Variant report

Variant	nsv1053924
Chromosome Location	chr15:76803849-77089079
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1128)
CpG islands
(count:183)
Chromatin interactive
region (count:43)
LncRNA
region (count:2)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:1128 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:76806361-76807005	HepG2	liver:	n/a	n/a
2	ARID3A	chr15:76865111-76865365	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:76935433-76935442	HepG2	liver:	n/a	n/a
4	ARID3A	chr15:76825612-76826689	HepG2	liver:	n/a	n/a
5	ATF2	chr15:76867545-76868188	GM12878	blood:	n/a	n/a
6	ATF2	chr15:77003716-77004122	GM12878	blood:	n/a	n/a
7	ATF2	chr15:76867574-76868256	GM12878	blood:	n/a	n/a
8	ATF2	chr15:77003703-77004047	GM12878	blood:	n/a	n/a
9	BATF	chr15:76996451-76996676	GM12878	blood:	n/a	n/a
10	BATF	chr15:76907137-76907384	GM12878	blood:	n/a	n/a
11	BATF	chr15:76868780-76869125	GM12878	blood:	n/a	n/a
12	BATF	chr15:76946679-76946925	GM12878	blood:	n/a	n/a
13	BATF	chr15:76907151-76907359	GM12878	blood:	n/a	n/a
14	BATF	chr15:76867553-76868299	GM12878	blood:	n/a	n/a
15	BATF	chr15:76996436-76996655	GM12878	blood:	n/a	n/a
16	BATF	chr15:76946672-76946896	GM12878	blood:	n/a	n/a
17	BATF	chr15:76867629-76868083	GM12878	blood:	n/a	n/a
18	BCL11A	chr15:77003630-77004113	GM12878	blood:	n/a	n/a
19	BCL11A	chr15:76867646-76868017	GM12878	blood:	n/a	n/a
20	BCL11A	chr15:77003618-77004150	GM12878	blood:	n/a	n/a
21	BCL11A	chr15:76946684-76946864	GM12878	blood:	n/a	n/a
22	BCL11A	chr15:76867571-76868071	GM12878	blood:	n/a	n/a
23	BCL3	chr15:76825735-76826094	GM12878	blood:	n/a	n/a
24	BCL3	chr15:76867594-76868106	GM12878	blood:	n/a	n/a
25	BCL3	chr15:76867671-76868118	GM12878	blood:	n/a	n/a
26	BCL3	chr15:76825763-76826141	GM12878	blood:	n/a	n/a
27	BCLAF1	chr15:76867350-76868205	GM12878	blood:	n/a	n/a
28	BCLAF1	chr15:77003650-77004026	GM12878	blood:	n/a	n/a
29	BCLAF1	chr15:76867603-76868092	GM12878	blood:	n/a	n/a
30	BHLHE40	chr15:76867676-76868010	GM12878	blood:	n/a	n/a
31	BHLHE40	chr15:76946680-76946809	GM12878	blood:	n/a	n/a
32	BHLHE40	chr15:77003580-77004137	GM12878	blood:	n/a	n/a
33	BRCA1	chr15:76969668-76969722	H1-hESC	embryonic stem cell:	n/a	n/a
34	BRCA1	chr15:76805598-76805611	H1-hESC	embryonic stem cell:	n/a	n/a
35	CBX3	chr15:77069334-77069671	K562	blood:	n/a	n/a
36	CBX3	chr15:77055892-77056260	K562	blood:	n/a	n/a
37	CBX3	chr15:77055938-77056220	K562	blood:	n/a	n/a
38	CBX3	chr15:76928484-76928676	K562	blood:	n/a	n/a
39	CBX3	chr15:76928439-76928711	K562	blood:	n/a	n/a
40	CBX3	chr15:77069395-77069686	K562	blood:	n/a	n/a
41	CEBPB	chr15:76865274-76865637	IMR90	lung:	n/a	chr15:76865442-76865453
42	CEBPB	chr15:76825764-76826110	HepG2	liver:	n/a	chr15:76825991-76826004 chr15:76825947-76825958
43	CEBPB	chr15:76825720-76826202	A549	lung:	n/a	chr15:76825991-76826004 chr15:76825947-76825958
