Variant report

Variant	nsv1058849
Chromosome Location	chr17:17308009-17348548
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1133)
CpG islands
(count:122)
Chromatin interactive
region (count:62)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1133 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr17:17311738-17312301	HepG2	liver:	n/a	n/a
2	ARID3A	chr17:17321226-17322088	HepG2	liver:	n/a	n/a
3	ARID3A	chr17:17319340-17320485	HepG2	liver:	n/a	n/a
4	ARID3A	chr17:17343355-17343673	HepG2	liver:	n/a	n/a
5	ARID3A	chr17:17321122-17322055	K562	blood:	n/a	n/a
6	ARID3A	chr17:17336791-17336877	HepG2	liver:	n/a	n/a
7	ARID3A	chr17:17311868-17312068	K562	blood:	n/a	n/a
8	ARID3A	chr17:17338615-17338970	HepG2	liver:	n/a	n/a
9	ATF1	chr17:17311891-17312184	K562	blood:	n/a	n/a
10	ATF3	chr17:17319414-17319702	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF3	chr17:17319473-17319667	HepG2	liver:	n/a	n/a
12	ATF3	chr17:17338425-17338994	A549	lung:	n/a	n/a
13	ATF3	chr17:17319388-17319719	GM12878	blood:	n/a	n/a
14	ATF3	chr17:17319307-17319849	HepG2	liver:	n/a	n/a
15	ATF3	chr17:17319440-17319645	K562	blood:	n/a	n/a
16	BACH1	chr17:17343409-17344051	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr17:17321747-17322020	K562	blood:	n/a	n/a
18	BACH1	chr17:17319791-17320009	H1-hESC	embryonic stem cell:	n/a	n/a
19	BCL3	chr17:17338460-17339116	A549	lung:	n/a	n/a
20	BCL3	chr17:17343257-17343960	A549	lung:	n/a	n/a
21	BHLHE40	chr17:17338684-17338974	K562	blood:	n/a	n/a
22	BHLHE40	chr17:17321714-17322180	K562	blood:	n/a	n/a
23	BRCA1	chr17:17311718-17312219	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr17:17338669-17338908	Hela-S3	cervix:	n/a	n/a
25	CBX3	chr17:17324967-17325222	K562	blood:	n/a	n/a
26	CBX3	chr17:17327816-17328343	K562	blood:	n/a	n/a
27	CBX3	chr17:17327856-17328305	K562	blood:	n/a	n/a
28	CBX3	chr17:17319342-17319684	K562	blood:	n/a	n/a
29	CBX3	chr17:17319186-17319749	K562	blood:	n/a	n/a
30	CBX3	chr17:17321657-17322036	K562	blood:	n/a	n/a
31	CBX3	chr17:17343171-17343831	HCT-116	colon:	n/a	n/a
32	CBX3	chr17:17343275-17343681	K562	blood:	n/a	n/a
33	CCNT2	chr17:17321734-17322036	K562	blood:	n/a	n/a
34	CEBPB	chr17:17336636-17336872	K562	blood:	n/a	chr17:17336722-17336733
35	CEBPB	chr17:17337800-17338180	HepG2	liver:	n/a	chr17:17337987-17337998
36	CEBPB	chr17:17336572-17336917	K562	blood:	n/a	chr17:17336722-17336733
37	CEBPB	chr17:17343316-17343661	HepG2	liver:	n/a	n/a
38	CEBPB	chr17:17319301-17319781	MCF-7	breast:	n/a	n/a
39	CEBPB	chr17:17336668-17336926	MCF-7	breast:	n/a	chr17:17336722-17336733
40	CEBPB	chr17:17336576-17336905	Hela-S3	cervix:	n/a	chr17:17336722-17336733
41	CEBPB	chr17:17321086-17321450	HepG2	liver:	n/a	n/a
42	CEBPB	chr17:17321021-17321441	K562	blood:	n/a	n/a
43	CEBPB	chr17:17346551-17346945	A549	lung:	n/a	chr17:17346672-17346683
44	CEBPB	chr17:17337787-17338208	A549	lung:	n/a	chr17:17337987-17337998
45	CEBPB	chr17:17319172-17320178	A549	lung:	n/a	n/a
46	CEBPB	chr17:17336657-17336909	ECC-1	luminal epithelium:	n/a	chr17:17336722-17336733
47	CEBPB	chr17:17337855-17338133	H1-hESC	embryonic stem cell:	n/a	chr17:17337987-17337998
48	CEBPB	chr17:17321113-17321381	IMR90	lung:	n/a	n/a
49	CEBPB	chr17:17319375-17319675	K562	blood:	n/a	n/a
50	CEBPB	chr17:17321781-17322041	K562	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr17:17343875-17343925	HCT-116	colon:	n/a
2	chr17:17338842-17338892	Caco-2	colon:	n/a
3	chr17:17343875-17343925	PANC-1	pancreas:	n/a
4	chr17:17343875-17343925	HUVEC	blood vessel:	n/a
5	chr17:17343875-17343925	T-47D	breast:	n/a
6	chr17:17343875-17343925	HRE	kidney:	n/a
7	chr17:17343875-17343925	ovcar-3	ovarian:	n/a
8	chr17:17343875-17343925	HL-60	blood:	n/a
9	chr17:17338842-17338892	HUVEC	blood vessel:	n/a
