Variant report

Variant	rs73449935
Chromosome Location	chr13:39514825-39514826
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10220044	0.95[EUR][1000 genomes]
rs10492693	0.95[EUR][1000 genomes]
rs10492694	0.95[EUR][1000 genomes]
rs10492695	0.95[EUR][1000 genomes]
rs10492696	0.95[EUR][1000 genomes]
rs11839336	0.95[EUR][1000 genomes]
rs11843499	0.95[EUR][1000 genomes]
rs41451545	0.95[EUR][1000 genomes]
rs55968361	0.95[EUR][1000 genomes]
rs56112413	0.95[EUR][1000 genomes]
rs56236747	0.95[EUR][1000 genomes]
rs56305249	0.95[EUR][1000 genomes]
rs56907865	0.95[EUR][1000 genomes]
rs57433722	0.95[EUR][1000 genomes]
rs58046641	0.95[EUR][1000 genomes]
rs58370881	0.95[EUR][1000 genomes]
rs59380005	0.95[EUR][1000 genomes]
rs59459164	0.95[EUR][1000 genomes]
rs59972103	0.95[EUR][1000 genomes]
rs60085625	0.95[EUR][1000 genomes]
rs60285569	0.95[EUR][1000 genomes]
rs73449910	0.89[EUR][1000 genomes]
rs73449941	0.95[EUR][1000 genomes]
rs73449988	0.95[EUR][1000 genomes]
rs73451803	0.95[EUR][1000 genomes]
rs73451806	0.95[EUR][1000 genomes]
rs73451807	0.95[EUR][1000 genomes]
rs73451812	0.95[EUR][1000 genomes]
rs73451815	0.95[EUR][1000 genomes]
rs73451817	0.95[EUR][1000 genomes]
rs73451821	0.95[EUR][1000 genomes]
rs73451824	0.95[EUR][1000 genomes]
rs73451826	0.95[EUR][1000 genomes]
rs73451828	0.95[EUR][1000 genomes]
rs73451831	0.95[EUR][1000 genomes]
rs73451833	0.95[EUR][1000 genomes]
rs73451852	0.95[EUR][1000 genomes]
rs73451862	0.95[EUR][1000 genomes]
rs73451869	0.95[EUR][1000 genomes]
rs73451871	0.95[EUR][1000 genomes]
rs73451872	0.95[EUR][1000 genomes]
rs73451876	0.95[EUR][1000 genomes]
rs73451890	0.95[EUR][1000 genomes]
rs74050304	0.95[EUR][1000 genomes]
rs74050307	0.95[EUR][1000 genomes]
rs74050308	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754118	chr13:39347702-40222644	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv1053818	chr13:39512274-39533011	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:39514800-39524200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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