Variant report

Variant	nsv1060122
Chromosome Location	chr19:19814678-19879575
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:689)
CpG islands
(count:1100)
Chromatin interactive
region (count:28)
LncRNA
region (count:23)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:689 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:19843833-19844345	HepG2	liver:	n/a	n/a
2	ATF3	chr19:19852066-19852400	K562	blood:	n/a	chr19:19852091-19852105
3	BHLHE40	chr19:19849881-19850182	K562	blood:	n/a	n/a
4	BHLHE40	chr19:19844032-19844325	HepG2	liver:	n/a	n/a
5	BHLHE40	chr19:19861740-19861820	K562	blood:	n/a	chr19:19861759-19861768 chr19:19861759-19861768
6	BRCA1	chr19:19844290-19844296	GM12878	blood:	n/a	n/a
7	BRCA1	chr19:19843919-19843953	H1-hESC	embryonic stem cell:	n/a	n/a
8	BRCA1	chr19:19843820-19844003	HepG2	liver:	n/a	n/a
9	CBX3	chr19:19830634-19830946	K562	blood:	n/a	n/a
10	CBX3	chr19:19822096-19823012	K562	blood:	n/a	n/a
11	CBX3	chr19:19822080-19822914	K562	blood:	n/a	n/a
12	CBX3	chr19:19823445-19823679	K562	blood:	n/a	n/a
13	CBX3	chr19:19823175-19823828	K562	blood:	n/a	n/a
14	CBX3	chr19:19843634-19844502	K562	blood:	n/a	n/a
15	CBX3	chr19:19843830-19844294	K562	blood:	n/a	n/a
16	CCNT2	chr19:19843473-19844046	K562	blood:	n/a	n/a
17	CEBPB	chr19:19844043-19844322	K562	blood:	n/a	chr19:19844208-19844219
18	CEBPB	chr19:19843788-19844387	K562	blood:	n/a	chr19:19844208-19844219
19	CEBPB	chr19:19815694-19816114	HepG2	liver:	n/a	n/a
20	CEBPB	chr19:19843738-19844413	IMR90	lung:	n/a	chr19:19844208-19844219
21	CEBPB	chr19:19844005-19844463	ECC-1	luminal epithelium:	n/a	chr19:19844208-19844219
22	CEBPB	chr19:19843639-19844439	A549	lung:	n/a	chr19:19844208-19844219
23	CEBPB	chr19:19843735-19844413	HepG2	liver:	n/a	chr19:19844208-19844219
24	CEBPB	chr19:19860802-19860934	K562	blood:	n/a	chr19:19860889-19860898 chr19:19860887-19860900 chr19:19860889-19860898 chr19:19860889-19860898 chr19:19860889-19860898
25	CEBPB	chr19:19844027-19844344	HepG2	liver:	n/a	chr19:19844208-19844219
26	CEBPB	chr19:19843750-19844404	HepG2	liver:	n/a	chr19:19844208-19844219
27	CEBPB	chr19:19843752-19844410	H1-hESC	embryonic stem cell:	n/a	chr19:19844208-19844219
28	CEBPB	chr19:19843892-19844478	MCF-7	breast:	n/a	chr19:19844208-19844219
29	CEBPB	chr19:19843710-19844435	Hela-S3	cervix:	n/a	chr19:19844208-19844219
30	CEBPB	chr19:19844104-19844330	HepG2	liver:	n/a	chr19:19844208-19844219
31	CEBPB	chr19:19843736-19844405	K562	blood:	n/a	chr19:19844208-19844219
32	CEBPB	chr19:19843702-19844415	MCF-7	breast:	n/a	chr19:19844208-19844219
33	CEBPB	chr19:19843675-19844422	ECC-1	luminal epithelium:	n/a	chr19:19844208-19844219
34	CEBPB	chr19:19860725-19860953	HepG2	liver:	n/a	chr19:19860889-19860898 chr19:19860887-19860900 chr19:19860889-19860898 chr19:19860889-19860898 chr19:19860889-19860898
35	CEBPB	chr19:19843999-19844329	A549	lung:	n/a	chr19:19844208-19844219
36	CEBPB	chr19:19843792-19844404	A549	lung:	n/a	chr19:19844208-19844219
37	CEBPD	chr19:19843710-19844307	HepG2	liver:	n/a	n/a
38	CEBPD	chr19:19844052-19844327	HepG2	liver:	n/a	n/a
39	CHD2	chr19:19843771-19844259	H1-hESC	embryonic stem cell:	n/a	n/a
40	CHD2	chr19:19843803-19844001	HepG2	liver:	n/a	n/a
41	CHD2	chr19:19843820-19844082	K562	blood:	n/a	n/a
42	CREB1	chr19:19843852-19844126	A549	lung:	n/a	n/a
43	CTCF	chr19:19856926-19857015	GM12891	blood:	n/a	n/a
44	CTCF	chr19:19843526-19843600	Pancreas_OC	pancreas:	n/a	n/a
45	CTCF	chr19:19843520-19843670	GM12874	blood:	n/a	n/a
46	CTCF	chr19:19843480-19843630	HepG2	liver:	n/a	n/a
47	CTCF	chr19:19843420-19843570	HBMEC	blood vessel:	n/a	n/a
48	CTCF	chr19:19843470-19843626	MCF-7	breast:	n/a	n/a
49	CTCF	chr19:19843525-19843565	GM20000	blood:	n/a	n/a
50	CTCF	chr19:19856860-19857010	HepG2	liver:	n/a	n/a

