-17562112	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs573534743	chr3:17562132-17562133	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs187524482	chr3:17562197-17562198	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs559389762	chr3:17562230-17562231	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs576436340	chr3:17562324-17562325	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Neuroblastoma	18923191	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
lymphocytic leukemia	21291569	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Esophageal cancer	20955586	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	21364760	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Breast cancer	17133270	CNVD
Ovarian cancer	21781307	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	23813976	CNVD
Bipolar disorder	19114987	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:2772 , 50 per page) page: 1 2 3 4 5 6 7 ... 56

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:17523000-17570000	Weak transcription	Spleen	Spleen
2	chr3:17530600-17587600	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr3:17534200-17561600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr3:17536400-17562600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr3:17536400-17568800	Weak transcription	GM12878-XiMat	blood
6	chr3:17536400-17574800	Weak transcription	Dnd41	blood
7	chr3:17536600-17561600	Weak transcription	Fetal Muscle Trunk	muscle
8	chr3:17536600-17562200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr3:17536600-17588000	Weak transcription	Left Ventricle	heart
10	chr3:17548600-17579200	Weak transcription	Primary hematopoietic stem cells	blood
11	chr3:17548800-17564600	Weak transcription	Primary monocytes fromperipheralblood	blood
12	chr3:17549400-17561800	Weak transcription	Small Intestine	intestine
13	chr3:17550000-17560600	Weak transcription	Fetal Lung	lung
14	chr3:17550000-17583800	Weak transcription	Primary B cells from cord blood	blood
15	chr3:17550200-17574800	Weak transcription	Primary B cells from peripheral blood	blood
16	chr3:17557200-17560800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
17	chr3:17557400-17562600	Weak transcription	Primary T helper cells PMA-I stimulated	--
18	chr3:17557600-17597200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr3:17558400-17563200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr3:17558800-17561600	Weak transcription	Rectal Smooth Muscle	rectum
21	chr3:17559000-17563400	Weak transcription	Fetal Muscle Leg	muscle
22	chr3:17559600-17560600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr3:17559600-17560600	Enhancers	Brain Substantia Nigra	brain
24	chr3:17559600-17560600	Strong transcription	Fetal Stomach	stomach
25	chr3:17559600-17560600	Enhancers	Right Ventricle	heart
26	chr3:17559600-17560800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr3:17559800-17560600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
28	chr3:17559800-17560600	Enhancers	H1 Cell Line	embryonic stem cell
29	chr3:17559800-17560600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr3:17559800-17560600	Enhancers	HUES6 Cell Line	embryonic stem cell
31	chr3:17559800-17560600	Strong transcription	Adipose Nuclei	Adipose
32	chr3:17559800-17560600	Enhancers	Brain Inferior Temporal Lobe	brain
33	chr3:17559800-17560600	Strong transcription	Duodenum Smooth Muscle	Duodenum
34	chr3:17559800-17560800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr3:17559800-17560800	Enhancers	HUES64 Cell Line	embryonic stem cell
36	chr3:17559800-17560800	Enhancers	iPS-15b Cell Line	embryonic stem cell
37	chr3:17559800-17560800	Enhancers	iPS-18 Cell Line	embryonic stem cell
38	chr3:17559800-17561000	Genic enhancers	Pancreas	Pancrea
39	chr3:17559800-17561600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr3:17560000-17560600	Enhancers	ES-I3 Cell Line	embryonic stem cell
41	chr3:17560000-17560600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr3:17560000-17560600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr3:17560000-17560600	Enhancers	Cortex derived primary cultured neurospheres	brain
44	chr3:17560000-17560600	ZNF genes & repeats	Fetal Intestine Small	intestine
45	chr3:17560000-17560600	Active TSS	Pancreatic Islets	Pancreatic Islet
46	chr3:17560000-17560600	Enhancers	Psoas Muscle	Psoas
47	chr3:17560000-17561000	Enhancers	Brain Cingulate Gyrus	brain
48	chr3:17560000-17561000	Strong transcription	Monocytes-CD14+_RO01746	blood
49	chr3:17560200-17560600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr3:17560200-17560600	Enhancers	iPS-20b Cell Line	embryonic stem cell

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