Variant report

Variant	nsv1022457
Chromosome Location	chr8:113071774-113811177
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1808)
CpG islands
(count:550)
Chromatin interactive
region (count:59)
LncRNA
region (count:1)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:1808 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:113350397-113350810	HepG2	liver:	n/a	chr8:113350726-113350742
2	ARID3A	chr8:113477312-113477622	HepG2	liver:	n/a	n/a
3	ATF1	chr8:113500282-113500373	K562	blood:	n/a	n/a
4	ATF1	chr8:113711892-113712099	K562	blood:	n/a	n/a
5	ATF2	chr8:113407709-113408069	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr8:113114422-113114764	H1-hESC	embryonic stem cell:	n/a	n/a
7	BCL11A	chr8:113407778-113408009	H1-hESC	embryonic stem cell:	n/a	n/a
8	BCL11A	chr8:113407703-113408043	H1-hESC	embryonic stem cell:	n/a	n/a
9	BCL3	chr8:113472001-113472616	A549	lung:	n/a	n/a
10	BCL3	chr8:113623801-113624046	GM12878	blood:	n/a	n/a
11	BCL3	chr8:113472029-113472628	A549	lung:	n/a	n/a
12	CEBPB	chr8:113274911-113275140	A549	lung:	n/a	chr8:113275014-113275025
13	CEBPB	chr8:113584175-113584533	IMR90	lung:	n/a	chr8:113584378-113584389 chr8:113584378-113584391 chr8:113584325-113584336 chr8:113584380-113584391
14	CEBPB	chr8:113584242-113584491	K562	blood:	n/a	chr8:113584378-113584389 chr8:113584378-113584391 chr8:113584325-113584336 chr8:113584380-113584391
15	CEBPB	chr8:113163673-113163818	H1-hESC	embryonic stem cell:	n/a	n/a
16	CEBPB	chr8:113482783-113483181	HepG2	liver:	n/a	chr8:113483052-113483065
17	CEBPB	chr8:113206482-113206726	A549	lung:	n/a	chr8:113206547-113206558
18	CEBPB	chr8:113242212-113242350	A549	lung:	n/a	n/a
19	CEBPB	chr8:113311107-113311386	HepG2	liver:	n/a	chr8:113311249-113311260
20	CEBPB	chr8:113347479-113347753	HepG2	liver:	n/a	chr8:113347586-113347597
21	CEBPB	chr8:113358923-113359044	A549	lung:	n/a	n/a
22	CEBPB	chr8:113280087-113280707	MCF-7	breast:	n/a	chr8:113280278-113280289 chr8:113280276-113280289 chr8:113280276-113280289
23	CEBPB	chr8:113584173-113584544	HepG2	liver:	n/a	chr8:113584378-113584389 chr8:113584378-113584391 chr8:113584325-113584336 chr8:113584380-113584391
24	CEBPB	chr8:113574808-113574989	A549	lung:	n/a	chr8:113574860-113574871 chr8:113574860-113574873 chr8:113574860-113574873
25	CEBPB	chr8:113280050-113280396	MCF-7	breast:	n/a	chr8:113280278-113280289 chr8:113280276-113280289 chr8:113280276-113280289
26	CEBPB	chr8:113200327-113200529	K562	blood:	n/a	chr8:113200412-113200423 chr8:113200411-113200424
27	CEBPB	chr8:113574810-113574943	H1-hESC	embryonic stem cell:	n/a	chr8:113574860-113574871 chr8:113574860-113574873 chr8:113574860-113574873
28	CEBPB	chr8:113162870-113163178	Hela-S3	cervix:	n/a	n/a
29	CEBPB	chr8:113695353-113695608	HepG2	liver:	n/a	n/a
30	CEBPB	chr8:113304728-113304928	HepG2	liver:	n/a	n/a
31	CEBPB	chr8:113124344-113124674	K562	blood:	n/a	n/a
32	CEBPB	chr8:113122867-113123167	HepG2	liver:	n/a	chr8:113123001-113123012
33	CEBPB	chr8:113584277-113584402	H1-hESC	embryonic stem cell:	n/a	chr8:113584378-113584389 chr8:113584378-113584391 chr8:113584325-113584336 chr8:113584380-113584391
34	CEBPB	chr8:113162974-113163124	H1-hESC	embryonic stem cell:	n/a	n/a
35	CEBPB	chr8:113392132-113392452	HepG2	liver:	n/a	chr8:113392419-113392430 chr8:113392276-113392287 chr8:113392419-113392432 chr8:113392419-113392430
36	CEBPB	chr8:113249290-113249512	A549	lung:	n/a	chr8:113249323-113249336
37	CEBPB	chr8:113447661-113448018	IMR90	lung:	n/a	chr8:113447842-113447853
38	CEBPB	chr8:113584252-113584508	A549	lung:	n/a	chr8:113584378-113584389 chr8:113584378-113584391 chr8:113584325-113584336 chr8:113584380-113584391
39	CEBPB	chr8:113130499-113130817	IMR90	lung:	n/a	n/a
40	CEBPB	chr8:113675839-113676178	MCF-7	breast:	n/a	chr8:113675994-113676003 chr8:113675994-113676003 chr8:113675993-113676004 chr8:113675994-113676003 chr8:113675992-113676003 chr8:113675992-113676005 chr8:113675992-113676005 chr8:113675994-113676003
41	CEBPB	chr8:113447678-113447992	H1-hESC	embryonic stem cell:	n/a	chr8:113447842-113447853
42	CEBPB	chr8:113273878-113274126	K562	blood:	n/a	chr8:113274050-113274061
43	CEBPB	chr8:113482832-113483200	IMR90	lung:	n/a	chr8:113483052-113483065
44	CEBPB	chr8:113447657-113448038	Hela-S3	cervix:	n/a	chr8:113447842-113447853
45	CEBPB	chr8:113162863-113163191	HepG2	liver:	n/a	n/a
46	CEBPB	chr8:113162912-113163153	A549	lung:	n/a	n/a
47	CEBPB	chr8:113458738-113458836	H1-hESC	embryonic stem cell:	n/a	n/a
48	CEBPB	chr8:113447659-113448026	HepG2	liver:	n/a	chr8:113447842-113447853
49	CEBPB	chr8:113705928-113706157	HepG2	liver:	n/a	n/a
50	CEBPB	chr8:113682533-113683041	Hela-S3	cervix:	n/a	n/a

