Variant report

Variant	nsv1040483
Chromosome Location	chr9:100835325-100868437
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1180)
CpG islands
(count:427)
Chromatin interactive
region (count:73)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1180 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:100844031-100844061	HepG2	liver:	n/a	n/a
2	ATF2	chr9:100866643-100867021	GM12878	blood:	n/a	n/a
3	ATF2	chr9:100863896-100864660	GM12878	blood:	n/a	n/a
4	ATF2	chr9:100866562-100867062	GM12878	blood:	n/a	n/a
5	ATF2	chr9:100864106-100864659	GM12878	blood:	n/a	n/a
6	ATF2	chr9:100859837-100860518	GM12878	blood:	n/a	n/a
7	BACH1	chr9:100850011-100850437	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr9:100864563-100864616	H1-hESC	embryonic stem cell:	n/a	n/a
9	BATF	chr9:100860154-100860524	GM12878	blood:	n/a	n/a
10	BATF	chr9:100864253-100864600	GM12878	blood:	n/a	n/a
11	BATF	chr9:100860097-100860478	GM12878	blood:	n/a	n/a
12	BCL11A	chr9:100864175-100864643	GM12878	blood:	n/a	n/a
13	BCL11A	chr9:100864284-100864550	GM12878	blood:	n/a	n/a
14	BCL11A	chr9:100860091-100860436	GM12878	blood:	n/a	n/a
15	BCL3	chr9:100861179-100861451	GM12878	blood:	n/a	n/a
16	BCL3	chr9:100855495-100855829	GM12878	blood:	n/a	n/a
17	BCLAF1	chr9:100864005-100864715	GM12878	blood:	n/a	n/a
18	BCLAF1	chr9:100866460-100867104	GM12878	blood:	n/a	chr9:100867008-100867017
19	BCLAF1	chr9:100861004-100861545	GM12878	blood:	n/a	n/a
20	BCLAF1	chr9:100864118-100864689	GM12878	blood:	n/a	n/a
21	BCLAF1	chr9:100860032-100860554	GM12878	blood:	n/a	n/a
22	BCLAF1	chr9:100836696-100836982	GM12878	blood:	n/a	n/a
23	BCLAF1	chr9:100866601-100867061	GM12878	blood:	n/a	chr9:100867008-100867017
24	BHLHE40	chr9:100848420-100848564	GM12878	blood:	n/a	n/a
25	BHLHE40	chr9:100861194-100861326	GM12878	blood:	n/a	n/a
26	BHLHE40	chr9:100866070-100866426	GM12878	blood:	n/a	n/a
27	BHLHE40	chr9:100843728-100844123	HepG2	liver:	n/a	n/a
28	BHLHE40	chr9:100866682-100866944	GM12878	blood:	n/a	n/a
29	BHLHE40	chr9:100836681-100836885	K562	blood:	n/a	n/a
30	BHLHE40	chr9:100864119-100864668	GM12878	blood:	n/a	n/a
31	BHLHE40	chr9:100846151-100846244	K562	blood:	n/a	n/a
32	BHLHE40	chr9:100850303-100850475	GM12878	blood:	n/a	n/a
33	BHLHE40	chr9:100836684-100837036	GM12878	blood:	n/a	n/a
34	CCNT2	chr9:100849898-100850349	K562	blood:	n/a	n/a
35	CCNT2	chr9:100846174-100846417	K562	blood:	n/a	n/a
36	CEBPB	chr9:100845360-100845695	HepG2	liver:	n/a	chr9:100845523-100845534 chr9:100845522-100845535
37	CEBPB	chr9:100845387-100845682	Hela-S3	cervix:	n/a	chr9:100845523-100845534 chr9:100845522-100845535
38	CEBPB	chr9:100864297-100864572	GM12878	blood:	n/a	n/a
39	CEBPB	chr9:100845368-100845708	K562	blood:	n/a	chr9:100845523-100845534 chr9:100845522-100845535
40	CEBPB	chr9:100866653-100866891	K562	blood:	n/a	chr9:100866778-100866791 chr9:100866779-100866790 chr9:100866778-100866791 chr9:100866778-100866789 chr9:100866778-100866791
41	CEBPB	chr9:100866619-100866942	HepG2	liver:	n/a	chr9:100866778-100866791 chr9:100866779-100866790 chr9:100866778-100866791 chr9:100866778-100866789 chr9:100866778-100866791
42	CEBPB	chr9:100843694-100844050	HepG2	liver:	n/a	n/a
43	CEBPB	chr9:100864056-100864776	GM12878	blood:	n/a	n/a
44	CEBPB	chr9:100848293-100848587	H1-hESC	embryonic stem cell:	n/a	n/a
45	CEBPB	chr9:100866671-100866898	Hela-S3	cervix:	n/a	chr9:100866778-100866791 chr9:100866779-100866790 chr9:100866778-100866791 chr9:100866778-100866789 chr9:100866778-100866791
46	CEBPB	chr9:100866644-100866889	GM12878	blood:	n/a	chr9:100866778-100866791 chr9:100866779-100866790 chr9:100866778-100866791 chr9:100866778-100866789 chr9:100866778-100866791
47	CEBPB	chr9:100843739-100843951	HepG2	liver:	n/a	n/a
48	CEBPB	chr9:100866628-100866951	IMR90	lung:	n/a	chr9:100866778-100866791 chr9:100866779-100866790 chr9:100866778-100866791 chr9:100866778-100866789 chr9:100866778-100866791
49	CEBPB	chr9:100848432-100848457	K562	blood:	n/a	n/a
