Variant report

Variant	nsv1031039
Chromosome Location	chr6:167324021-167741439
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:8943)
CpG islands
(count:9661)
Chromatin interactive
region (count:205)
LncRNA
region (count:42)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:8943 , 50 per page) page: 1 2 3 4 5 6 7 ... 179

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:167702230-167702578	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:167364761-167365174	K562	blood:	n/a	n/a
3	ARID3A	chr6:167624462-167624811	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:167536241-167537214	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:167652605-167653007	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:167554236-167555094	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:167629887-167630151	HepG2	liver:	n/a	n/a
8	ARID3A	chr6:167722138-167722657	HepG2	liver:	n/a	n/a
9	ARID3A	chr6:167409914-167410241	HepG2	liver:	n/a	n/a
10	ARID3A	chr6:167633428-167633974	HepG2	liver:	n/a	n/a
11	ARID3A	chr6:167704338-167705733	HepG2	liver:	n/a	n/a
12	ARID3A	chr6:167682223-167682912	HepG2	liver:	n/a	n/a
13	ARID3A	chr6:167372891-167373023	K562	blood:	n/a	n/a
14	ARID3A	chr6:167400997-167401197	HepG2	liver:	n/a	n/a
15	ARID3A	chr6:167699867-167700232	HepG2	liver:	n/a	n/a
16	ARID3A	chr6:167353960-167354308	K562	blood:	n/a	n/a
17	ARID3A	chr6:167324658-167325218	K562	blood:	n/a	n/a
18	ARID3A	chr6:167372448-167372816	HepG2	liver:	n/a	n/a
19	ARID3A	chr6:167628930-167629130	HepG2	liver:	n/a	n/a
20	ARID3A	chr6:167629415-167629646	HepG2	liver:	n/a	n/a
21	ARID3A	chr6:167637599-167638030	HepG2	liver:	n/a	n/a
22	ARID3A	chr6:167412733-167413004	K562	blood:	n/a	n/a
23	ARID3A	chr6:167370020-167370428	HepG2	liver:	n/a	n/a
24	ARID3A	chr6:167356202-167356749	K562	blood:	n/a	n/a
25	ARID3A	chr6:167371261-167371329	HepG2	liver:	n/a	n/a
26	ARID3A	chr6:167723215-167724601	HepG2	liver:	n/a	n/a
27	ARID3A	chr6:167651727-167651738	HepG2	liver:	n/a	n/a
28	ARID3A	chr6:167655013-167655211	HepG2	liver:	n/a	n/a
29	ARID3A	chr6:167544586-167544925	HepG2	liver:	n/a	n/a
30	ARID3A	chr6:167400842-167401030	K562	blood:	n/a	n/a
31	ARID3A	chr6:167645950-167646149	HepG2	liver:	n/a	n/a
32	ARID3A	chr6:167371809-167372105	HepG2	liver:	n/a	n/a
33	ARID3A	chr6:167412830-167413052	HepG2	liver:	n/a	n/a
34	ARID3A	chr6:167632046-167632420	HepG2	liver:	n/a	n/a
35	ATF1	chr6:167324192-167325358	K562	blood:	n/a	n/a
36	ATF1	chr6:167538302-167538600	K562	blood:	n/a	n/a
37	ATF1	chr6:167328715-167329352	K562	blood:	n/a	n/a
38	ATF1	chr6:167727339-167727444	K562	blood:	n/a	n/a
39	ATF1	chr6:167364441-167365172	K562	blood:	n/a	n/a
40	ATF1	chr6:167412491-167413014	K562	blood:	n/a	n/a
41	ATF1	chr6:167513659-167514463	K562	blood:	n/a	n/a
42	ATF1	chr6:167356210-167356679	K562	blood:	n/a	n/a
43	ATF1	chr6:167702337-167702425	K562	blood:	n/a	n/a
44	ATF1	chr6:167345566-167345627	K562	blood:	n/a	n/a
45	ATF1	chr6:167372668-167373071	K562	blood:	n/a	n/a
46	ATF2	chr6:167516544-167517232	GM12878	blood:	n/a	n/a
47	ATF2	chr6:167493214-167493693	GM12878	blood:	n/a	n/a
48	ATF2	chr6:167543402-167543914	GM12878	blood:	n/a	n/a
49	ATF2	chr6:167507302-167509165	GM12878	blood:	n/a	n/a
50	ATF2	chr6:167526348-167528528	GM12878	blood:	n/a	chr6:167528159-167528170