(count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:113655561-113655611	HIPEpiC	eye:	n/a
2	chr8:113655561-113655611	HIPEpiC	eye:	n/a
3	chr8:113145005-113145055	HPAEpiC	pulmonary alveolar:	n/a
4	chr8:113351420-113351470	BJ	skin:	n/a
5	chr8:113655436-113655486	Caco-2	colon:	n/a
6	chr8:113281175-113281225	HEK293	kidney:	embryo
7	chr8:113145005-113145055	SK-N-MC	brain:	n/a
8	chr8:113702707-113702757	PANC-1	pancreas:	n/a
9	chr8:113656015-113656065	AG10803	skin:	n/a
10	chr8:113655436-113655486	RPTEC	kidney:	n/a
11	chr8:113145005-113145055	U87	brain:	n/a
12	chr8:113703176-113703226	HL-60	blood:	n/a
13	chr8:113655436-113655486	IMR90	lung:	fetal
14	chr8:113702707-113702757	HEEpiC	esophagus:	n/a
15	chr8:113703176-113703226	H1-hESC	embryonic stem cell:	embryo
16	chr8:113656015-113656065	A549	lung:	n/a
17	chr8:113145005-113145055	AG10803	skin:	n/a
18	chr8:113703176-113703226	T-47D	breast:	n/a
19	chr8:113351420-113351470	SAEC	small airway:	n/a
20	chr8:113655561-113655611	NHDF-neo	bronchial:	n/a
21	chr8:113145005-113145055	SK-N-SH_RA	brain:	n/a
22	chr8:113655436-113655486	HCPEpiC	choroid plexus:	n/a
23	chr8:113656015-113656065	LNCaP	prostate:	n/a
24	chr8:113656015-113656065	GM06990	blood:	n/a
25	chr8:113655561-113655611	PFSK-1	brain:	n/a
26	chr8:113702707-113702757	NT2-D1	testis:	n/a
27	chr8:113703176-113703226	NHDF-neo	bronchial:	n/a
28	chr8:113655561-113655611	GM06990	blood:	n/a
29	chr8:113656015-113656065	HAEpiC	amniotic membrane:	n/a
30	chr8:113655436-113655486	GM06990	blood:	n/a
31	chr8:113703176-113703226	A549	lung:	n/a
32	chr8:113656015-113656065	SKMC	muscle:	n/a
33	chr8:113703176-113703226	AG09319	gingival:	n/a
34	chr8:113656015-113656065	NB4	blood:	n/a
35	chr8:113145005-113145055	NHBE	bronchial:	n/a
36	chr8:113656015-113656065	T-47D	breast:	n/a
37	chr8:113656015-113656065	HUVEC	blood vessel:	n/a
38	chr8:113655436-113655486	U87	brain:	n/a
39	chr8:113702707-113702757	CMK	blood:	n/a
40	chr8:113113972-113114022	IMR90	lung:	fetal
41	chr8:113113972-113114022	HL-60	blood:	n/a
42	chr8:113145005-113145055	GM12892	blood:	n/a
43	chr8:113656015-113656065	PFSK-1	brain:	n/a
44	chr8:113655436-113655486	AG04449	skin:	fetal
45	chr8:113703176-113703226	HUVEC	blood vessel:	n/a
46	chr8:113655436-113655486	SK-N-MC	brain:	n/a
47	chr8:113145005-113145055	HRPEpiC	eye:	n/a
48	chr8:113113972-113114022	AG09309	skin:	n/a
49	chr8:113702707-113702757	HMEC	breast:	n/a
50	chr8:113145005-113145055	PrEC	prostate:	n/a