50	CEBPB	chr9:100866614-100866899	K562	blood:	n/a	chr9:100866778-100866791 chr9:100866779-100866790 chr9:100866778-100866791 chr9:100866778-100866789 chr9:100866778-100866791

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:100837807-100837857	Hepatocyte	liver:	n/a
2	chr9:100849274-100849324	LNCaP	prostate:	n/a
3	chr9:100864335-100864385	HEEpiC	esophagus:	n/a
4	chr9:100850391-100850441	HRE	kidney:	n/a
5	chr9:100837807-100837857	K562	blood:	n/a
6	chr9:100864335-100864385	HL-60	blood:	n/a
7	chr9:100849274-100849324	NB4	blood:	n/a
8	chr9:100855205-100855255	PFSK-1	brain:	n/a
9	chr9:100850391-100850441	ProgFib	skin:	n/a
10	chr9:100849700-100849750	AG09309	skin:	n/a
11	chr9:100864335-100864385	K562	blood:	n/a
12	chr9:100855205-100855255	IMR90	lung:	fetal
13	chr9:100849700-100849750	GM12891	blood:	n/a
14	chr9:100837807-100837857	Caco-2	colon:	n/a
15	chr9:100864335-100864385	SK-N-SH_RA	brain:	n/a
16	chr9:100850391-100850441	Hela-S3	cervix:	n/a
17	chr9:100849274-100849324	GM12892	blood:	n/a
18	chr9:100837807-100837857	LNCaP	prostate:	n/a
19	chr9:100855205-100855255	A549	lung:	n/a
20	chr9:100846886-100846936	GM19239	blood:	n/a
21	chr9:100850391-100850441	HepG2	liver:	n/a
22	chr9:100849700-100849750	SAEC	small airway:	n/a
23	chr9:100846886-100846936	HL-60	blood:	n/a
24	chr9:100846886-100846936	NB4	blood:	n/a
25	chr9:100864335-100864385	ovcar-3	ovarian:	n/a
26	chr9:100864335-100864385	RPTEC	kidney:	n/a
27	chr9:100846886-100846936	LNCaP	prostate:	n/a
28	chr9:100850391-100850441	NH-A	brain:	n/a
29	chr9:100837807-100837857	NH-A	brain:	n/a
30	chr9:100864335-100864385	HEK293	kidney:	embryo
31	chr9:100864335-100864385	HPAEpiC	pulmonary alveolar:	n/a
32	chr9:100837807-100837857	NT2-D1	testis:	n/a
33	chr9:100855205-100855255	AG04450	lung:	fetal
34	chr9:100850391-100850441	GM06990	blood:	n/a
35	chr9:100849274-100849324	AG04450	lung:	fetal
36	chr9:100849274-100849324	A549	lung:	n/a
37	chr9:100837807-100837857	HMEC	breast:	n/a
38	chr9:100849700-100849750	HCPEpiC	choroid plexus:	n/a
39	chr9:100846886-100846936	SK-N-SH_RA	brain:	n/a
40	chr9:100846886-100846936	HRPEpiC	eye:	n/a
41	chr9:100850391-100850441	HCF	heart:	n/a
42	chr9:100846886-100846936	Jurkat	blood:	n/a
43	chr9:100846886-100846936	Hela-S3	cervix:	n/a
44	chr9:100855205-100855255	SAEC	small airway:	n/a
45	chr9:100846886-100846936	K562	blood:	n/a
46	chr9:100849274-100849324	AoSMC	blood vessel:	n/a
47	chr9:100864335-100864385	Jurkat	blood:	n/a
48	chr9:100846886-100846936	HEEpiC	esophagus:	n/a
49	chr9:100850391-100850441	PFSK-1	brain:	n/a
50	chr9:100849700-100849750	HIPEpiC	eye:	n/a

(count:73 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr9:100818415..100820201-chr9:100844089..100845708,2	MCF-7	breast:
2	chr9:100860467..100862654-chr9:100943409..100946106,2	K562	blood:
3	chr9:100866980..100869660-chr9:100895040..100897583,2	MCF-7	breast:
4	chr9:100849256..100851636-chr9:100854662..100858526,4	MCF-7	breast:
5	chr9:100848562..100851460-chr9:100859656..100862171,2	MCF-7	breast:
6	chr9:100843269..100846185-chr9:100848032..100850204,2	K562	blood:
7	chr9:100850324..100853210-chr9:100878642..100880962,2	K562	blood:
8	chr9:100836599..100837275-chr9:100996445..100997215,2	MCF-7	breast:
9	chr9:100744956..100747210-chr9:100835059..100837055,2	K562	blood:
10	chr9:100842880..100846056-chr9:100849764..100852020,3	MCF-7	breast:
11	chr9:100744716..100748585-chr9:100832900..100838437,10	MCF-7	breast:
12	chr9:100858708..100861627-chr9:100861648..100863594,2	MCF-7	breast:
13	chr9:100833852..100836754-chr9:100837101..100838637,2	MCF-7	breast:
14	chr9:100817966..100819958-chr9:100840027..100843917,3	K562	blood:
15	chr9:100832336..100835863-chr9:100838081..100840239,3	K562	blood:
16	chr9:100855541..100857442-chr9:101017373..101019341,2	MCF-7	breast:
17	chr9:100845870..100848174-chr9:100911791..100914448,2	K562	blood:
18	chr9:100841190..100843013-chr9:100847159..100849959,2	K562	blood:
19	chr17:59915399..59917132-chr9:100865983..100868318,2	MCF-7	breast:
20	chr9:100842650..100845592-chr9:100845952..100848847,2	MCF-7	breast:
21	chr9:100842838..100844707-chr9:100881208..100883358,2	MCF-7	breast:
