Variant report

Variant	nsv1043703
Chromosome Location	chr9:86545917-86603545
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3021)
CpG islands
(count:1464)
Chromatin interactive
region (count:104)
LncRNA
region (count:2)
Mature miRNA
region (count: 2)
miRNA target
sites (count:2)

(count:3021 , 50 per page) page: 1 2 3 4 5 6 7 ... 61

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:86594976-86595467	K562	blood:	n/a	n/a
2	ARID3A	chr9:86597040-86597385	K562	blood:	n/a	n/a
3	ARID3A	chr9:86601207-86602382	K562	blood:	n/a	n/a
4	ARID3A	chr9:86596449-86596840	K562	blood:	n/a	n/a
5	ARID3A	chr9:86594551-86595923	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:86578453-86578585	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:86601213-86602730	HepG2	liver:	n/a	n/a
8	ARID3A	chr9:86579582-86579944	K562	blood:	n/a	n/a
9	ARID3A	chr9:86571380-86571827	HepG2	liver:	n/a	n/a
10	ARID3A	chr9:86581470-86581472	HepG2	liver:	n/a	n/a
11	ARID3A	chr9:86574100-86574109	HepG2	liver:	n/a	n/a
12	ARID3A	chr9:86597156-86597200	HepG2	liver:	n/a	n/a
13	ATF1	chr9:86579533-86579865	K562	blood:	n/a	n/a
14	ATF1	chr9:86594482-86595795	K562	blood:	n/a	n/a
15	ATF1	chr9:86597081-86597370	K562	blood:	n/a	n/a
16	ATF2	chr9:86595246-86595897	GM12878	blood:	n/a	n/a
17	ATF2	chr9:86580202-86581672	GM12878	blood:	n/a	n/a
18	ATF2	chr9:86579548-86580083	GM12878	blood:	n/a	n/a
19	ATF2	chr9:86579550-86580178	GM12878	blood:	n/a	n/a
20	ATF2	chr9:86581755-86582464	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF2	chr9:86594042-86596447	GM12878	blood:	n/a	n/a
22	ATF2	chr9:86594569-86595833	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF2	chr9:86594320-86594737	GM12878	blood:	n/a	n/a
24	ATF2	chr9:86580506-86581613	H1-hESC	embryonic stem cell:	n/a	n/a
25	ATF2	chr9:86594095-86595833	H1-hESC	embryonic stem cell:	n/a	n/a
26	ATF2	chr9:86580548-86581216	GM12878	blood:	n/a	n/a
27	ATF3	chr9:86594732-86595905	A549	lung:	n/a	chr9:86595872-86595881 chr9:86595620-86595629
28	ATF3	chr9:86595014-86595833	A549	lung:	n/a	chr9:86595620-86595629
29	ATF3	chr9:86577106-86577655	HCT-116	colon:	n/a	n/a
30	BACH1	chr9:86596642-86596737	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr9:86596582-86597119	K562	blood:	n/a	n/a
32	BACH1	chr9:86595351-86595999	H1-hESC	embryonic stem cell:	n/a	n/a
33	BATF	chr9:86595412-86595753	GM12878	blood:	n/a	n/a
34	BATF	chr9:86547907-86548108	GM12878	blood:	n/a	n/a
35	BATF	chr9:86547853-86548109	GM12878	blood:	n/a	n/a
36	BCL3	chr9:86580474-86581386	GM12878	blood:	n/a	n/a
37	BCL3	chr9:86580385-86581050	A549	lung:	n/a	n/a
38	BCL3	chr9:86579562-86580425	K562	blood:	n/a	n/a
39	BCL3	chr9:86594199-86595879	A549	lung:	n/a	chr9:86595732-86595741 chr9:86595085-86595094 chr9:86594760-86594769 chr9:86595086-86595099
40	BCL3	chr9:86579835-86580381	A549	lung:	n/a	n/a
41	BCL3	chr9:86580482-86581059	GM12878	blood:	n/a	n/a
42	BCL3	chr9:86579408-86581369	A549	lung:	n/a	n/a
43	BCL3	chr9:86579986-86580447	GM12878	blood:	n/a	n/a
44	BCL3	chr9:86580322-86582517	K562	blood:	n/a	n/a
45	BCL3	chr9:86579349-86579667	GM12878	blood:	n/a	n/a
46	BCL3	chr9:86580540-86581367	K562	blood:	n/a	n/a
47	BCL3	chr9:86594134-86596012	A549	lung:	n/a	chr9:86595732-86595741 chr9:86595085-86595094 chr9:86594760-86594769 chr9:86595086-86595099
48	BCL3	chr9:86579866-86580224	GM12878	blood:	n/a	n/a
49	BCLAF1	chr9:86579327-86581454	GM12878	blood:	n/a	n/a
50	BCLAF1	chr9:86570923-86571407	GM12878	blood:	n/a	n/a

