Variant report

Variant nsv1053818
Chromosome Location chr13:39512274-39533011
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:39514800-39524200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr13:39515200-39515600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr13:39515200-39515800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr13:39515200-39516200 Enhancers Muscle Satellite Cultured Cells --
5 chr13:39520000-39520200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
6 chr13:39520200-39541600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr13:39521200-39521600 Enhancers ES-I3 Cell Line embryonic stem cell
8 chr13:39521200-39521600 Enhancers Colon Smooth Muscle Colon
9 chr13:39521200-39523400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr13:39521400-39521800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr13:39521800-39526200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr13:39525000-39525600 Enhancers iPS-15b Cell Line embryonic stem cell
13 chr13:39525200-39525400 Enhancers Pancreas Pancrea
14 chr13:39525400-39526400 Enhancers Rectal Mucosa Donor 31 rectum
15 chr13:39525400-39526800 Weak transcription Pancreas Pancrea
16 chr13:39525600-39525800 Enhancers HUVEC blood vessel
17 chr13:39525800-39526400 Enhancers Cortex derived primary cultured neurospheres brain
18 chr13:39525800-39526400 Active TSS Pancreatic Islets Pancreatic Islet
19 chr13:39525800-39526400 Active TSS Rectal Mucosa Donor 29 rectum
20 chr13:39525800-39526400 Flanking Active TSS HUVEC blood vessel
21 chr13:39525800-39526600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr13:39526000-39526200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
23 chr13:39526000-39526200 Active TSS Adipose Nuclei Adipose
24 chr13:39526000-39526200 Active TSS Duodenum Mucosa Duodenum
25 chr13:39526000-39526400 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr13:39526000-39526400 Active TSS Right Atrium heart
27 chr13:39526200-39526400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
28 chr13:39526200-39526400 Flanking Active TSS Adipose Nuclei Adipose
29 chr13:39526200-39526600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr13:39526200-39526600 Enhancers Brain Inferior Temporal Lobe brain
31 chr13:39526200-39526600 Flanking Active TSS Duodenum Mucosa Duodenum
32 chr13:39526200-39526600 Enhancers Fetal Intestine Small intestine
33 chr13:39526200-39527000 Enhancers HMEC breast
34 chr13:39526200-39529200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr13:39526400-39526600 Enhancers HUVEC blood vessel
36 chr13:39526400-39526800 Enhancers Brain Cingulate Gyrus brain
37 chr13:39526600-39528000 Enhancers NHEK skin
38 chr13:39526600-39528200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr13:39526800-39527000 Enhancers Pancreas Pancrea
40 chr13:39526800-39527200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr13:39527000-39527800 Weak transcription Pancreas Pancrea
42 chr13:39527000-39528200 Weak transcription HMEC breast
43 chr13:39527800-39528000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr13:39527800-39528000 Enhancers Pancreas Pancrea
45 chr13:39528000-39532000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr13:39528200-39529200 Enhancers HMEC breast
47 chr13:39528600-39528800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr13:39532000-39532200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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