22	chr9:100861454..100863501-chr9:100865367..100867490,2	MCF-7	breast:
23	chr9:100836616..100838130-chr9:100853751..100855728,2	K562	blood:
24	chr9:100854857..100858216-chr9:100859815..100862385,4	K562	blood:
25	chr9:100833054..100835913-chr9:100950027..100952929,2	MCF-7	breast:
26	chr9:100845133..100849564-chr9:100852067..100857931,7	K562	blood:
27	chr9:100857836..100860169-chr9:101016082..101018377,3	K562	blood:
28	chr9:100858584..100860538-chr9:100935257..100937803,2	MCF-7	breast:
29	chr9:100849256..100851636-chr9:100854662..100858526,4	MCF-7	breast:
30	chr9:100862346..100865171-chr9:100880500..100883017,2	K562	blood:
31	chr9:100838071..100839825-chr9:100848704..100850871,2	K562	blood:
32	chr9:100836770..100838393-chr9:100846222..100848303,2	K562	blood:
33	chr9:100864402..100866260-chr9:100880228..100882375,2	K562	blood:
34	chr9:100849838..100852817-chr9:100854861..100857855,4	MCF-7	breast:
35	chr9:100836616..100838130-chr9:100853751..100855728,2	K562	blood:
36	chr9:100822595..100824589-chr9:100834188..100836915,2	MCF-7	breast:
37	chr9:100842983..100846250-chr9:100851999..100855804,4	MCF-7	breast:
38	chr9:100744956..100747904-chr9:100835369..100837055,2	K562	blood:
39	chr9:100817590..100820574-chr9:100860322..100862706,3	K562	blood:
40	chr9:100745732..100748566-chr9:100835046..100837989,2	MCF-7	breast:
41	chr9:100841190..100843013-chr9:100847159..100849959,2	K562	blood:
42	chr19:55917273..55919241-chr9:100834526..100836640,2	MCF-7	breast:
43	chr9:100838525..100840109-chr9:100844644..100847387,2	MCF-7	breast:
44	chr9:100817775..100822653-chr9:100832609..100840095,16	MCF-7	breast:
45	chr9:100842559..100845315-chr9:101012488..101014157,2	MCF-7	breast:
46	chr9:100842280..100844769-chr9:100879230..100881771,2	K562	blood:
47	chr9:100860198..100865318-chr9:100878989..100883996,6	MCF-7	breast:
48	chr9:100837647..100840134-chr9:101017650..101020011,2	MCF-7	breast:
49	chr9:100828471..100830288-chr9:100834435..100836026,2	MCF-7	breast:
50	chr9:100843832..100846656-chr9:100852067..100855805,4	K562	blood:

No data

Variant related genes	Relation type
TRIM14	TF binding region
NANS	TF binding region
TRIM14	CpG island
NANS	CpG island
ENSG00000095383	chromatin interactions
ENSG00000095380	chromatin interactions
ENSG00000108106	chromatin interactions
ENSG00000136932	chromatin interactions
ENSG00000224001	chromatin interactions
ENSG00000136938	chromatin interactions
ENSG00000106785	chromatin interactions
ENSG00000106789	chromatin interactions
ENSG00000165119	chromatin interactions

Extended variants
information (count: 1267 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:1267 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs565214661	chr9:100835332-100835333	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
2	rs114744251	chr9:100835354-100835355	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
3	rs113952184	chr9:100835362-100835363	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
4	rs114281824	chr9:100835386-100835387	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
5	rs550356498	chr9:100835411-100835412	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
6	rs570252189	chr9:100835418-100835419	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs114682114	chr9:100835486-100835487	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
8	rs558965260	chr9:100835490-100835491	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs566379458	chr9:100835499-100835500	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
10	rs533527346	chr9:100835506-100835507	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
11	rs553733386	chr9:100835515-100835516	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
12	rs541344986	chr9:100835518-100835519	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
13	rs369879698	chr9:100835542-100835543	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
14	rs10606237	chr9:100835554-100835555	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