(count:1464 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:86594889-86594939	GM06990	blood:	n/a
2	chr9:86594803-86594853	SKMC	muscle:	n/a
3	chr9:86594803-86594853	AoSMC	blood vessel:	n/a
4	chr9:86594889-86594939	SK-N-SH_RA	brain:	n/a
5	chr9:86572014-86572064	A549	lung:	n/a
6	chr9:86594416-86594466	NT2-D1	testis:	n/a
7	chr9:86596281-86596331	PrEC	prostate:	n/a
8	chr9:86596124-86596174	HEEpiC	esophagus:	n/a
9	chr9:86596124-86596174	U87	brain:	n/a
10	chr9:86594416-86594466	A549	lung:	n/a
11	chr9:86596124-86596174	NT2-D1	testis:	n/a
12	chr9:86594416-86594466	HUVEC	blood vessel:	n/a
13	chr9:86596124-86596174	MCF-7	breast:	n/a
14	chr9:86594803-86594853	BE2_C	brain:	n/a
15	chr9:86596124-86596174	ECC-1	luminal epithelium:	n/a
16	chr9:86590550-86590600	AG04449	skin:	fetal
17	chr9:86594226-86594276	NHBE	bronchial:	n/a
18	chr9:86595264-86595314	HCF	heart:	n/a
19	chr9:86594803-86594853	NH-A	brain:	n/a
20	chr9:86567743-86567793	Jurkat	blood:	n/a
21	chr9:86594214-86594264	Jurkat	blood:	n/a
22	chr9:86597173-86597223	SKMC	muscle:	n/a
23	chr9:86572014-86572064	GM12891	blood:	n/a
24	chr9:86596281-86596331	IMR90	lung:	fetal
25	chr9:86571409-86571459	BJ	skin:	n/a
26	chr9:86594214-86594264	SKMC	muscle:	n/a
27	chr9:86595452-86595502	Hela-S3	cervix:	n/a
28	chr9:86573761-86573811	Jurkat	blood:	n/a
29	chr9:86571432-86571482	ECC-1	luminal epithelium:	n/a
30	chr9:86571432-86571482	CMK	blood:	n/a
31	chr9:86595151-86595201	HL-60	blood:	n/a
32	chr9:86597173-86597223	BE2_C	brain:	n/a
33	chr9:86569098-86569148	MCF-7	breast:	n/a
34	chr9:86567743-86567793	GM06990	blood:	n/a
35	chr9:86595151-86595201	ProgFib	skin:	n/a
36	chr9:86596124-86596174	BE2_C	brain:	n/a
37	chr9:86571904-86571954	HCT-116	colon:	n/a
38	chr9:86594416-86594466	MCF10A-Er-Src	breast:	n/a
39	chr9:86595264-86595314	GM12878	blood:	n/a
40	chr9:86594091-86594141	GM12878	blood:	n/a
41	chr9:86594416-86594466	GM12892	blood:	n/a
42	chr9:86594889-86594939	HepG2	liver:	n/a
43	chr9:86590550-86590600	H1-hESC	embryonic stem cell:	embryo
44	chr9:86594416-86594466	ovcar-3	ovarian:	n/a
45	chr9:86596281-86596331	HEEpiC	esophagus:	n/a
46	chr9:86567743-86567793	AG09309	skin:	n/a
47	chr9:86594889-86594939	NHBE	bronchial:	n/a
48	chr9:86594091-86594141	MCF-7	breast:	n/a
49	chr9:86594091-86594141	HRE	kidney:	n/a
50	chr9:86597173-86597223	HNPCEpiC	eye:	n/a