44	CEBPB	chr15:76857146-76857335	Hela-S3	cervix:	n/a	chr15:76857283-76857294
45	CEBPB	chr15:76953585-76953673	A549	lung:	n/a	n/a
46	CEBPB	chr15:76960844-76961108	A549	lung:	n/a	n/a
47	CEBPB	chr15:76857129-76857461	A549	lung:	n/a	chr15:76857283-76857294
48	CEBPB	chr15:76825775-76826096	IMR90	lung:	n/a	chr15:76825991-76826004 chr15:76825947-76825958
49	CEBPB	chr15:77028334-77028569	A549	lung:	n/a	n/a
50	CEBPB	chr15:77048788-77049111	IMR90	lung:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:76868964-76869014	K562	blood:	n/a
2	chr15:77085390-77085440	HNPCEpiC	eye:	n/a
3	chr15:76868964-76869014	ECC-1	luminal epithelium:	n/a
4	chr15:77085390-77085440	AG04449	skin:	fetal
5	chr15:76901065-76901115	BJ	skin:	n/a
6	chr15:77085390-77085440	SAEC	small airway:	n/a
7	chr15:76868964-76869014	SK-N-SH_RA	brain:	n/a
8	chr15:76868964-76869014	HEK293	kidney:	embryo
9	chr15:77085390-77085440	NHBE	bronchial:	n/a
10	chr15:76901065-76901115	RPTEC	kidney:	n/a
11	chr15:76901065-76901115	Jurkat	blood:	n/a
12	chr15:76901065-76901115	NHDF-neo	bronchial:	n/a
13	chr15:77085390-77085440	HRPEpiC	eye:	n/a
14	chr15:77085390-77085440	SK-N-MC	brain:	n/a
15	chr15:76901065-76901115	MCF10A-Er-Src	breast:	n/a
16	chr15:77085390-77085440	A549	lung:	n/a
17	chr15:76868964-76869014	T-47D	breast:	n/a
18	chr15:77085390-77085440	SK-N-SH	brain:	n/a
19	chr15:76901065-76901115	HEK293	kidney:	embryo
20	chr15:77085390-77085440	H1-hESC	embryonic stem cell:	embryo
21	chr15:77085390-77085440	HCF	heart:	n/a
22	chr15:76868964-76869014	PrEC	prostate:	n/a
23	chr15:76901065-76901115	PFSK-1	brain:	n/a
24	chr15:76868964-76869014	BE2_C	brain:	n/a
25	chr15:76868964-76869014	GM06990	blood:	n/a
26	chr15:77085390-77085440	IMR90	lung:	fetal
27	chr15:76901065-76901115	AG10803	skin:	n/a
28	chr15:76868964-76869014	PANC-1	pancreas:	n/a
29	chr15:76901065-76901115	ECC-1	luminal epithelium:	n/a
30	chr15:76868964-76869014	SKMC	muscle:	n/a
31	chr15:77085390-77085440	PFSK-1	brain:	n/a
32	chr15:77085390-77085440	GM12892	blood:	n/a
33	chr15:76868964-76869014	U87	brain:	n/a
34	chr15:76868964-76869014	GM19239	blood:	n/a
35	chr15:77085390-77085440	Caco-2	colon:	n/a
36	chr15:76868964-76869014	HRE	kidney:	n/a
37	chr15:76901065-76901115	U87	brain:	n/a
38	chr15:76901065-76901115	HCPEpiC	choroid plexus:	n/a
39	chr15:76868964-76869014	AG09319	gingival:	n/a
40	chr15:77085390-77085440	MCF-7	breast:	n/a
41	chr15:77085390-77085440	HEEpiC	esophagus:	n/a
42	chr15:76868964-76869014	ovcar-3	ovarian:	n/a
43	chr15:77085390-77085440	Jurkat	blood:	n/a
44	chr15:76868964-76869014	AG04449	skin:	fetal
45	chr15:76901065-76901115	HCM	heart:	n/a
46	chr15:77085390-77085440	AG09309	skin:	n/a
47	chr15:76901065-76901115	MCF-7	breast:	n/a
48	chr15:77085390-77085440	HCT-116	colon:	n/a
49	chr15:76901065-76901115	AG09319	gingival:	n/a
50	chr15:76901065-76901115	H1-hESC	embryonic stem cell:	embryo

