Variant report

Variant nsv1026081
Chromosome Location chr7:50525900-50538184
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:229 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:50518800-50535400 Weak transcription Pancreas Pancrea
2 chr7:50518800-50535600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr7:50518800-50535600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr7:50518800-50535600 Weak transcription HepG2 liver
5 chr7:50519000-50529400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr7:50524800-50530000 Weak transcription Liver Liver
7 chr7:50525000-50526400 Strong transcription Duodenum Mucosa Duodenum
8 chr7:50525000-50526400 Strong transcription Fetal Intestine Large intestine
9 chr7:50525000-50527200 Strong transcription Fetal Intestine Small intestine
10 chr7:50526400-50526600 Weak transcription Fetal Intestine Large intestine
11 chr7:50526400-50528800 Weak transcription Duodenum Mucosa Duodenum
12 chr7:50526600-50526800 ZNF genes & repeats Fetal Intestine Large intestine
13 chr7:50527200-50529200 Weak transcription Fetal Intestine Small intestine
14 chr7:50528400-50529200 Weak transcription Fetal Intestine Large intestine
15 chr7:50528800-50533800 Strong transcription Duodenum Mucosa Duodenum
16 chr7:50528800-50535400 Weak transcription Colonic Mucosa Colon
17 chr7:50529200-50529600 ZNF genes & repeats Fetal Intestine Small intestine
18 chr7:50529200-50535600 Strong transcription Fetal Intestine Large intestine
19 chr7:50529400-50529800 Strong transcription Rectal Mucosa Donor 29 rectum
20 chr7:50529600-50535400 Strong transcription Fetal Intestine Small intestine
21 chr7:50529800-50530600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr7:50530000-50530400 Enhancers HUVEC blood vessel
23 chr7:50530000-50531000 Enhancers Hela-S3 cervix
24 chr7:50530000-50533200 Strong transcription Liver Liver
25 chr7:50530400-50533600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr7:50530400-50535400 Weak transcription HUVEC blood vessel
27 chr7:50530600-50531800 Strong transcription Rectal Mucosa Donor 29 rectum
28 chr7:50531000-50535400 Weak transcription Hela-S3 cervix
29 chr7:50531800-50532200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr7:50532200-50532800 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr7:50532200-50535400 Weak transcription Brain Hippocampus Middle brain
32 chr7:50532400-50535400 Weak transcription Gastric stomach
33 chr7:50532800-50535600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr7:50533200-50535400 Weak transcription Liver Liver
35 chr7:50533600-50533800 Flanking Bivalent TSS/Enh H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr7:50533600-50533800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
37 chr7:50533800-50534400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr7:50533800-50535600 Weak transcription Duodenum Mucosa Duodenum
39 chr7:50534400-50534600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
40 chr7:50534400-50534600 Bivalent Enhancer Fetal Muscle Leg muscle
41 chr7:50534400-50535600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
42 chr7:50534600-50535400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr7:50534600-50535600 Enhancers Brain Germinal Matrix brain
44 chr7:50534800-50535600 Enhancers Cortex derived primary cultured neurospheres brain
45 chr7:50535000-50535600 Weak transcription Right Atrium heart
46 chr7:50535200-50535400 Enhancers Primary T helper naive cells fromperipheralblood blood
47 chr7:50535200-50535400 Enhancers Dnd41 blood
48 chr7:50535200-50535600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr7:50535200-50536200 Enhancers Fetal Brain Male brain
50 chr7:50535200-50536400 Enhancers Fetal Thymus thymus

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