(count:104 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:86552635..86553455-chr9:86929530..86930770,4	MCF-7	breast:
2	chr9:86543303..86546156-chr9:86594809..86597216,2	K562	blood:
3	chr9:86548981..86555040-chr9:86588754..86596573,13	MCF-7	breast:
4	chr9:86533593..86537892-chr9:86593047..86598677,10	K562	blood:
5	chr9:86579856..86582669-chr9:86606095..86609007,3	K562	blood:
6	chr9:86552479..86553254-chr9:86875743..86876720,3	K562	blood:
7	chr15:66796716..66797533-chr9:86595214..86595851,2	Hela-S3	cervix:
8	chr17:80250206..80251061-chr9:86594587..86595234,2	Hela-S3	cervix:
9	chr9:86545280..86547707-chr9:86930734..86934388,3	MCF-7	breast:
10	chr3:184080676..184081504-chr9:86595141..86595996,2	NB4	blood:
11	chr15:44828332..44829115-chr9:86594438..86595354,2	Hela-S3	cervix:
12	chr7:35840834..35841579-chr9:86595754..86596267,2	Hela-S3	cervix:
13	chr3:73159959..73160592-chr9:86571618..86572404,2	Hela-S3	cervix:
14	chr9:86544458..86547106-chr9:86589351..86591605,3	K562	blood:
15	chr9:86533247..86537973-chr9:86593370..86597981,20	MCF-7	breast:
16	chr9:86548960..86550790-chr9:86568981..86570981,2	MCF-7	breast:
17	chr3:14988158..14990908-chr9:86594139..86596513,2	MCF-7	breast:
18	chr17:71307579..71308450-chr9:86595541..86596511,2	Hela-S3	cervix:
19	chr12:56510343..56511008-chr9:86594409..86595109,2	Hela-S3	cervix:
20	chr9:86569929..86574114-chr9:86574225..86577710,5	MCF-7	breast:
21	chr9:86570737..86572270-chr9:86573976..86575561,2	K562	blood:
22	chr8:53372582..53373541-chr9:86594741..86595608,2	Hela-S3	cervix:
23	chr11:94799931..94800625-chr9:86595070..86595772,2	Hela-S3	cervix:
24	chr9:86566614..86568645-chr9:86588942..86591883,2	K562	blood:
25	chr9:86562055..86565176-chr9:86569672..86571834,3	MCF-7	breast:
26	chr9:86534561..86538164-chr9:86570673..86573880,3	K562	blood:
27	chr9:86555752..86558711-chr9:86579434..86581068,2	K562	blood:
28	chr6:33359301..33359882-chr9:86594730..86595587,2	Hela-S3	cervix:
29	chr11:62609023..62610551-chr9:86593862..86596703,2	MCF-7	breast:
30	chr15:75940235..75940930-chr9:86595138..86596000,2	Hela-S3	cervix:
31	chr19:49228274..49229018-chr9:86595338..86596004,2	Hela-S3	cervix:
32	chr9:86596431..86597964-chr9:86790384..86792267,2	MCF-7	breast:
33	chr9:86548960..86550790-chr9:86568981..86570981,2	MCF-7	breast:
34	chr9:86551370..86553240-chr9:86557554..86559080,2	MCF-7	breast:
35	chr11:18655371..18656340-chr9:86595063..86595728,2	NB4	blood:
36	chr9:86552562..86553446-chr9:86787709..86788677,4	K562	blood:
37	chr9:86566551..86568592-chr9:86569030..86570936,2	K562	blood:
38	chr10:90639734..90640291-chr9:86595257..86596036,2	Hela-S3	cervix:
39	chr7:98922926..98923573-chr9:86571634..86572370,2	Hela-S3	cervix:
40	chr9:86550607..86552795-chr9:86930808..86933198,2	MCF-7	breast:
41	chr12:46766121..46766688-chr9:86595377..86596150,2	Hela-S3	cervix:
42	chr9:86601633..86604619-chr9:86768972..86770612,2	K562	blood:
43	chr12:77272410..77273249-chr9:86594788..86595326,2	Hela-S3	cervix:
44	chr9:86237033..86239481-chr9:86571525..86573399,2	MCF-7	breast:
45	chr9:86320289..86324589-chr9:86593742..86599530,6	K562	blood:
46	chr9:86551370..86553240-chr9:86557554..86559080,2	MCF-7	breast:
47	chr9:86551919..86553846-chr9:86578831..86580851,2	K562	blood:
48	chr18:12376849..12377806-chr9:86594670..86595620,2	Hela-S3	cervix:
49	chr9:86552677..86553242-chr9:86929937..86930812,2	K562	blood:
50	chr2:203129679..203130563-chr9:86595056..86595797,2	Hela-S3	cervix:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RMI1-1	chr9:86587148-86587192	ENSG00000235298.1
2	lnc-RMI1-1	chr9:86590348-86590692	ENSG00000235298.1

miRNA name	Chromosome Location	mirBase accession
hsa-miR-7-1-3p	chr9:86584686-86584707	MIMAT0004553
hsa-miR-7-5p	chr9:86584727-86584749	MIMAT0000252_2