10	chr17:17338842-17338892	Hela-S3	cervix:	n/a
11	chr17:17338842-17338892	SAEC	small airway:	n/a
12	chr17:17343875-17343925	HAEpiC	amniotic membrane:	n/a
13	chr17:17343875-17343925	Hela-S3	cervix:	n/a
14	chr17:17338842-17338892	HEK293	kidney:	embryo
15	chr17:17338842-17338892	AoSMC	blood vessel:	n/a
16	chr17:17343875-17343925	SK-N-SH_RA	brain:	n/a
17	chr17:17343875-17343925	AG09309	skin:	n/a
18	chr17:17343875-17343925	SK-N-MC	brain:	n/a
19	chr17:17343875-17343925	NH-A	brain:	n/a
20	chr17:17338842-17338892	Hepatocyte	liver:	n/a
21	chr17:17343875-17343925	IMR90	lung:	fetal
22	chr17:17338842-17338892	SK-N-SH	brain:	n/a
23	chr17:17338842-17338892	NHDF-neo	bronchial:	n/a
24	chr17:17338842-17338892	NT2-D1	testis:	n/a
25	chr17:17338842-17338892	HepG2	liver:	n/a
26	chr17:17338842-17338892	ovcar-3	ovarian:	n/a
27	chr17:17343875-17343925	K562	blood:	n/a
28	chr17:17338842-17338892	RPTEC	kidney:	n/a
29	chr17:17343875-17343925	GM06990	blood:	n/a
30	chr17:17338842-17338892	CMK	blood:	n/a
31	chr17:17338842-17338892	BE2_C	brain:	n/a
32	chr17:17338842-17338892	HNPCEpiC	eye:	n/a
33	chr17:17338842-17338892	HRPEpiC	eye:	n/a
34	chr17:17343875-17343925	BJ	skin:	n/a
35	chr17:17338842-17338892	Jurkat	blood:	n/a
36	chr17:17343875-17343925	AG09319	gingival:	n/a
37	chr17:17338842-17338892	IMR90	lung:	fetal
38	chr17:17338842-17338892	NB4	blood:	n/a
39	chr17:17338842-17338892	HL-60	blood:	n/a
40	chr17:17338842-17338892	SKMC	muscle:	n/a
41	chr17:17338842-17338892	NHBE	bronchial:	n/a
42	chr17:17343875-17343925	GM12878	blood:	n/a
43	chr17:17343875-17343925	RPTEC	kidney:	n/a
44	chr17:17343875-17343925	PrEC	prostate:	n/a
45	chr17:17338842-17338892	SK-N-MC	brain:	n/a
46	chr17:17338842-17338892	HCT-116	colon:	n/a
47	chr17:17338842-17338892	K562	blood:	n/a
48	chr17:17343875-17343925	AoSMC	blood vessel:	n/a
49	chr17:17338842-17338892	ProgFib	skin:	n/a
50	chr17:17338842-17338892	AG10803	skin:	n/a

(count:62 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr17:17258968..17259852-chr17:17343043..17343948,2	K562	blood:
2	chr17:17313196..17314808-chr17:17317887..17319459,2	K562	blood:
3	chr17:17321962..17324766-chr17:17326555..17329436,3	K562	blood:
4	chr17:17324473..17327302-chr17:17336395..17338556,2	MCF-7	breast:
5	chr17:17329242..17331427-chr17:17343296..17345855,2	MCF-7	breast:
6	chr17:17335771..17338449-chr17:17342663..17345052,2	MCF-7	breast:
7	chr17:17347625..17349777-chr17:17725439..17727969,2	MCF-7	breast:
8	chr17:17305801..17308448-chr17:17312032..17314293,2	K562	blood:
9	chr17:17259250..17260032-chr17:17342972..17343523,2	MCF-7	breast:
10	chr17:17336920..17339471-chr17:17342851..17344452,2	MCF-7	breast:
11	chr17:17257302..17260550-chr17:17346867..17350783,4	MCF-7	breast:
12	chr17:17341170..17345071-chr17:17347034..17351413,6	MCF-7	breast:
13	chr17:17347048..17349813-chr17:17378788..17383911,5	MCF-7	breast:
14	chr17:17297235..17298837-chr17:17306470..17308847,2	K562	blood:
15	chr17:17347836..17349791-chr17:17356884..17358605,2	MCF-7	breast:
16	chr17:17344606..17346836-chr17:17348575..17350374,2	K562	blood:
17	chr17:17318799..17322004-chr17:17396586..17401319,4	MCF-7	breast:
18	chr17:17304591..17306249-chr17:17306462..17308766,2	MCF-7	breast:
19	chr17:17335195..17342131-chr17:17347291..17351486,7	MCF-7	breast:
20	chr17:17348329..17350736-chr18:19191275..19193632,2	MCF-7	breast:
21	chr17:17308878..17311513-chr17:17316490..17320191,4	MCF-7	breast:
22	chr17:17348389..17350727-chr17:17740115..17741953,2	MCF-7	breast:
23	chr17:17305801..17308448-chr17:17312032..17314293,2	K562	blood:
24	chr17:17306217..17309179-chr17:17398363..17401256,2	MCF-7	breast:
25	chr17:17335195..17342131-chr17:17347291..17351486,7	MCF-7	breast:
26	chr17:17346012..17348708-chr17:17349032..17351296,2	MCF-7	breast:
27	chr17:17345875..17348341-chr17:17739755..17742747,2	MCF-7	breast:
28	chr17:17347895..17349442-chr17:17385421..17387724,2	MCF-7	breast:
29	chr17:17303519..17305319-chr17:17347425..17348955,2	MCF-7	breast:
30	chr17:17291138..17292058-chr17:17343026..17343970,5	MCF-7	breast:
31	chr17:17341170..17345071-chr17:17347034..17351413,6	MCF-7	breast:
32	chr17:17264792..17266427-chr17:17348267..17350277,2	MCF-7	breast:
33	chr17:17337262..17338945-chr17:17347016..17349151,2	MCF-7	breast:
34	chr17:17338847..17340811-chr17:17396652..17398902,2	MCF-7	breast:
35	chr17:17336920..17339471-chr17:17342851..17344452,2	MCF-7	breast:
36	chr17:17319589..17321575-chr17:17348151..17350364,2	MCF-7	breast:
37	chr17:17340093..17354118-chr17:17394085..17402192,31	MCF-7	breast:
38	chr17:17321553..17324468-chr17:17587073..17589435,2	MCF-7	breast:
39	chr17:17345336..17348353-chr17:17348575..17352300,3	K562	blood:
40	chr17:17347145..17349329-chr17:17355004..17356599,2	MCF-7	breast:
41	chr17:17347016..17350522-chr17:17380134..17385375,9	MCF-7	breast:
42	chr17:17342531..17346072-chr17:17347773..17351460,6	MCF-7	breast:
43	chr17:17319589..17321575-chr17:17348151..17350364,2	MCF-7	breast:
44	chr17:17313196..17314808-chr17:17317887..17319459,2	K562	blood:
45	chr17:17346876..17348557-chr17:17721789..17724493,2	MCF-7	breast:
46	chr17:17290703..17292981-chr17:17343527..17346178,2	MCF-7	breast:
47	chr17:17321962..17324766-chr17:17326555..17329436,3	K562	blood:
48	chr17:17290573..17292126-chr17:17346940..17348569,2	MCF-7	breast:
49	chr17:17291681..17293275-chr17:17315308..17316852,2	MCF-7	breast:
50	chr17:17323645..17325361-chr17:17339131..17341105,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RASD1-1	chr17:17348295-17349118	NONHSAT146083

No data

Variant related genes	Relation type
ENSG00000227158	TF binding region
ENSG00000227158	CpG island
ENSG00000141026	chromatin interactions
ENSG00000108551	chromatin interactions
ENSG00000227158	chromatin interactions
ENSG00000167088	chromatin interactions
ENSG00000072310	chromatin interactions

Extended variants
information (count: 1623 )
Associated
traits (count: 162 )

Variant overlapped rSNPs/rCNVs (count:1623 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs8080681	chr17:17308009-17308010	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs35615783	chr17:17308046-17308047	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs560292513	chr17:17308071-17308072	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs530305511	chr17:17308095-17308096	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs528955463	chr17:17308114-17308115	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs139757986	chr17:17308118-17308119	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs78736012	chr17:17308125-17308126	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs554588219	chr17:17308141-17308142	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs16961654	chr17:17308205-17308206	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs551378096	chr17:17308231-17308232	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs71364024	chr17:17308234-17308235	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs539452518	chr17:17308287-17308288	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs552910892	chr17:17308288-17308289	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs564602464	chr17:17308292-17308293	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs372673190	chr17:17308333-17308334	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs533478961	chr17:17308451-17308452	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs374720168	chr17:17308466-17308467	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs535526183	