(count:9661 , 50 per page) page: 1 2 3 4 5 6 7 ... 194

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:167590911-167590961	NHDF-neo	bronchial:	n/a
2	chr6:167554790-167554840	Caco-2	colon:	n/a
3	chr6:167680447-167680497	HEK293	kidney:	embryo
4	chr6:167536069-167536119	GM06990	blood:	n/a
5	chr6:167370587-167370637	HCPEpiC	choroid plexus:	n/a
6	chr6:167554790-167554840	ECC-1	luminal epithelium:	n/a
7	chr6:167709237-167709287	MCF10A-Er-Src	breast:	n/a
8	chr6:167591040-167591090	GM12878	blood:	n/a
9	chr6:167704673-167704723	PFSK-1	brain:	n/a
10	chr6:167571630-167571680	NB4	blood:	n/a
11	chr6:167368657-167368707	HEK293	kidney:	embryo
12	chr6:167590911-167590961	NB4	blood:	n/a
13	chr6:167705253-167705303	HepG2	liver:	n/a
14	chr6:167490870-167490920	MCF-7	breast:	n/a
15	chr6:167705253-167705303	NH-A	brain:	n/a
16	chr6:167700000-167700050	NT2-D1	testis:	n/a
17	chr6:167536063-167536113	GM12891	blood:	n/a
18	chr6:167508041-167508091	PFSK-1	brain:	n/a
19	chr6:167709237-167709287	AG04450	lung:	fetal
20	chr6:167415325-167415375	Hepatocyte	liver:	n/a
21	chr6:167718461-167718511	BJ	skin:	n/a
22	chr6:167661905-167661955	AG04449	skin:	fetal
23	chr6:167525398-167525448	ECC-1	luminal epithelium:	n/a
24	chr6:167590911-167590961	NHDF-neo	bronchial:	n/a
25	chr6:167554790-167554840	Caco-2	colon:	n/a
26	chr6:167680447-167680497	HEK293	kidney:	embryo
27	chr6:167536069-167536119	GM06990	blood:	n/a
28	chr6:167370587-167370637	HCPEpiC	choroid plexus:	n/a
29	chr6:167554790-167554840	ECC-1	luminal epithelium:	n/a
30	chr6:167709237-167709287	MCF10A-Er-Src	breast:	n/a
31	chr6:167591040-167591090	GM12878	blood:	n/a
32	chr6:167704673-167704723	PFSK-1	brain:	n/a
33	chr6:167571630-167571680	NB4	blood:	n/a
34	chr6:167368657-167368707	HEK293	kidney:	embryo
35	chr6:167590911-167590961	NB4	blood:	n/a
36	chr6:167705253-167705303	HepG2	liver:	n/a
37	chr6:167490870-167490920	MCF-7	breast:	n/a
38	chr6:167705253-167705303	NH-A	brain:	n/a
39	chr6:167700000-167700050	NT2-D1	testis:	n/a
40	chr6:167536063-167536113	GM12891	blood:	n/a
41	chr6:167508041-167508091	PFSK-1	brain:	n/a
42	chr6:167709237-167709287	AG04450	lung:	fetal
43	chr6:167415325-167415375	Hepatocyte	liver:	n/a
44	chr6:167718461-167718511	BJ	skin:	n/a
45	chr6:167661905-167661955	AG04449	skin:	fetal
46	chr6:167525398-167525448	ECC-1	luminal epithelium:	n/a
47	chr6:167703894-167703944	BJ	skin:	n/a
48	chr6:167703894-167703944	BE2_C	brain:	n/a
49	chr6:167408664-167408714	HAEpiC	amniotic membrane:	n/a
50	chr6:167369491-167369541	CMK	blood:	n/a