15	rs552899635	chr9:100835581-100835582	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
16	rs113149883	chr9:100835582-100835583	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
17	rs142106033	chr9:100835631-100835632	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
18	rs151149926	chr9:100835690-100835691	Weak transcription Strong transcription Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs555889378	chr9:100835702-100835703	Weak transcription Strong transcription Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs374998611	chr9:100835718-100835719	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs575813260	chr9:100835723-100835724	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs545225771	chr9:100835756-100835757	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
23	rs140062462	chr9:100835787-100835788	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
24	rs369767931	chr9:100835801-100835802	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
25	rs541017766	chr9:100835864-100835865	Weak transcription Strong transcription Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs561342546	chr9:100835868-100835869	Weak transcription Strong transcription Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs34969073	chr9:100835873-100835874	Weak transcription Strong transcription Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs398011593	chr9:100835885-100835886	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
29	rs41340647	chr9:100835907-100835908	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs7029176	chr9:100835932-100835933	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
31	rs190008924	chr9:100835956-100835957	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
32	rs7029193	chr9:100835976-100835977	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
33	rs7029278	chr9:100835991-100835992	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs570190658	chr9:100835999-100836000	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
35	rs532737280	chr9:100836008-100836009	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
36	rs7029283	chr9:100836015-100836016	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
37	rs552759485	chr9:100836047-100836048	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
38	rs566196524	chr9:100836061-100836062	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
39	rs7029299	chr9:100836068-100836069	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
40	rs560187290	chr9:100836092-100836093	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
41	rs10538675	chr9:100836094-100836095	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
42	rs199910478	chr9:100836095-100836096	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
43	rs201033943	chr9:100836098-100836099	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
44	rs115595452	chr9:100836118-100836119	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
45	rs138455926	chr9:100836131-100836132	Weak transcription Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs566921348	chr9:100836206-100836207	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs371283969	chr9:100836239-100836240	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
48	rs374970014	chr9:100836240-100836241	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
49	rs369426232	chr9:100836273-100836274	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
50	rs555827785	chr9:100836321-100836322	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Biliary cancer	19435499	CNVD
small cell lung cancer	20016488	CNVD
Intracranial aneurysm	16715129	CNVD
Cardiac fibroma	18329553	CNVD
Breast cancer	17133270	CNVD
Basal cell nevus syndrome	21572526	CNVD
Mental retardation	19951919	CNVD
Retinoblastoma	22278416	CNVD
9q22.3 microdeletion syndrome	22283845	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
overgrowth syndrome	16570072	CNVD
Neurodevelopmental disorder	22521361	CNVD
Nicotine dependence	17160897	CNVD