chr17:17308475-17308476	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs377199560	chr17:17308479-17308480	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs181985445	chr17:17308520-17308521	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs550267387	chr17:17308582-17308583	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs563674228	chr17:17308643-17308644	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs77243134	chr17:17308687-17308688	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs186543984	chr17:17308778-17308779	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs564621012	chr17:17308821-17308822	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs191912407	chr17:17308880-17308881	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs181234331	chr17:17308901-17308902	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs560162965	chr17:17308925-17308926	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs34389187	chr17:17308958-17308959	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs8066326	chr17:17308984-17308985	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs562745205	chr17:17308999-17309000	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs880396	chr17:17309004-17309005	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs34500456	chr17:17309006-17309007	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs386795917	chr17:17309007-17309008	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs56145552	chr17:17309009-17309010	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs397857142	chr17:17309012-17309013	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs79138848	chr17:17309023-17309024	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs182306283	chr17:17309050-17309051	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs150925980	chr17:17309072-17309073	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs555568270	chr17:17309124-17309125	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs76439843	chr17:17309125-17309126	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs538056573	chr17:17309214-17309215	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs75411819	chr17:17309295-17309296	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs372824765	chr17:17309343-17309344	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs186714773	chr17:17309354-17309355	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs34955670	chr17:17309416-17309417	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs553838049	chr17:17309463-17309464	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs573670751	chr17:17309464-17309465	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs74877217	chr17:17309472-17309473	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs77517992	chr17:17309505-17309506	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:162)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Burkitt''s lymphoma	19759907	CNVD
Wilms tumour	21544195	CNVD
Esophageal adenocarcinoma	18519675	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Chordoma	21602918	CNVD
Miller-Dieker syndrome	22283845	CNVD
Non-syndromic sensorineural hearing loss	17457615	CNVD
Cancer	22429812	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Ewing''s sarcoma	21437220	CNVD
Follicular lymphoma	19010834	CNVD
Colorectal cancer	20709793	CNVD
Acute myeloid leukemia	16864856	CNVD
Endometrial cancer	22040021	CNVD
Paraganglioma	21461997	CNVD
Pheochromocytoma	21461997	CNVD
Breast cancer	22028636	CNVD
Breast cancer	20837533	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