(count:205 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr6:167631565..167632072-chr6:167702069..167702692,3	K562	blood:
2	chr6:167362668..167365438-chr6:167411450..167414365,2	MCF-7	breast:
3	chr6:167420630..167423584-chr6:167426285..167427998,2	MCF-7	breast:
4	chr6:167459004..167459905-chr6:167555024..167555917,3	MCF-7	breast:
5	chr6:167410797..167412644-chr6:167437633..167439150,2	MCF-7	breast:
6	chr6:167547071..167549495-chr6:167560421..167562886,2	K562	blood:
7	chr6:167409616..167411218-chr6:167423790..167425616,2	K562	blood:
8	chr6:167515250..167516810-chr6:167519372..167521331,2	K562	blood:
9	chr6:167410903..167412089-chr6:167555232..167556268,5	MCF-7	breast:
10	chr6:167380676..167382734-chr6:167385661..167387748,2	K562	blood:
11	chr6:167368947..167371010-chr6:167382080..167384318,2	K562	blood:
12	chr6:167199892..167200482-chr6:167403182..167403715,3	MCF-7	breast:
13	chr6:167514455..167516810-chr6:167518589..167520872,3	K562	blood:
14	chr6:167353995..167356024-chr6:167413983..167416895,2	K562	blood:
15	chr6:167369776..167371784-chr6:167403677..167406103,3	K562	blood:
16	chr6:167623779..167626117-chr6:167629928..167632260,2	MCF-7	breast:
17	chr6:167508063..167510526-chr6:167511244..167513696,2	K562	blood:
18	chr11:206936..207454-chr6:167411617..167412576,2	HCT-116	colon:
19	chr6:167438895..167441335-chr6:167445093..167449039,4	K562	blood:
20	chr6:167433967..167438012-chr6:167438507..167442863,4	K562	blood:
21	chr6:167442856..167445565-chr6:167449588..167451484,2	K562	blood:
22	chr6:167516694..167518621-chr6:167521648..167524357,2	K562	blood:
23	chr6:167369560..167371875-chr6:167398344..167400077,2	K562	blood:
24	chr1:28836187..28837925-chr6:167694572..167696254,2	K562	blood:
25	chr6:167368335..167372073-chr6:167409735..167414257,6	K562	blood:
26	chr6:167188018..167188945-chr6:167458801..167459761,3	MCF-7	breast:
27	chr6:167188403..167189352-chr6:167555280..167555897,4	K562	blood:
28	chr6:167411662..167413392-chr6:167420876..167423491,2	MCF-7	breast:
29	chr6:167200031..167200812-chr6:167555407..167555996,2	K562	blood:
30	chr6:167433967..167440072-chr6:167441363..167445632,6	K562	blood:
31	chr6:167533318..167534107-chr6:167555281..167555885,2	MCF-7	breast:
32	chr6:167369091..167370610-chr6:167386274..167387917,2	MCF-7	breast:
33	chr6:167533925..167534442-chr6:167554372..167555227,2	MCF-7	breast:
34	chr6:167573482..167576354-chr6:167702662..167705429,2	K562	blood:
35	chr6:167368539..167373039-chr6:167409933..167412837,4	MCF-7	breast:
36	chr6:167533573..167534443-chr6:167549334..167550301,3	MCF-7	breast:
37	chr6:167372682..167375031-chr6:167410586..167412884,3	K562	blood:
38	chr6:167376063..167378279-chr6:167383576..167385467,2	K562	blood:
39	chr6:167382648..167385296-chr6:167441304..167444220,2	K562	blood:
40	chr6:167397805..167399426-chr6:167403364..167405935,2	MCF-7	breast:
41	chr6:167453011..167457183-chr6:167458189..167461851,4	K562	blood:
42	chr6:167428569..167431228-chr6:167442588..167444802,2	K562	blood:
43	chr6:167369620..167371640-chr6:167412068..167415220,3	K562	blood:
44	chr6:167383885..167385840-chr6:167392702..167394703,2	K562	blood:
45	chr6:167404788..167406294-chr6:167419141..167421789,2	K562	blood:
46	chr6:167423442..167425516-chr6:167426454..167430057,4	K562	blood:
47	chr6:167324476..167326634-chr6:167338829..167341348,2	K562	blood:
48	chr6:167702039..167702568-chr6:167764606..167765474,2	MCF-7	breast:
49	chr6:167514455..167516810-chr6:167518589..167520872,3	K562	blood:
50	chr6:167383062..167385710-chr6:167390180..167391984,2	MCF-7	breast:

