Variant report

Variant nsv1024028
Chromosome Location chr6:5057399-5081990
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5054800-5058600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr6:5054800-5059800 Weak transcription Fetal Kidney kidney
3 chr6:5055200-5061400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr6:5057200-5057800 Enhancers HUES48 Cell Line embryonic stem cell
5 chr6:5057400-5057600 Enhancers Fetal Intestine Small intestine
6 chr6:5057400-5057600 Enhancers GM12878-XiMat blood
7 chr6:5057400-5058000 Enhancers Fetal Muscle Trunk muscle
8 chr6:5057600-5058200 Weak transcription Fetal Intestine Small intestine
9 chr6:5057600-5058200 Enhancers Placenta Placenta
10 chr6:5057600-5058600 Weak transcription GM12878-XiMat blood
11 chr6:5057600-5059200 Enhancers HepG2 liver
12 chr6:5058200-5062000 Enhancers Fetal Intestine Small intestine
13 chr6:5058400-5058600 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr6:5058400-5058600 Bivalent Enhancer K562 blood
15 chr6:5058400-5058800 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr6:5058600-5058800 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr6:5058600-5058800 Enhancers GM12878-XiMat blood
18 chr6:5058600-5059000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr6:5058600-5060400 Enhancers Rectal Mucosa Donor 31 rectum
20 chr6:5058600-5060600 Enhancers Fetal Intestine Large intestine
21 chr6:5058600-5063000 Enhancers Liver Liver
22 chr6:5058800-5064000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr6:5059200-5059400 Enhancers Rectal Mucosa Donor 29 rectum
24 chr6:5059200-5059800 Flanking Active TSS HepG2 liver
25 chr6:5059800-5060000 Enhancers Fetal Kidney kidney
26 chr6:5059800-5064400 Enhancers HepG2 liver
27 chr6:5060000-5060200 Enhancers Rectal Mucosa Donor 29 rectum
28 chr6:5060600-5061200 Weak transcription Fetal Intestine Large intestine
29 chr6:5061200-5061400 Enhancers Fetal Intestine Large intestine
30 chr6:5061400-5062000 Enhancers Adipose Nuclei Adipose
31 chr6:5061400-5062200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr6:5062000-5067000 Weak transcription Fetal Intestine Small intestine
33 chr6:5063000-5067600 Weak transcription Liver Liver
34 chr6:5063400-5063800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
35 chr6:5063800-5064200 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
36 chr6:5064000-5064200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr6:5064200-5067000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr6:5064400-5067400 Weak transcription HepG2 liver
39 chr6:5065400-5067000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr6:5067000-5067200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr6:5067000-5067400 ZNF genes & repeats Fetal Intestine Small intestine
42 chr6:5067200-5067800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr6:5067200-5068600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr6:5067400-5067800 ZNF genes & repeats Brain Hippocampus Middle brain
45 chr6:5067400-5068200 Enhancers HepG2 liver
46 chr6:5067400-5074000 Weak transcription Ovary ovary
47 chr6:5067600-5068800 Enhancers Liver Liver
48 chr6:5067800-5071200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr6:5068000-5068600 Weak transcription Fetal Intestine Small intestine
50 chr6:5068200-5068800 Enhancers Fetal Intestine Large intestine

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