colon cancer	17210682	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Basal cell lymphoma	17053054	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Cancer	16751803	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Chronic lymphocytic leukemia	17971485	CNVD
Basal cell lymphoma	17170743	CNVD
Breast cancer	16461572	CNVD
Colorectal cancer	16272173	CNVD
Follicular lymphoma	17170743	CNVD
Human rectal carcinomas	16397240	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Ovarian cancer	22174824	CNVD
Moyamoya disease	22323933	CNVD
small cell lung cancer	20016488	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	21251322	CNVD
Myelodysplastic syndrome	21251322	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20724749	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Acute myeloid leukemia	17237825	CNVD
Colorectal cancer	21645411	CNVD
HIV/AIDS	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
HIV/AIDS	17953491	CNVD
HIV/AIDS	20877625	CNVD
Immune disease	21076436	CNVD
Rheumatoid arthritis	17953491	CNVD
Type 1 diabetes	17953491	CNVD
HIV/AIDS	15637236	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Ovarian cancer	21781307	CNVD
Autism	22495311	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Neurofibromatosis	18196300	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Colorectal cancer	16774939	CNVD
Breast cancer	17001317	CNVD
Rhabdomyosarcoma	16790082	CNVD
Charcot-marie-tooth disease	16463004	CNVD
Osteosarcoma	22292074	CNVD
Breast cancer	17603634	CNVD
Charcot	16760730	CNVD
Mental retardation	17901693	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
ovarian endometriomas	16273235	CNVD
Ovarian cancer	21720365	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Gastric cancer	18160780	CNVD
Smith-Magenis syndrome	18923513	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Austim spectrum disorder	21302340	CNVD
Autism	22492990	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	18414209	CNVD
Developmental delay	21549014	CNVD
Epilepsy	20970697	CNVD
Mental retardation	18414209	CNVD
Mental retardation	21549014	CNVD
Smith-Magenis syndrome	21981782	CNVD
Smith-Magenis syndrome	20188345	CNVD
Smith-Magenis syndrome	16775514	CNVD
Smith-Magenis syndrome	22585170	CNVD
Smith-Magenis syndrome	22241247	CNVD
Autism	20970697	CNVD
Mental retardation	19951919	CNVD
Potocki-Lupski syndrome	21271655	CNVD
Potocki-lupski syndrome	17357070	CNVD
Potocki-lupski syndrome	20110824	CNVD
Potocki-lupski syndrome	18923514	CNVD
Potocki-lupski syndrome	22241247	CNVD
Potocki-lupski syndrome	20188345	CNVD
Schizophrenia	21399695	CNVD
Mental retardation	16773131	CNVD
Adenocarcinoma	19607727	CNVD
Squamous cell cancer	19607727	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Charcot-marie-tooth disease	22470819	CNVD
Neurofibromatosis	22470819	CNVD
Neuropathy	22470819	CNVD
Smith-Magenis syndrome	18301319	CNVD
Smith-Magenis syndrome	17357070	CNVD
Smith-Magenis syndrome	18469339	CNVD
Smith-Magenis syndrome	22241097	CNVD
Smith-Magenis syndrome	22470819	CNVD
Tourette syndrome	18923514	CNVD
Type 1 diabetes	22470819	CNVD
Potocki-lupski syndrome	18469339	CNVD
Follicular lymphoma	20505157	CNVD
T-cell lymphomas	19863542	CNVD
Neuropathy	17597781	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	17015230	CNVD
Smith-Magenis syndrome	17597781	CNVD
Potocki-lupski syndrome	18059269	CNVD
Potocki-lupski syndrome	17597781	CNVD
Mental retardation	17847001	CNVD
Multiple myeloma	16616336	CNVD
Breast cancer	20409316	CNVD
Breast cancer	21509527	CNVD
Ductal carcinoma	22052326	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Multiple myeloma	17550852	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Autism	22543975	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Cancer	17440070	CNVD

Chromatin state (count:851 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:17299800-17310400	Enhancers	Primary hematopoietic stem cells	blood
