Variant report

Variant nsv1019680
Chromosome Location chr5:30292001-30431119
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:30299000-30299200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:30301800-30310200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:30310400-30310800 Enhancers HUES6 Cell Line embryonic stem cell
4 chr5:30314600-30315600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr5:30315400-30315600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr5:30337400-30337600 Enhancers Pancreas Pancrea
7 chr5:30345600-30345800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:30346000-30346400 Active TSS H1 Cell Line embryonic stem cell
9 chr5:30346000-30346400 Active TSS Cortex derived primary cultured neurospheres brain
10 chr5:30346000-30346400 Active TSS HSMM muscle
11 chr5:30346000-30346400 Active TSS NHEK skin
12 chr5:30366400-30378800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr5:30373200-30373600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr5:30373600-30376400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr5:30376400-30376800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr5:30380400-30380800 Enhancers ES-WA7 Cell Line embryonic stem cell
17 chr5:30383800-30384400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr5:30384000-30384600 Enhancers Brain Germinal Matrix brain
19 chr5:30387400-30387600 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr5:30387600-30387800 Enhancers ES-WA7 Cell Line embryonic stem cell
21 chr5:30387600-30388000 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
22 chr5:30387600-30388200 Enhancers HUES48 Cell Line embryonic stem cell
23 chr5:30387600-30388600 Enhancers iPS-18 Cell Line embryonic stem cell
24 chr5:30387800-30388200 Enhancers iPS-20b Cell Line embryonic stem cell
25 chr5:30387800-30389200 Enhancers iPS-15b Cell Line embryonic stem cell
26 chr5:30387800-30390200 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr5:30388000-30388200 Enhancers HUES64 Cell Line embryonic stem cell
28 chr5:30388000-30388600 Active TSS ES-I3 Cell Line embryonic stem cell
29 chr5:30388200-30388600 Active TSS HUES48 Cell Line embryonic stem cell
30 chr5:30388200-30388600 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr5:30388200-30388800 Enhancers HUES6 Cell Line embryonic stem cell
32 chr5:30388600-30388800 Enhancers iPS-20b Cell Line embryonic stem cell
33 chr5:30388600-30389000 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr5:30388600-30389000 Enhancers HUES48 Cell Line embryonic stem cell
35 chr5:30388600-30389400 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr5:30388600-30391200 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr5:30388800-30390000 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr5:30388800-30390200 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr5:30389000-30389200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
40 chr5:30389000-30390000 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr5:30389200-30390200 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr5:30389200-30390600 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr5:30389200-30391200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr5:30389600-30389800 Enhancers iPS-18 Cell Line embryonic stem cell
45 chr5:30390000-30390400 Enhancers HUES64 Cell Line embryonic stem cell
46 chr5:30390000-30390600 Enhancers HUES48 Cell Line embryonic stem cell
47 chr5:30390000-30390600 Enhancers HUES6 Cell Line embryonic stem cell
48 chr5:30390200-30390400 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr5:30390200-30390600 Enhancers ES-WA7 Cell Line embryonic stem cell
50 chr5:30390200-30390600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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