(count:43 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:76997314..76998845-chr15:77007470..77009179,2	MCF-7	breast:
2	chr15:77044758..77046845-chr15:77050241..77052508,2	MCF-7	breast:
3	chr15:76964455..76968844-chr15:76969640..76972722,4	K562	blood:
4	chr15:76967596..76970375-chr15:76976896..76979262,2	K562	blood:
5	chr15:76997314..76998845-chr15:77007470..77009179,2	MCF-7	breast:
6	chr15:76855877..76857707-chr15:76866696..76869240,2	MCF-7	breast:
7	chr15:76493051..76495991-chr15:76813493..76815400,2	MCF-7	breast:
8	chr15:76812872..76815537-chr15:76817323..76820278,2	MCF-7	breast:
9	chr15:77085685..77088111-chr15:77091340..77093808,2	K562	blood:
10	chr15:77051074..77052943-chr15:77058188..77061067,2	K562	blood:
11	chr15:76934897..76935640-chr15:77158999..77159764,3	MCF-7	breast:
12	chr15:76877558..76879609-chr15:76881319..76882907,2	K562	blood:
13	chr15:76934226..76937075-chr15:76948287..76950112,2	MCF-7	breast:
14	chr15:76969596..76972550-chr15:76979737..76981959,2	MCF-7	breast:
15	chr15:77083317..77084988-chr15:77087176..77089675,2	K562	blood:
16	chr15:76967596..76970375-chr15:76976896..76979262,2	K562	blood:
17	chr15:77083317..77084988-chr15:77087176..77089675,2	K562	blood:
18	chr15:77022336..77024619-chr15:77130860..77133173,2	MCF-7	breast:
19	chr15:76934737..76935336-chr15:77133237..77133799,2	MCF-7	breast:
20	chr15:76821101..76824629-chr15:76825214..76826999,4	K562	blood:
21	chr15:76959064..76961382-chr15:76964223..76965946,2	MCF-7	breast:
22	chr10:94276542..94277057-chr15:77040784..77041284,2	MCF-7	breast:
23	chr15:77052021..77055015-chr15:77055082..77056903,3	K562	blood:
24	chr15:76803456..76806308-chr15:77131835..77134067,2	MCF-7	breast:
25	chr15:76812872..76815537-chr15:76817323..76820278,2	MCF-7	breast:
26	chr15:76810534..76813037-chr15:76815373..76817326,2	MCF-7	breast:
27	chr15:76978559..76980160-chr15:76982250..76984451,2	MCF-7	breast:
28	chr15:76789083..76790896-chr15:76806122..76808106,2	MCF-7	breast:
29	chr15:77052021..77055015-chr15:77055082..77056903,3	K562	blood:
30	chr15:76959064..76961382-chr15:76964223..76965946,2	MCF-7	breast:
31	chr15:77017797..77020777-chr8:43093705..43096561,2	K562	blood:
32	chr15:76855877..76857707-chr15:76866696..76869240,2	MCF-7	breast:
33	chr15:76821101..76824629-chr15:76825214..76826999,4	K562	blood:
34	chr15:76969596..76972550-chr15:76979737..76981959,2	MCF-7	breast:
35	chr15:77051074..77052943-chr15:77058188..77061067,2	K562	blood:
36	chr15:76978559..76980160-chr15:76982250..76984451,2	MCF-7	breast:
37	chr15:77024348..77024882-chr15:77132939..77133789,2	MCF-7	breast:
38	chr15:76934226..76937075-chr15:76948287..76950112,2	MCF-7	breast:
39	chr15:76964455..76968844-chr15:76969640..76972722,4	K562	blood:
40	chr15:76810534..76813037-chr15:76815373..76817326,2	MCF-7	breast:
41	chr15:77044758..77046845-chr15:77050241..77052508,2	MCF-7	breast:
42	chr15:76482009..76484403-chr15:77035735..77037455,2	MCF-7	breast:
43	chr11:60896554..60897446-chr15:76806259..76806955,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ETFA-5	chr15:76833537-76833934	NONHSAT047406
2	lnc-RCN2-1	chr15:77028982-77029321	NONHSAT047408