(count:1100 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:19844030-19844080	NH-A	brain:	n/a
2	chr19:19843912-19843962	RPTEC	kidney:	n/a
3	chr19:19844030-19844080	NH-A	brain:	n/a
4	chr19:19843912-19843962	RPTEC	kidney:	n/a
5	chr19:19843456-19843506	HRPEpiC	eye:	n/a
6	chr19:19843707-19843757	HIPEpiC	eye:	n/a
7	chr19:19856230-19856280	SKMC	muscle:	n/a
8	chr19:19843560-19843610	AG09309	skin:	n/a
9	chr19:19856230-19856280	GM12891	blood:	n/a
10	chr19:19844076-19844126	HepG2	liver:	n/a
11	chr19:19843882-19843932	BE2_C	brain:	n/a
12	chr19:19843912-19843962	ovcar-3	ovarian:	n/a
13	chr19:19844057-19844107	NB4	blood:	n/a
14	chr19:19843934-19843984	HNPCEpiC	eye:	n/a
15	chr19:19843923-19843973	HCPEpiC	choroid plexus:	n/a
16	chr19:19843912-19843962	NT2-D1	testis:	n/a
17	chr19:19843991-19844041	PrEC	prostate:	n/a
18	chr19:19844278-19844328	AG04450	lung:	fetal
19	chr19:19843456-19843506	RPTEC	kidney:	n/a
20	chr19:19844057-19844107	RPTEC	kidney:	n/a
21	chr19:19844368-19844418	HIPEpiC	eye:	n/a
22	chr19:19856230-19856280	SK-N-SH_RA	brain:	n/a
23	chr19:19841125-19841175	MCF-7	breast:	n/a
24	chr19:19844278-19844328	NHBE	bronchial:	n/a
25	chr19:19856230-19856280	NB4	blood:	n/a
26	chr19:19843456-19843506	ECC-1	luminal epithelium:	n/a
27	chr19:19844076-19844126	K562	blood:	n/a
28	chr19:19822024-19822074	ECC-1	luminal epithelium:	n/a
29	chr19:19822024-19822074	GM12892	blood:	n/a
30	chr19:19855831-19855881	HIPEpiC	eye:	n/a
31	chr19:19822024-19822074	HEK293	kidney:	embryo
32	chr19:19843934-19843984	SK-N-SH	brain:	n/a
33	chr19:19843560-19843610	GM12891	blood:	n/a
34	chr19:19843934-19843984	NT2-D1	testis:	n/a
35	chr19:19856230-19856280	HAEpiC	amniotic membrane:	n/a
36	chr19:19844278-19844328	GM12892	blood:	n/a
37	chr19:19841125-19841175	HRPEpiC	eye:	n/a
38	chr19:19822024-19822074	HCT-116	colon:	n/a
39	chr19:19844030-19844080	HCM	heart:	n/a
40	chr19:19844030-19844080	NB4	blood:	n/a
41	chr19:19843560-19843610	HUVEC	blood vessel:	n/a
42	chr19:19844368-19844418	HEK293	kidney:	embryo
43	chr19:19844076-19844126	HNPCEpiC	eye:	n/a
44	chr19:19822024-19822074	HCPEpiC	choroid plexus:	n/a
45	chr19:19856230-19856280	HL-60	blood:	n/a
46	chr19:19843923-19843973	HPAEpiC	pulmonary alveolar:	n/a
47	chr19:19844224-19844274	NT2-D1	testis:	n/a
48	chr19:19844278-19844328	PrEC	prostate:	n/a
49	chr19:19844076-19844126	MCF10A-Er-Src	breast:	n/a
50	chr19:19843882-19843932	PANC-1	pancreas:	n/a