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	HNRNPK	hsa-miR-21-5p	chr9:86583583-86583604
2	HNRNPK	hsa-miR-30c-5p	chr9:86584206-86584228

Variant related genes	Relation type
C9orf64	TF binding region
MIR7-1	TF binding region
RMI1	TF binding region
ENSG00000202523	TF binding region
HNRNPK	TF binding region
ENSG00000235298	TF binding region
C9orf64	CpG island
MIR7-1	CpG island
RMI1	CpG island
ENSG00000202523	CpG island
HNRNPK	CpG island
ENSG00000235298	CpG island
ENSG00000105939	chromatin interactions
ENSG00000236514	chromatin interactions
ENSG00000138134	chromatin interactions
ENSG00000143158	chromatin interactions
ENSG00000173548	chromatin interactions
ENSG00000113575	chromatin interactions
ENSG00000055044	chromatin interactions
ENSG00000111678	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000197506	chromatin interactions
ENSG00000271885	chromatin interactions
ENSG00000083223	chromatin interactions
ENSG00000100219	chromatin interactions
ENSG00000177971	chromatin interactions
ENSG00000148057	chromatin interactions
ENSG00000163584	chromatin interactions
ENSG00000241685	chromatin interactions
ENSG00000162004	chromatin interactions
ENSG00000179523	chromatin interactions
ENSG00000165119	chromatin interactions
ENSG00000206597	chromatin interactions
ENSG00000143164	chromatin interactions
ENSG00000165118	chromatin interactions
ENSG00000177463	chromatin interactions
ENSG00000165138	chromatin interactions
ENSG00000179119	chromatin interactions
ENSG00000174444	chromatin interactions
ENSG00000147488	chromatin interactions
ENSG00000178966	chromatin interactions
ENSG00000141140	chromatin interactions
ENSG00000166192	chromatin interactions
ENSG00000163882	chromatin interactions
ENSG00000141385	chromatin interactions
ENSG00000135018	chromatin interactions
ENSG00000238923	chromatin interactions
ENSG00000225733	chromatin interactions
ENSG00000180771	chromatin interactions
ENSG00000166441	chromatin interactions
ENSG00000243660	chromatin interactions
ENSG00000254473	chromatin interactions
ENSG00000105538	chromatin interactions
ENSG00000165115	chromatin interactions
ENSG00000202523	chromatin interactions
ENSG00000066933	chromatin interactions
ENSG00000134852	chromatin interactions
ENSG00000125968	chromatin interactions
ENSG00000184886	chromatin interactions
ENSG00000198105	chromatin interactions
ENSG00000229117	chromatin interactions
ENSG00000223247	chromatin interactions
ENSG00000175183	chromatin interactions
ENSG00000237649	chromatin interactions
ENSG00000174442	chromatin interactions
ENSG00000265692	chromatin interactions
ENSG00000226471	chromatin interactions
ENSG00000103253	chromatin interactions
ENSG00000179604	chromatin interactions
ENSG00000214756	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000228393	chromatin interactions
ENSG00000124164	chromatin interactions
ENSG00000062716	chromatin interactions
ENSG00000199377	chromatin interactions
ZNF792	Mature miRNA region
CTC1	Mature miRNA region
CIRH1A	Mature miRNA region
TBC1D1	Mature miRNA region
HUWE1	Mature miRNA region
SMS	Mature miRNA region
CDC5L	Mature miRNA region

Extended variants
information (count: 2251 )
Associated
traits (count: 73 )