miRNA name	Chromosome Location	mirBase accession
hsa-miR-3713	chr15:76878988-76879007	MIMAT0018164

No data

Variant related genes	Relation type
SCAPER	TF binding region
RN7SKP217	TF binding region
MIR3713	TF binding region
SCAPER	CpG island
RN7SKP217	CpG island
MIR3713	CpG island
ENSG00000266449	chromatin interactions
ENSG00000169758	chromatin interactions
ENSG00000140386	chromatin interactions

Extended variants
information (count: 10051 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:10051 , 50 per page) page: 1 2 3 4 5 6 7 ... 202

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs17364714	chr15:76803961-76803962	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs574698830	chr15:76804043-76804044	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs370153510	chr15:76804068-76804069	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs76259176	chr15:76804077-76804078	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs557096513	chr15:76804148-76804149	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs144159437	chr15:76804171-76804172	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs543474310	chr15:76804172-76804173	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs151255382	chr15:76804184-76804185	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs369526162	chr15:76804185-76804186	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs283801	chr15:76804186-76804187	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs201866281	chr15:76804188-76804189	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs537458	chr15:76804214-76804215	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs201103365	chr15:76804216-76804217	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs377548295	chr15:76804218-76804219	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs369937959	chr15:76804220-76804221	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs372345219	chr15:76804225-76804226	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs199546277	chr15:76804226-76804227	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs12915374	chr15:76804228-76804229	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs12915378	chr15:76804230-76804231	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs147203948	chr15:76804241-76804242	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs532473720	chr15:76804322-76804323	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs138440261	chr15:76804332-76804333	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs576777835	chr15:76804379-76804380	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs552251362	chr15:76804398-76804399	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs541435492	chr15:76804417-76804418	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs112918261	chr15:76804448-76804449	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs528260365	chr15:76804465-76804466	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs572084185	chr15:76804480-76804481	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs8041308	chr15:76804538-76804539	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs200981174	chr15:76804556-76804557	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs140868054	chr15:76804558-76804559	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs16968316	chr15:76804619-76804620	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs531172356	chr15:76804703-76804704	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs16968319	chr15:76804730-76804731	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs142545086	chr15:76804732-76804733	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs146894073	chr15:76804733-76804734	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs74024136	chr15:76804784-76804785	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs56136313	chr15:76804786-76804787	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs111795920	chr15:76804824-76804825	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs139374963	chr15:76804841-76804842	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs557013128	chr15:76804858-76804859	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs568669475	chr15:76804881-76804882	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs539251292	chr15:76804913-76804914	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs558595866	chr15:76804978-76804979	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs576937843	chr15:76805107-76805108	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs62028459	chr15:76805203-76805204	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs36072561	chr15:76805205-76805206	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs66499175	chr15:76805206-76805207	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs78116412	chr15:76805220-76805221	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs77940052	chr15:76805222-76805223	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	17322880	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Autism	21480499	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	16864856	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Breast cancer	21611746	CNVD
Breast cancer	21364760	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Ovarian cancer	21781307	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD

Chromatin state (count:2773 , 50 per page) page: 1 2 3 4 5 6 7 ... 56

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:76725800-76812600	Weak transcription	Left Ventricle	heart
2	chr15:76788400-76813600	Weak transcription	Primary T cells fromperipheralblood	blood
3	chr15:76791200-76806200	Weak transcription	Fetal Muscle Leg	muscle
4	chr15:76794000-76810400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr15:76794200-76806400	Weak transcription	Gastric	stomach
6	chr15:76795200-76806800	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr15:76795800-76810600	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr15:76796400-76805200	Weak transcription	Fetal Intestine Large	intestine
9	chr15:76796800-76806400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr15:76797000-76805000	Weak transcription	Stomach Smooth Muscle	stomach
11	chr15:76797000-76806400	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr15:76797200-76804800	Weak transcription	Primary T cells from cord blood	blood
13	chr15:76797200-76806400	Weak transcription	Liver	Liver
14	chr15:76797400-76825000	Weak transcription	Primary B cells from cord blood	blood
15	chr15:76799800-76804800	Weak transcription	Fetal Intestine Small	intestine
16	chr15:76800400-76806000	Weak transcription	Duodenum Mucosa	Duodenum
17	chr15:76801000-76804600	Weak transcription	Fetal Heart	heart
18	chr15:76803800-76804000	Enhancers	HepG2	liver
19	chr15:76804000-76805400	Enhancers	Fetal Stomach	stomach
20	chr15:76804000-76805600	Weak transcription	HepG2	liver
21	chr15:76804600-76805000	Enhancers	Fetal Heart	heart
22	chr15:76804800-76805600	Strong transcription	Primary T cells from cord blood	blood
23	chr15:76804800-76808400	Enhancers	Fetal Intestine Small	intestine
24	chr15:76805000-76810200	Weak transcription	Fetal Heart	heart
25	chr15:76805200-76805600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr15:76805200-76805600	Enhancers	NHEK	skin
27	chr15:76805200-76808400	Enhancers	Fetal Intestine Large	intestine
28	chr15:76805400-76805600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr15:76805400-76805600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr15:76805400-76805600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
31	chr15:76805400-76805600	Enhancers	Duodenum Smooth Muscle	Duodenum
32	chr15:76805400-76805600	Enhancers	Stomach Smooth Muscle	stomach
33	chr15:76805400-76806000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr15:76805400-76810400	Weak transcription	Fetal Stomach	stomach
35	chr15:76805600-76805800	Enhancers	Pancreatic Islets	Pancreatic Islet
36	chr15:76805600-76806400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr15:76805600-76807200	Weak transcription	Duodenum Smooth Muscle	Duodenum
38	chr15:76805600-76808400	Enhancers	HepG2	liver
39	chr15:76805600-76845800	Weak transcription	Primary T cells from cord blood	blood
40	chr15:76805800-76806000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr15:76806000-76807800	Enhancers	Duodenum Mucosa	Duodenum
42	chr15:76806000-76808400	Enhancers	Brain Germinal Matrix	brain
43	chr15:76806200-76806600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr15:76806200-76807000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
45	chr15:76806400-76806600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
46	chr15:76806400-76806600	Enhancers	Rectal Mucosa Donor 29	rectum
47	chr15:76806400-76807600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr15:76806400-76808400	Enhancers	Liver	Liver
49	chr15:76806600-76807000	Weak transcription	Rectal Mucosa Donor 29	rectum
50	chr15:76806600-76807200	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links