(count:59 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:85195583..85198227-chr8:113682885..113684772,2	MCF-7	breast:
2	chr8:113334749..113337746-chr8:113352582..113354421,2	MCF-7	breast:
3	chr8:113121132..113122642-chr8:113123330..113125697,2	MCF-7	breast:
4	chr8:113334749..113337746-chr8:113352582..113354421,2	MCF-7	breast:
5	chr8:112976314..112977253-chr8:113408305..113409151,3	MCF-7	breast:
6	chr8:113719443..113721302-chr8:113723054..113725365,2	K562	blood:
7	chr20:18661388..18664062-chr8:113586254..113588798,2	MCF-7	breast:
8	chr8:112976579..112977386-chr8:113471922..113472710,2	MCF-7	breast:
9	chr8:113773909..113774597-chr8:114183855..114184506,4	MCF-7	breast:
10	chr8:113773910..113774788-chr8:114210759..114211408,2	MCF-7	breast:
11	chr8:113659187..113660730-chr8:113666931..113668583,2	MCF-7	breast:
12	chr8:113495952..113497684-chr8:113532113..113534940,2	MCF-7	breast:
13	chr6:30778063..30780102-chr8:113652986..113654698,2	MCF-7	breast:
14	chr8:113408283..113409229-chr8:113477372..113477931,2	MCF-7	breast:
15	chr8:113411416..113413911-chr8:113414434..113416216,2	MCF-7	breast:
16	chr8:112976187..112977006-chr8:113476921..113477813,7	MCF-7	breast:
17	chr8:113282212..113283944-chr8:113285167..113287640,2	MCF-7	breast:
18	chr8:113774024..113774627-chr8:114390471..114391174,2	MCF-7	breast:
19	chr8:113411416..113413911-chr8:113414434..113416216,2	MCF-7	breast:
20	chr8:112946373..112947269-chr8:113476964..113477520,2	MCF-7	breast:
21	chr8:112878252..112879995-chr8:113601916..113604196,2	MCF-7	breast:
22	chr8:112947101..112947938-chr8:113477362..113477935,2	MCF-7	breast:
23	chr8:102371552..102373757-chr8:113387253..113389057,2	MCF-7	breast:
24	chr8:113536029..113539003-chr8:113540588..113542968,2	MCF-7	breast:
25	chr8:113282212..113283944-chr8:113285167..113287640,2	MCF-7	breast:
26	chr8:113536029..113539003-chr8:113540588..113542968,2	MCF-7	breast:
27	chr8:113730328..113732083-chr8:113748434..113750301,2	K562	blood:
28	chr8:113623376..113625406-chr8:113626015..113627569,2	MCF-7	breast:
29	chr8:112946347..112947268-chr8:113386770..113387527,2	MCF-7	breast:
30	chr8:113774045..113774707-chr8:114449888..114450422,3	MCF-7	breast:
31	chr8:113461648..113464072-chr8:113471155..113472872,2	MCF-7	breast:
32	chr8:113408283..113409229-chr8:113477372..113477931,2	MCF-7	breast:
33	chr8:113648317..113650428-chr8:113651221..113653011,2	MCF-7	breast:
34	chr8:113121132..113122642-chr8:113123330..113125697,2	MCF-7	breast:
35	chr8:113648317..113650428-chr8:113651221..113653011,2	MCF-7	breast:
36	chr8:113352984..113355457-chr8:113360171..113363116,2	MCF-7	breast:
37	chr8:113476778..113477604-chr8:114449777..114450474,2	MCF-7	breast:
38	chr8:113123396..113125846-chr8:113130246..113132854,2	MCF-7	breast:
39	chr8:113495952..113497684-chr8:113532113..113534940,2	MCF-7	breast:
40	chr8:113719443..113721302-chr8:113723054..113725365,2	K562	blood:
41	chr8:113036903..113039112-chr8:113145309..113148146,2	K562	blood:
42	chr8:113623376..113625406-chr8:113626015..113627569,2	MCF-7	breast:
43	chr8:113753759..113755315-chr8:113758540..113760790,2	MCF-7	breast:
44	chr8:113656932..113658484-chr8:113659367..113661819,2	K562	blood:
45	chr8:112976151..112977081-chr8:113386595..113387462,4	MCF-7	breast:
46	chr8:113123396..113125846-chr8:113130246..113132854,2	MCF-7	breast:
47	chr8:113753759..113755315-chr8:113758540..113760790,2	MCF-7	breast:
48	chr8:112946524..112947507-chr8:113386902..113387446,2	MCF-7	breast:
49	chr8:113461648..113464072-chr8:113471155..113472872,2	MCF-7	breast:
50	chr8:113659187..113660730-chr8:113666931..113668583,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP11-67H2.1.1-6	chr8:113551118-113551546	NONHSAT128340