(count:42 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CCR6-1	chr6:167575369-167575443	NONHSAT116084
2	lnc-GPR31-3	chr6:167582786-167583034	FPKM1_group_28907_transcript_1
3	lnc-CCR6-1	chr6:167579265-167579394	NONHSAT116084
4	lnc-RNASET2-5	chr6:167399645-167400870	NONHSAT116067
5	lnc-RNASET2-5	chr6:167404676-167405315	NONHSAT116067
6	lnc-RNASET2-5	chr6:167405780-167406155	NONHSAT116067
7	lnc-GPR31-3	chr6:167583147-167583385	FPKM1_group_28907_transcript_1
8	lnc-CCR6-2	chr6:167590485-167590622	NONHSAT116087
9	lnc-UNC93A-1	chr6:167659275-167659404	XLOC_005540
10	lnc-RNASET2-5	chr6:167395715-167396324	NONHSAT116067
11	lnc-UNC93A-1	chr6:167655379-167655453	XLOC_005540
12	lnc-TCP10L2-1	chr6:167562878-167562972	NONHSAT116082
13	lnc-RNASET2-5	chr6:167401169-167402445	NONHSAT116067
14	lnc-CCR6-2	chr6:167591872-167592248	NONHSAT116087
15	lnc-TCP10L2-1	chr6:167578697-167578796	NONHSAT116082
16	lnc-RNASET2-2	chr6:167370437-167370679	NONHSAT116063
17	lnc-TCP10L2-1	chr6:167559902-167560143	NONHSAT116082
18	lnc-TCP10L2-1	chr6:167577889-167578048	NONHSAT116082
19	lnc-GPR31-1	chr6:167651156-167651293	XLOC_005921
20	lnc-RNASET2-2	chr6:167346863-167347624	NONHSAT116063
21	lnc-RNASET2-5	chr6:167403134-167403854	NONHSAT116067
22	lnc-GPR31-2	chr6:167571213-167571283	l_3324_chr6:167571212-167573961_ovary
23	lnc-GPR31-1	chr6:167653636-167653833	XLOC_005921
24	lnc-GPR31-3	chr6:167583039-167583124	FPKM1_group_28907_transcript_1
25	lnc-RPS6KA2-2	chr6:167357853-167360151	NONHSAT116065
26	lnc-GPR31-1	chr6:167650996-167651293	XLOC_005921
27	lnc-RNASET2-5	chr6:167410591-167411574	NONHSAT116067
28	lnc-GPR31-2	chr6:167573626-167573961	l_3324_chr6:167571212-167573961_ovary
29	lnc-FGFR1OP-9	chr6:167374299-167374866	expReg_chr6_12870_+
30	lnc-FGFR1OP-8	chr6:167465448-167466347	NONHSAT116076
31	lnc-CCR6-2	chr6:167584146-167584210	NONHSAT116086
32	lnc-CCR6-2	chr6:167584159-167584210	NONHSAT116087
33	lnc-RNASET2-5	chr6:167391323-167392276	NONHSAT116067
34	lnc-GPR31-3	chr6:167583147-167583385	NONHSAT116085
35	lnc-CCR6-2	chr6:167585632-167586297	NONHSAT116086
36	lnc-RNASET2-2	chr6:167369585-167369679	NONHSAT116063
37	lnc-RNASET2-5	chr6:167407011-167407405	NONHSAT116067
38	lnc-RNASET2-5	chr6:167395651-167395682	NONHSAT116067
39	lnc-GPR31-1	chr6:167653688-167653968	XLOC_005921
40	lnc-RNASET2-5	chr6:167394844-167395320	NONHSAT116067
41	lnc-GPR31-3	chr6:167582786-167583124	NONHSAT116085
42	lnc-GPR31-5	chr6:167509671-167510205	NONHSAT116081

miRNA name	Chromosome Location	mirBase accession
hsa-miR-3939	chr6:167411318-167411339	MIMAT0018355