2	chr17:17302000-17318800	Weak transcription	Right Atrium	heart
3	chr17:17305000-17311400	Weak transcription	Pancreas	Pancrea
4	chr17:17305200-17309600	Weak transcription	Esophagus	oesophagus
5	chr17:17305800-17309200	Enhancers	Primary B cells from peripheral blood	blood
6	chr17:17306000-17308400	Enhancers	Primary B cells from cord blood	blood
7	chr17:17306000-17310000	Enhancers	Fetal Muscle Leg	muscle
8	chr17:17306200-17309600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
9	chr17:17306400-17308400	Enhancers	Fetal Brain Female	brain
10	chr17:17306400-17308800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr17:17306400-17309600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr17:17306600-17308200	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
13	chr17:17306600-17308400	Enhancers	Primary neutrophils fromperipheralblood	blood
14	chr17:17306600-17309200	Weak transcription	HepG2	liver
15	chr17:17306600-17315400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr17:17306800-17308200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
17	chr17:17306800-17308200	Flanking Active TSS	Thymus	Thymus
18	chr17:17306800-17309200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr17:17306800-17309200	Weak transcription	Hela-S3	cervix
20	chr17:17307000-17311400	Weak transcription	Osteobl	bone
21	chr17:17307200-17316600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr17:17307400-17308200	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr17:17307400-17308200	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
24	chr17:17307600-17308800	Flanking Active TSS	Dnd41	blood
25	chr17:17307600-17309800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr17:17307600-17310000	Enhancers	Primary T cells fromperipheralblood	blood
27	chr17:17307600-17310200	Enhancers	Brain Germinal Matrix	brain
28	chr17:17307800-17308800	Weak transcription	Brain Anterior Caudate	brain
29	chr17:17307800-17308800	Enhancers	Fetal Muscle Trunk	muscle
30	chr17:17307800-17309000	Weak transcription	Adipose Nuclei	Adipose
31	chr17:17307800-17309200	Weak transcription	Spleen	Spleen
32	chr17:17307800-17309600	Weak transcription	Lung	lung
33	chr17:17307800-17309800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
34	chr17:17307800-17309800	Enhancers	Primary T killer memory cells from peripheral blood	blood
35	chr17:17307800-17310400	Enhancers	Primary T helper cells PMA-I stimulated	--
36	chr17:17307800-17310400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
37	chr17:17307800-17311800	Weak transcription	Primary monocytes fromperipheralblood	blood
38	chr17:17307800-17313000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr17:17308000-17310400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
40	chr17:17308000-17310600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
41	chr17:17308000-17310800	Enhancers	Primary T cells from cord blood	blood
42	chr17:17308000-17310800	Enhancers	Primary T helper cells fromperipheralblood	blood
43	chr17:17308000-17311000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
44	chr17:17308000-17311600	Weak transcription	HUVEC	blood vessel
45	chr17:17308000-17313400	Weak transcription	Brain Substantia Nigra	brain
46	chr17:17308000-17313600	Weak transcription	Fetal Brain Male	brain
47	chr17:17308000-17314400	Enhancers	Fetal Thymus	thymus
48	chr17:17308000-17322200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr17:17308200-17310600	Enhancers	Primary T helper naive cells from peripheral blood	blood
50	chr17:17308200-17310600	Enhancers	Primary T helper naive cells fromperipheralblood	blood

The 2.0 version of rSNPBase

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