miRNA name	Chromosome Location	mirBase accession
hsa-miR-2053	chr8:113655782-113655804	MIMAT0009978

No data

Variant related genes	Relation type
RPL30P16	TF binding region
RNU4-37P	TF binding region
ENSG00000264794	TF binding region
CSMD3	TF binding region
ENSG00000238656	TF binding region
MIR2053	TF binding region
RPL30P16	CpG island
RNU4-37P	CpG island
ENSG00000264794	CpG island
CSMD3	CpG island
ENSG00000238656	CpG island
MIR2053	CpG island

Extended variants
information (count: 19095 )
Associated
traits (count: 104 )

Variant overlapped rSNPs/rCNVs (count:19095 , 50 per page) page: 1 2 3 4 5 6 7 ... 382

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs557161685	chr8:113074226-113074227	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs552575299	chr8:113074243-113074244	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs574009069	chr8:113074270-113074271	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs536225551	chr8:113074303-113074304	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs565919557	chr8:113074365-113074366	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs542684430	chr8:113074410-113074411	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs536485026	chr8:113074418-113074419	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs553645365	chr8:113074421-113074422	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs573161377	chr8:113074535-113074536	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs545199692	chr8:113074545-113074546	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs4876276	chr8:113074557-113074558	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs34755550	chr8:113074558-113074559	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs192225992	chr8:113074619-113074620	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs10098184	chr8:113074667-113074668	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs184251429	chr8:113074685-113074686	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs548837956	chr8:113074721-113074722	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs529712765	chr8:113074765-113074766	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs546241940	chr8:113074773-113074774	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs560467314	chr8:113074779-113074780	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs7813171	chr8:113074791-113074792	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs141859764	chr8:113075942-113075943	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs530180521	chr8:113075956-113075957	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs532421197	chr8:113077615-113077616	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs375960549	chr8:113077640-113077641	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs115478268	chr8:113077642-113077643	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs187255264	chr8:113077699-113077700	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs375207726	chr8:113077717-113077718	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs146936932	chr8:113077819-113077820	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs369336999	chr8:113077820-113077821	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs371681991	chr8:113077881-113077882	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs550848972	chr8:113077891-113077892	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs548626738	chr8:113077965-113077966	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs190095482	chr8:113084411-113084412	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs79375567	chr8:113084518-113084519	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs28441203	chr8:113084558-113084559	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs35667073	chr8:113084561-113084562	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs183605279	chr8:113084650-113084651	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs375789955	chr8:113084654-113084655	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs541716217	chr8:113084699-113084700	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs187002623	chr8:113084708-113084709	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs571892014	chr8:113084743-113084744	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs540355818	chr8:113084778-113084779	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs540793172	chr8:113086005-113086006	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs567011869	chr8:113086042-113086043	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs187751179	chr8:113086068-113086069	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs13260037	chr8:113086092-113086093	Enhancers Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs142217044	chr8:113086095-113086096	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs145810630	chr8:113086145-113086146	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs34773793	chr8:113086259-113086260	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs562789674	chr8:113086269-113086270	Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:104)