No data

Variant related genes	Relation type
UNC93A	TF binding region
ENSG00000249141	TF binding region
TTLL2	TF binding region
ENSG00000231720	TF binding region
ENSG00000272980	TF binding region
GPR31	TF binding region
TCP10L2	TF binding region
RNASET2	TF binding region
ENSG00000227598	TF binding region
ENSG00000228648	TF binding region
CCR6	TF binding region
ENSG00000216966	TF binding region
RPS6KA2	TF binding region
ENSG00000197146	TF binding region
FGFR1OP	TF binding region
MIR3939	TF binding region
UNC93A	CpG island
ENSG00000249141	CpG island
TTLL2	CpG island
ENSG00000231720	CpG island
ENSG00000272980	CpG island
GPR31	CpG island
TCP10L2	CpG island
RNASET2	CpG island
ENSG00000227598	CpG island
ENSG00000228648	CpG island
CCR6	CpG island
ENSG00000216966	CpG island
RPS6KA2	CpG island
ENSG00000197146	CpG island
FGFR1OP	CpG island
MIR3939	CpG island
ENSG00000105325	chromatin interactions
ENSG00000166984	chromatin interactions
ENSG00000112486	chromatin interactions
ENSG00000272980	chromatin interactions
ENSG00000227598	chromatin interactions
ENSG00000197146	chromatin interactions
ENSG00000112494	chromatin interactions
ENSG00000177951	chromatin interactions
ENSG00000216966	chromatin interactions
ENSG00000265828	chromatin interactions
ENSG00000213066	chromatin interactions
ENSG00000026297	chromatin interactions
ENSG00000071242	chromatin interactions
ENSG00000120436	chromatin interactions
ENSG00000249141	chromatin interactions
ENSG00000180198	chromatin interactions
CYBASC3	miRNA target sites
CYB5R4	miRNA target sites

Extended variants
information (count: 17678 )
Associated
traits (count: 96 )

Variant overlapped rSNPs/rCNVs (count:17678 , 50 per page) page: 1 2 3 4 5 6 7 ... 354

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs182493553	chr6:167324034-167324035	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs545855927	chr6:167324070-167324071	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs564477841	chr6:167324074-167324075	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs539381576	chr6:167324136-167324137	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs186612977	chr6:167324150-167324151	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs7753939	chr6:167324156-167324157	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs80122654	chr6:167324170-167324171	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs79348477	chr6:167324180-167324181	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs74633961	chr6:167324184-167324185	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs569947756	chr6:167324218-167324219	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs530552933	chr6:167324252-167324253	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs376084049	chr6:167324253-167324254	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs551903604	chr6:167324259-167324260	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs370624996	chr6:167324260-167324261	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs373151731	chr6:167324267-167324268	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs534424250	chr6:167324310-167324311	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs34159386	chr6:167324339-167324340	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs11970316	chr6:167324353-167324354	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs535638463	chr6:167324373-167324374	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs192552027	chr6:167324425-167324426	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs531188502	chr6:167324450-167324451	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs74650833	chr6:167324485-167324486	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs34431091	chr6:167324501-167324502	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs140675080	chr6:167324553-167324554	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs557876864	chr6:167324596-167324597	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs142980557	chr6:167324602-167324603	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs36032379	chr6:167324612-167324613	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs371348296	chr6:167324624-167324625	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs61602553	chr6:167324659-167324660	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs577225699	chr6:167324691-167324692	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs77443079	chr6:167324745-167324746	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs563458383	chr6:167324761-167324762	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs80097458	chr6:167324837-167324838	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs563467753	chr6:167324914-167324915	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs34850479	chr6:167325035-167325036	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs566135542	chr6:167325103-167325104	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs75572172	chr6:167325107-167325108	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs569881930	chr6:167325126-167325127	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs144169334	chr6:167325149-167325150	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs112983630	chr6:167325183-167325184	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs546324814	chr6:167325185-167325186	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs561115257	chr6:167325193-167325194	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs73256740	chr6:167325218-167325219	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs375249816	chr6:167325228-167325229	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs535150737	chr6:167325241-167325242	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs183924478	chr6:167325258-167325259	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs569392051	chr6:167325411-167325412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs539747725	chr6:167325434-167325435	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs112128214	chr6:167325459-167325460	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs573196704	chr6:167325564-167325565	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:96)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Chordoma	18071362	CNVD
Glioblastoma multiforme	19435819	CNVD
Developmental delay	21147756	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Epilepsy	22083797	CNVD
Myelofibrosis	22110671	CNVD
chordoma	19801981	CNVD
Myxofibrosarcoma	16751306	CNVD
Autism	17483303	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute myeloid leukemia	19651601	CNVD
Sudden cardiac death	19188705	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	17440070	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Ependymoma	20639864	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Cancer	20164919	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:7632 , 50 per page) page: 1 2 3 4 5 6 7 ... 153