(count:28 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:19828998..19830532-chr19:20011609..20013262,2	MCF-7	breast:
2	chr19:19626852..19628495-chr19:19842334..19845203,2	MCF-7	breast:
3	chr19:19853777..19855300-chr19:19860531..19862733,2	K562	blood:
4	chr19:19857732..19859328-chr19:19976906..19978604,2	MCF-7	breast:
5	chr19:19841771..19844188-chr19:19847201..19851046,3	MCF-7	breast:
6	chr19:19842192..19843794-chr19:19857515..19860071,2	K562	blood:
7	chr19:19772378..19774383-chr19:19858493..19860458,2	K562	blood:
8	chr19:19825299..19827793-chr19:19827916..19829892,2	K562	blood:
9	chr19:19842402..19846588-chr19:19867933..19871933,3	MCF-7	breast:
10	chr19:19844232..19845828-chr19:19861726..19863362,2	MCF-7	breast:
11	chr19:19842192..19843794-chr19:19857515..19860071,2	K562	blood:
12	chr19:19773005..19774535-chr19:19843985..19845654,2	K562	blood:
13	chr19:19844232..19845828-chr19:19861726..19863362,2	MCF-7	breast:
14	chr19:19858129..19859838-chr19:19860115..19862862,2	K562	blood:
15	chr19:19825299..19827793-chr19:19827916..19829892,2	K562	blood:
16	chr19:19814568..19817544-chr19:19975321..19978730,3	MCF-7	breast:
17	chr19:19857908..19860504-chr19:19872011..19873705,2	K562	blood:
18	chr19:19772622..19775616-chr19:19842700..19844547,2	MCF-7	breast:
19	chr19:19843963..19845573-chr19:19852096..19854779,2	MCF-7	breast:
20	chr19:19837998..19841957-chr19:19842344..19844108,3	MCF-7	breast:
21	chr19:19773494..19775880-chr19:19854600..19857474,2	MCF-7	breast:
22	chr19:19772731..19775725-chr19:19841970..19845590,5	MCF-7	breast:
23	chr19:19843963..19845573-chr19:19852096..19854779,2	MCF-7	breast:
24	chr19:19857908..19860504-chr19:19872011..19873705,2	K562	blood:
25	chr19:19843487..19845582-chr19:19856344..19858979,2	MCF-7	breast:
26	chr19:19869687..19871477-chr19:19882175..19885147,2	MCF-7	breast:
27	chr19:19861019..19863618-chr19:19865280..19868048,2	K562	blood:
28	chr19:19814581..19818356-chr19:19819384..19821651,3	K562	blood:

(count:23 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF506-1	chr19:19871967-19872230	ENSG00000266904.1
2	lnc-ZNF506-1	chr19:19868175-19869355	ENSG00000228642
3	lnc-ZNF506-1	chr19:19873347-19873455	NONHSAT063584
4	lnc-ZNF506-1	chr19:19873347-19873455	ENSG00000266904.1
5	lnc-ZNF506-1	chr19:19873347-19873455	ENSG00000228642
6	lnc-ZNF506-1	chr19:19873347-19873455	ENSG00000266904.1
7	lnc-ZNF506-1	chr19:19872013-19872230	ENSG00000266904.1
8	lnc-ZNF506-1	chr19:19873347-19873455	ENSG00000228642
9	lnc-ZNF506-1	chr19:19868952-19869355	ENSG00000266904.1
10	lnc-ZNF506-1	chr19:19867185-19867496	ENSG00000228642
11	lnc-ZNF506-1	chr19:19868610-19869355	NONHSAT063584
12	lnc-ZNF506-1	chr19:19872066-19872230	ENSG00000266904.1
13	lnc-ZNF506-1	chr19:19873347-19873455	ENSG00000266904.1
14	lnc-ZNF506-1	chr19:19872018-19872230	NONHSAT063584
15	lnc-ZNF506-1	chr19:19867916-19869355	ENSG00000228642
16	lnc-ZNF506-1	chr19:19873347-19873455	ENSG00000266904.1
17	lnc-ZNF101-4	chr19:19821997-19822576	NONHSAT063083
18	lnc-ZNF506-1	chr19:19869205-19869355	ENSG00000266904.1
19	lnc-ZNF506-1	chr19:19868592-19869355	ENSG00000266904.1
20	lnc-ZNF14-2	chr19:19855285-19856046	NONHSAT063177
21	lnc-ZNF101-4	chr19:19822661-19822691	NONHSAT063083
22	lnc-ZNF506-1	chr19:19872135-19872230	ENSG00000266904.1
23	lnc-ZNF506-1	chr19:19872066-19872230	ENSG00000228642