Disease	PMID	Source
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Gastric cancer	17908304	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Colorectal cancer	16774939	CNVD
Autosomal-dominant progressive external ophthalmoplegia	19664747	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Sezary syndrome	18413736	CNVD
Breast cancer	21611746	CNVD
Developmental delay	21147756	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Non-small cell lung cancer	19010865	CNVD
small cell lung cancer	20016488	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21364760	CNVD
Neuroticism	17667963	CNVD
Papillary thyroid cancer	17515504	CNVD
Basal cell lymphoma	17053054	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Prostate cancer	22341455	CNVD
Colorectal cancer	21645411	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:757 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:113074200-113074800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:113075800-113076000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr8:113077600-113078000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr8:113077600-113078000	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr8:113084400-113084800	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr8:113086000-113086200	Enhancers	Gastric	stomach
7	chr8:113086000-113086400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr8:113086000-113086400	Active TSS	Skeletal Muscle Male	skeletal muscle
9	chr8:113086400-113095200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr8:113086600-113087400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr8:113087400-113087600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr8:113087600-113087800	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr8:113087800-113088000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr8:113088000-113089600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr8:113089600-113090600	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr8:113091000-113091600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr8:113091400-113094000	Enhancers	HMEC	breast
18	chr8:113091600-113092400	Enhancers	NHEK	skin
19	chr8:113091600-113092600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr8:113092600-113093000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr8:113093000-113093400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr8:113094400-113094800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr8:113094400-113094800	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr8:113095200-113095400	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr8:113095400-113104200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr8:113102600-113104000	Enhancers	iPS-18 Cell Line	embryonic stem cell
27	chr8:113102800-113104200	Enhancers	HUES48 Cell Line	embryonic stem cell
28	chr8:113103200-113103600	Enhancers	iPS-20b Cell Line	embryonic stem cell
29	chr8:113103800-113104200	Active TSS	Gastric	stomach
30	chr8:113103800-113104600	Enhancers	HUES6 Cell Line	embryonic stem cell
31	chr8:113103800-113104800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
32	chr8:113103800-113105000	Enhancers	H1 Cell Line	embryonic stem cell
33	chr8:113104200-113104400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr8:113104200-113104600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr8:113104200-113104800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr8:113104600-113105000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr8:113105000-113105200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr8:113110000-113110800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr8:113110000-113111200	Enhancers	HMEC	breast
40	chr8:113110400-113111200	Enhancers	A549	lung
41	chr8:113111200-113113200	Weak transcription	A549	lung
42	chr8:113113200-113114800	Enhancers	A549	lung
43	chr8:113113400-113114800	Enhancers	HUES48 Cell Line	embryonic stem cell
44	chr8:113113600-113113800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
45	chr8:113113800-113114800	Enhancers	iPS-20b Cell Line	embryonic stem cell
46	chr8:113114400-113114800	Enhancers	iPS-18 Cell Line	embryonic stem cell
47	chr8:113114800-113118400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
48	chr8:113118400-113119400	Enhancers	iPS-18 Cell Line	embryonic stem cell
49	chr8:113127200-113127800	Enhancers	HMEC	breast
50	chr8:113127400-113127800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links