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:167315800-167341600	Weak transcription	Pancreas	Pancrea
2	chr6:167318400-167343800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr6:167318600-167342400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:167318800-167324400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr6:167318800-167326800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr6:167319200-167327600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr6:167320400-167326000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr6:167320400-167327400	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr6:167321200-167326000	Weak transcription	Primary neutrophils fromperipheralblood	blood
10	chr6:167321200-167327800	Weak transcription	Brain Substantia Nigra	brain
11	chr6:167321200-167340000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr6:167321400-167326000	Weak transcription	Duodenum Mucosa	Duodenum
13	chr6:167321600-167331000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
14	chr6:167321600-167340600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr6:167321800-167324400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr6:167321800-167342200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
17	chr6:167322000-167324400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
18	chr6:167322000-167340200	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr6:167322000-167340600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
20	chr6:167322000-167341600	Weak transcription	Gastric	stomach
21	chr6:167322200-167326000	Weak transcription	Brain Germinal Matrix	brain
22	chr6:167322200-167326200	Weak transcription	Primary T helper cells fromperipheralblood	blood
23	chr6:167322200-167330400	Weak transcription	HepG2	liver
24	chr6:167322400-167340000	Weak transcription	Primary hematopoietic stem cells	blood
25	chr6:167322600-167324400	Weak transcription	GM12878-XiMat	blood
26	chr6:167322600-167330200	Weak transcription	Primary T cells from cord blood	blood
27	chr6:167322600-167340000	Weak transcription	Primary monocytes fromperipheralblood	blood
28	chr6:167322800-167326200	Weak transcription	Primary B cells from cord blood	blood
29	chr6:167323000-167324400	Weak transcription	Primary B cells from peripheral blood	blood
30	chr6:167323000-167326200	Weak transcription	Ovary	ovary
31	chr6:167323000-167332200	Weak transcription	Monocytes-CD14+_RO01746	blood
32	chr6:167323400-167339200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
33	chr6:167323800-167325200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr6:167324000-167324200	Enhancers	Brain Inferior Temporal Lobe	brain
35	chr6:167324000-167325400	Enhancers	K562	blood
36	chr6:167324200-167324600	Enhancers	HMEC	breast
37	chr6:167324400-167324600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
38	chr6:167324400-167324600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
39	chr6:167324400-167324800	Enhancers	Primary B cells from peripheral blood	blood
40	chr6:167324400-167325000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr6:167324400-167325200	Enhancers	NH-A	brain
42	chr6:167324400-167325400	Enhancers	GM12878-XiMat	blood
43	chr6:167324600-167324800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
44	chr6:167324800-167325600	Weak transcription	Primary B cells from peripheral blood	blood
45	chr6:167325400-167329200	Weak transcription	K562	blood
46	chr6:167325600-167326200	Enhancers	Primary B cells from peripheral blood	blood
47	chr6:167326000-167326600	Strong transcription	Duodenum Mucosa	Duodenum
48	chr6:167326000-167327000	Strong transcription	Primary neutrophils fromperipheralblood	blood
49	chr6:167326000-167328200	Enhancers	Brain Germinal Matrix	brain
50	chr6:167326000-167328400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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