Mantle cell lymphoma	19029149	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1684 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100819600-100848400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr9:100820000-100836400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr9:100820000-100836600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr9:100820000-100836600	Weak transcription	Brain Angular Gyrus	brain
5	chr9:100820000-100843000	Weak transcription	Brain Substantia Nigra	brain
6	chr9:100820000-100843200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr9:100820000-100843200	Weak transcription	Brain Germinal Matrix	brain
8	chr9:100820000-100843200	Weak transcription	Fetal Brain Female	brain
9	chr9:100820000-100847200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr9:100820000-100849600	Weak transcription	Fetal Brain Male	brain
11	chr9:100820000-100850000	Weak transcription	Fetal Kidney	kidney
12	chr9:100820200-100843000	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr9:100821000-100836400	Weak transcription	Colon Smooth Muscle	Colon
14	chr9:100821200-100836400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
15	chr9:100821200-100836600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
16	chr9:100821200-100849600	Weak transcription	Right Atrium	heart
17	chr9:100822400-100836400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
18	chr9:100822400-100836400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
19	chr9:100823600-100836400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
20	chr9:100823800-100842000	Weak transcription	Brain Cingulate Gyrus	brain
21	chr9:100824600-100836600	Weak transcription	Psoas Muscle	Psoas
22	chr9:100824600-100840000	Weak transcription	Ovary	ovary
23	chr9:100824800-100836400	Weak transcription	Skeletal Muscle Male	skeletal muscle
24	chr9:100824800-100840000	Weak transcription	Right Ventricle	heart
25	chr9:100824800-100843200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr9:100825000-100836400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
27	chr9:100827200-100841200	Weak transcription	Cortex derived primary cultured neurospheres	brain
28	chr9:100827400-100835400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr9:100827400-100835400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr9:100827400-100836400	Weak transcription	Primary B cells from cord blood	blood
31	chr9:100827400-100836400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr9:100827400-100836600	Weak transcription	HUES48 Cell Line	embryonic stem cell
33	chr9:100827400-100836600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
34	chr9:100827400-100836600	Weak transcription	Aorta	Aorta
35	chr9:100827400-100836600	Weak transcription	NHLF	lung
36	chr9:100827400-100838400	Weak transcription	H1 Cell Line	embryonic stem cell
37	chr9:100827600-100836400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
38	chr9:100827600-100836400	Weak transcription	Dnd41	blood
39	chr9:100827600-100836600	Weak transcription	H9 Cell Line	embryonic stem cell
40	chr9:100827600-100838200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
41	chr9:100828400-100836600	Weak transcription	Brain Anterior Caudate	brain
42	chr9:100828600-100836400	Weak transcription	Primary B cells from peripheral blood	blood
43	chr9:100828600-100836400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
44	chr9:100828600-100836400	Weak transcription	Fetal Thymus	thymus
45	chr9:100828600-100836400	Weak transcription	Left Ventricle	heart
46	chr9:100828600-100836600	Weak transcription	Brain Hippocampus Middle	brain
47	chr9:100828600-100836600	Weak transcription	Duodenum Smooth Muscle	Duodenum
48	chr9:100828600-100843200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
49	chr9:100828800-100836200	Weak transcription	Primary T cells fromperipheralblood	blood
50	chr9:100828800-100836400	Weak transcription	Primary T helper cells PMA-I stimulated	--

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