Variant overlapped rSNPs/rCNVs (count:2251 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs567500171	chr9:86545968-86545969	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs534004079	chr9:86546068-86546069	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs534933874	chr9:86546096-86546097	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs553853569	chr9:86546162-86546163	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs547064181	chr9:86546194-86546195	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs571662059	chr9:86546202-86546203	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs140964175	chr9:86546225-86546226	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs557100551	chr9:86546261-86546262	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs575459041	chr9:86546283-86546284	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs368800265	chr9:86546405-86546406	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs536532886	chr9:86546430-86546431	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs76883147	chr9:86546470-86546471	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs573069940	chr9:86546504-86546505	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs150247075	chr9:86546552-86546553	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs564951566	chr9:86546585-86546586	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs576867530	chr9:86546587-86546588	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs114099625	chr9:86546595-86546596	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs112452464	chr9:86546619-86546620	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs186490973	chr9:86546665-86546666	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs567285482	chr9:86546719-86546720	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs549264933	chr9:86546721-86546722	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs561288775	chr9:86546788-86546789	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs375527732	chr9:86546796-86546797	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs560779637	chr9:86546799-86546800	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs546883796	chr9:86546807-86546808	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs57856480	chr9:86546809-86546810	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs59676293	chr9:86546817-86546818	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs60935039	chr9:86546839-86546840	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs57125008	chr9:86546842-86546843	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs201559141	chr9:86546843-86546844	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs571689417	chr9:86546851-86546852	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs538774542	chr9:86546855-86546856	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs140275924	chr9:86546877-86546878	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs138505848	chr9:86546880-86546881	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs201173210	chr9:86546881-86546882	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs369613398	chr9:86546884-86546885	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs11140300	chr9:86546885-86546886	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs199635486	chr9:86546888-86546889	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs200560824	chr9:86546889-86546890	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs71498079	chr9:86546892-86546893	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs372810450	chr9:86546897-86546898	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs371367743	chr9:86546909-86546910	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs145915525	chr9:86546926-86546927	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs138460404	chr9:86546930-86546931	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs377454592	chr9:86546931-86546932	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs536690262	chr9:86546934-86546935	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs11140301	chr9:86546938-86546939	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs12685316	chr9:86546942-86546943	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs200715789	chr9:86546946-86546947	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs147165261	chr9:86546950-86546951	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:73)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Urothelial cell carcinoma	18451213	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Renal cell carcinoma	18765545	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:2433 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:86536600-86571000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr9:86537000-86553600	Weak transcription	Fetal Intestine Small	intestine
3	chr9:86537000-86553600	Weak transcription	Thymus	Thymus
4	chr9:86542000-86546400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr9:86543000-86547000	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr9:86543000-86571000	Weak transcription	Esophagus	oesophagus
7	chr9:86544000-86552400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr9:86545400-86550400	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr9:86545600-86547400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr9:86545800-86548000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr9:86546000-86547800	Enhancers	Dnd41	blood
12	chr9:86546000-86548000	Enhancers	Hela-S3	cervix
13	chr9:86546000-86548600	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr9:86546200-86546400	Enhancers	GM12878-XiMat	blood
15	chr9:86546200-86547400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr9:86546200-86547400	Enhancers	NHEK	skin
17	chr9:86546400-86546600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr9:86546400-86546800	Enhancers	Fetal Thymus	thymus
19	chr9:86546400-86547200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr9:86546400-86547200	Enhancers	Primary T cells from cord blood	blood
21	chr9:86546400-86547200	Enhancers	Primary hematopoietic stem cells	blood
22	chr9:86546400-86547200	Enhancers	Primary hematopoietic stem cells short term culture	blood
23	chr9:86546400-86547200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
24	chr9:86546400-86547200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr9:86546400-86547400	Weak transcription	GM12878-XiMat	blood
26	chr9:86546400-86550400	Enhancers	Placenta	Placenta
27	chr9:86546600-86546800	Enhancers	Primary T cells fromperipheralblood	blood
28	chr9:86546600-86547200	Enhancers	HMEC	breast
29	chr9:86546600-86548600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr9:86546800-86553400	Weak transcription	Primary T cells fromperipheralblood	blood
31	chr9:86546800-86553600	Weak transcription	Fetal Thymus	thymus
32	chr9:86547000-86547200	Enhancers	Primary T helper cells fromperipheralblood	blood
33	chr9:86547000-86548600	Enhancers	Primary neutrophils fromperipheralblood	blood
34	chr9:86547200-86548000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
35	chr9:86547200-86548600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr9:86547200-86548600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr9:86547200-86548600	Weak transcription	HMEC	breast
38	chr9:86547200-86549000	Weak transcription	Primary hematopoietic stem cells	blood
39	chr9:86547200-86553600	Weak transcription	Primary T cells from cord blood	blood
40	chr9:86547200-86553800	Weak transcription	Primary T helper cells fromperipheralblood	blood
41	chr9:86547200-86570200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
42	chr9:86547400-86548000	Enhancers	GM12878-XiMat	blood
43	chr9:86547400-86548600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr9:86547400-86548600	Weak transcription	NHEK	skin
45	chr9:86547400-86549000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr9:86547800-86549000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr9:86547800-86554200	Weak transcription	Dnd41	blood
48	chr9:86548000-86548400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr9:86548000-86548400	Weak transcription	Hela-S3	cervix
50	chr9:86548000-86549400	Enhancers	Primary B cells from cord blood	blood

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