Variant report

Variant	nsv1022132
Chromosome Location	chr4:151162048-151183859
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:14)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:150931441..150931952-chr4:151163954..151164549,2	MCF-7	breast:
2	chr4:151175795..151178374-chr4:151178941..151181154,2	MCF-7	breast:
3	chr4:151164204..151165925-chr4:151167206..151169474,2	K562	blood:
4	chr4:150902108..150902709-chr4:151163895..151164681,3	MCF-7	breast:
5	chr4:150901784..150902609-chr4:151163740..151164514,2	K562	blood:
6	chr4:151171638..151173880-chr4:151176140..151178185,2	K562	blood:
7	chr4:151175795..151178374-chr4:151178941..151181154,2	MCF-7	breast:
8	chr4:150919580..150920110-chr4:151163967..151164510,2	MCF-7	breast:
9	chr4:150901997..150902627-chr4:151163985..151164676,2	MCF-7	breast:
10	chr4:151025634..151026244-chr4:151163788..151164708,2	MCF-7	breast:
11	chr4:151164204..151165925-chr4:151167206..151169474,2	K562	blood:
12	chr4:150920430..150921253-chr4:151163452..151164775,3	MCF-7	breast:
13	chr4:150931406..150932327-chr4:151163808..151164441,3	MCF-7	breast:
14	chr4:151171638..151173880-chr4:151176140..151178185,2	K562	blood:

No data

Extended variants
information (count: 950 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:950 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs80092147	chr4:151162105-151162106	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs78020097	chr4:151162106-151162107	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs74824948	chr4:151162107-151162108	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs574592789	chr4:151162172-151162173	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs562603141	chr4:151162251-151162252	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs576674629	chr4:151162254-151162255	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs538826077	chr4:151162279-151162280	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs541666039	chr4:151162280-151162281	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs11726631	chr4:151162393-151162394	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs572710002	chr4:151162407-151162408	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs576884731	chr4:151162409-151162410	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs543866005	chr4:151162417-151162418	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs541518259	chr4:151162474-151162475	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs561417137	chr4:151162479-151162480	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs574734526	chr4:151162485-151162486	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs543808724	chr4:151162490-151162491	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs562149958	chr4:151162537-151162538	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs115843129	chr4:151162583-151162584	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs575187160	chr4:151162603-151162604	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs140108507	chr4:151162640-151162641	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs574093974	chr4:151162736-151162737	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs192691891	chr4:151162802-151162803	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs528316138	chr4:151162875-151162876	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs142146598	chr4:151162880-151162881	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs546098226	chr4:151162886-151162887	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs57789323	chr4:151162925-151162926	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs376586936	chr4:151162936-151162937	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs146378161	chr4:151162963-151162964	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs368693391	chr4:151162981-151162982	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs527907661	chr4:151162989-151162990	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs182393258	chr4:151163017-151163018	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs188282019	chr4:151163022-151163023	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs4696635	chr4:151163048-151163049	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs139752616	chr4:151163055-151163056	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs535044848	chr4:151163069-151163070	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs572675639	chr4:151163164-151163165	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs191534759	chr4:151163167-151163168	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs113845287	chr4:151163171-151163172	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs76217821	chr4:151163186-151163187	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs574879186	chr4:151163216-151163217	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs543425391	chr4:151163225-151163226	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs144545315	chr4:151163253-151163254	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs577204000	chr4:151163254-151163255	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs371289295	chr4:151163267-151163268	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs369237013	chr4:151163276-151163277	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs145449721	chr4:151163327-151163328	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs528231168	chr4:151163344-151163345	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs541627322	chr4:151163346-151163347	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs373733482	chr4:151163360-151163361	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs530644912	chr4:151163362-151163363	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	21183584	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	16272173	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Esophageal cancer	21851588	CNVD
Testicular germ cell tumor	18059402	CNVD
Ovarian cancer	22174824	CNVD
Olfactory neuroblastoma	18408657	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	21633010	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Non-small cell lung cancer	21829676	CNVD
Breast cancer	17588203	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:602 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:151138800-151169800	Weak transcription	Spleen	Spleen
2	chr4:151139600-151177400	Weak transcription	Brain Substantia Nigra	brain
3	chr4:151139600-151181000	Weak transcription	Brain Angular Gyrus	brain
4	chr4:151140000-151175000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr4:151142200-151172200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr4:151146200-151169200	Weak transcription	Brain Cingulate Gyrus	brain
7	chr4:151146400-151165600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr4:151146600-151165600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr4:151150800-151170800	Weak transcription	Pancreas	Pancrea
10	chr4:151151800-151165600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr4:151152400-151176400	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr4:151152800-151164200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr4:151153600-151164800	Weak transcription	Right Atrium	heart
14	chr4:151156200-151173000	Weak transcription	Fetal Intestine Small	intestine
15	chr4:151156400-151163600	Weak transcription	Aorta	Aorta
16	chr4:151156400-151165200	Weak transcription	Brain Hippocampus Middle	brain
17	chr4:151156400-151165600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr4:151156400-151169000	Weak transcription	Adipose Nuclei	Adipose
19	chr4:151156400-151169400	Weak transcription	Fetal Muscle Leg	muscle
20	chr4:151156400-151170600	Weak transcription	Right Ventricle	heart
21	chr4:151156400-151174200	Weak transcription	Brain Inferior Temporal Lobe	brain
22	chr4:151157000-151167800	Weak transcription	Fetal Brain Female	brain
23	chr4:151157400-151165400	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr4:151157400-151167400	Weak transcription	Fetal Brain Male	brain
25	chr4:151157600-151169400	Weak transcription	Left Ventricle	heart
26	chr4:151157600-151170800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr4:151158000-151165600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr4:151158000-151181000	Weak transcription	Fetal Heart	heart
29	chr4:151158200-151167800	Weak transcription	Ovary	ovary
30	chr4:151158200-151173000	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr4:151158800-151164600	Weak transcription	Fetal Kidney	kidney
32	chr4:151158800-151165400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
33	chr4:151158800-151165600	Weak transcription	HUES64 Cell Line	embryonic stem cell
34	chr4:151158800-151165800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
35	chr4:151158800-151170200	Weak transcription	Colon Smooth Muscle	Colon
36	chr4:151159000-151165600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
37	chr4:151159000-151173000	Weak transcription	Rectal Smooth Muscle	rectum
38	chr4:151159200-151163200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr4:151159200-151165600	Genic enhancers	A549	lung
40	chr4:151159200-151165800	Weak transcription	Fetal Lung	lung
41	chr4:151159200-151166200	Weak transcription	Pancreatic Islets	Pancreatic Islet
42	chr4:151160000-151185400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr4:151160200-151163400	Strong transcription	HSMMtube	muscle
44	chr4:151160400-151165800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr4:151160400-151169000	Weak transcription	NHLF	lung
46	chr4:151160600-151163400	Strong transcription	Brain Germinal Matrix	brain
47	chr4:151160800-151162200	Strong transcription	Stomach Smooth Muscle	stomach
48	chr4:151161000-151164200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr4:151161200-151173000	Weak transcription	Brain Anterior Caudate	brain
50	chr4:151161600-151163200	Strong transcription	HSMM	muscle

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