Variant report

Variant	rs574093974
Chromosome Location	chr4:151162736-151162737
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026797	chr4:150246932-151217137	Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv932022	chr4:150831733-151419552	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv1032689	chr4:150971003-151316856	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv537300	chr4:150971003-151316856	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv880256	chr4:151126725-151751369	Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
6	nsv1022132	chr4:151162048-151183859	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:151138800-151169800	Weak transcription	Spleen	Spleen
2	chr4:151139600-151177400	Weak transcription	Brain Substantia Nigra	brain
3	chr4:151139600-151181000	Weak transcription	Brain Angular Gyrus	brain
4	chr4:151140000-151175000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr4:151142200-151172200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr4:151146200-151169200	Weak transcription	Brain Cingulate Gyrus	brain
7	chr4:151146400-151165600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr4:151146600-151165600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr4:151150800-151170800	Weak transcription	Pancreas	Pancrea
10	chr4:151151800-151165600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr4:151152400-151176400	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr4:151152800-151164200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr4:151153600-151164800	Weak transcription	Right Atrium	heart
14	chr4:151156200-151173000	Weak transcription	Fetal Intestine Small	intestine
15	chr4:151156400-151163600	Weak transcription	Aorta	Aorta
16	chr4:151156400-151165200	Weak transcription	Brain Hippocampus Middle	brain
17	chr4:151156400-151165600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr4:151156400-151169000	Weak transcription	Adipose Nuclei	Adipose
19	chr4:151156400-151169400	Weak transcription	Fetal Muscle Leg	muscle
20	chr4:151156400-151170600	Weak transcription	Right Ventricle	heart
21	chr4:151156400-151174200	Weak transcription	Brain Inferior Temporal Lobe	brain
22	chr4:151157000-151167800	Weak transcription	Fetal Brain Female	brain
23	chr4:151157400-151165400	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr4:151157400-151167400	Weak transcription	Fetal Brain Male	brain
25	chr4:151157600-151169400	Weak transcription	Left Ventricle	heart
26	chr4:151157600-151170800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr4:151158000-151165600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr4:151158000-151181000	Weak transcription	Fetal Heart	heart
29	chr4:151158200-151167800	Weak transcription	Ovary	ovary
30	chr4:151158200-151173000	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr4:151158800-151164600	Weak transcription	Fetal Kidney	kidney
32	chr4:151158800-151165400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
33	chr4:151158800-151165600	Weak transcription	HUES64 Cell Line	embryonic stem cell
34	chr4:151158800-151165800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
35	chr4:151158800-151170200	Weak transcription	Colon Smooth Muscle	Colon
36	chr4:151159000-151165600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
37	chr4:151159000-151173000	Weak transcription	Rectal Smooth Muscle	rectum
38	chr4:151159200-151163200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr4:151159200-151165600	Genic enhancers	A549	lung
40	chr4:151159200-151165800	Weak transcription	Fetal Lung	lung
41	chr4:151159200-151166200	Weak transcription	Pancreatic Islets	Pancreatic Islet
42	chr4:151160000-151185400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr4:151160200-151163400	Strong transcription	HSMMtube	muscle
44	chr4:151160400-151165800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr4:151160400-151169000	Weak transcription	NHLF	lung
46	chr4:151160600-151163400	Strong transcription	Brain Germinal Matrix	brain
47	chr4:151161000-151164200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr4:151161200-151173000	Weak transcription	Brain Anterior Caudate	brain
49	chr4:151161600-151163200	Strong transcription	HSMM	muscle
50	chr4:151161600-151163200	Strong transcription	Osteobl	bone

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