No data

Variant related genes	Relation type
ENSG00000270402	TF binding region
ENSG00000267693	TF binding region
ZNF14	TF binding region
ENSG00000271499	TF binding region
ENSG00000271283	TF binding region
ENSG00000270402	CpG island
ENSG00000267693	CpG island
ZNF14	CpG island
ENSG00000271499	CpG island
ENSG00000271283	CpG island
ENSG00000271499	chromatin interactions
ENSG00000256771	chromatin interactions
ENSG00000258674	chromatin interactions
ENSG00000105726	chromatin interactions
ENSG00000184635	chromatin interactions
ENSG00000270402	chromatin interactions
ENSG00000186010	chromatin interactions
ENSG00000267268	chromatin interactions
ENSG00000105708	chromatin interactions
SON	miRNA target sites
MYCN	miRNA target sites
PDRG1	miRNA target sites
CGN	miRNA target sites

Extended variants
information (count: 2554 )
Associated
traits (count: 51 )

Variant overlapped rSNPs/rCNVs (count:2554 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs543952770	chr19:19814727-19814728	Weak transcription ZNF genes & repeats Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs557376278	chr19:19814752-19814753	Weak transcription ZNF genes & repeats Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs77995635	chr19:19814754-19814755	Weak transcription ZNF genes & repeats Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs66522026	chr19:19814798-19814799	Weak transcription ZNF genes & repeats Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs559840766	chr19:19814807-19814808	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs144868634	chr19:19814881-19814882	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs542051616	chr19:19814914-19814915	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs561960170	chr19:19814996-19814997	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs530980786	chr19:19815024-19815025	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs550264426	chr19:19815069-19815070	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs34984663	chr19:19815074-19815075	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs369231183	chr19:19815100-19815101	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs546573834	chr19:19815136-19815137	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs566683705	chr19:19815137-19815138	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs187441465	chr19:19815162-19815163	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs192343900	chr19:19815164-19815165	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs111448027	chr19:19815171-19815172	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs552386698	chr19:19815189-19815190	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs557212807	chr19:19815236-19815237	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs74181153	chr19:19815281-19815282	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs545904836	chr19:19815305-19815306	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs553314943	chr19:19815316-19815317	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs184729563	chr19:19815333-19815334	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs542138801	chr19:19815474-19815475	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs377373081	chr19:19815538-19815539	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs141717370	chr19:19815601-19815602	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs544783753	chr19:19815608-19815609	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs369684760	chr19:19815624-19815625	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs12980676	chr19:19815628-19815629	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs147996165	chr19:19815641-19815642	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs546315699	chr19:19815664-19815665	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs34009809	chr19:19815677-19815678	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs529256154	chr19:19815678-19815679	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs201492284	chr19:19815685-19815686	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs566481383	chr19:19815689-19815690	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs11668827	chr19:19815690-19815691	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs549305447	chr19:19815700-19815701	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs569161904	chr19:19815750-19815751	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs78136042	chr19:19815753-19815754	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs557911694	chr19:19815758-19815759	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs570890600	chr19:19815803-19815804	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs141676437	chr19:19815878-19815879	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs553164474	chr19:19815895-19815896	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs572905926	chr19:19815917-19815918	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs535418645	chr19:19815927-19815928	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs191232991	chr19:19815930-19815931	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs547870628	chr19:19815948-19815949	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs184607248	chr19:19815953-19815954	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs73924839	chr19:19815976-19815977	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs57119263	chr19:19816085-19816086	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:51)

Disease	PMID	Source
Prostate cancer	16573809	CNVD
Lung cancer	17297452	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Medulloblastoma	16783165	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Basal cell lymphoma	21115979	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21364760	CNVD
Acute monocytic leukemia	16498392	CNVD
Lung cancer	18438408	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Cancer	17440070	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
early-passage human iPS cells	21368824	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Nasopharyngeal cancer	20548289	CNVD
Amyotrophic lateral sclerosis	20685689	CNVD

Chromatin state (count:967 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:19791200-19816800	Weak transcription	Right Ventricle	heart
2	chr19:19808800-19818200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr19:19810800-19830800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
4	chr19:19811000-19816400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
5	chr19:19811600-19833200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr19:19812000-19818000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr19:19812200-19815600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr19:19812200-19815600	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr19:19812200-19815800	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr19:19812400-19815800	Weak transcription	Dnd41	blood
11	chr19:19812600-19815800	Weak transcription	Brain Cingulate Gyrus	brain
12	chr19:19813000-19815200	Strong transcription	Brain Inferior Temporal Lobe	brain
13	chr19:19813000-19816200	ZNF genes & repeats	Fetal Intestine Small	intestine
14	chr19:19813200-19815800	Weak transcription	Fetal Heart	heart
15	chr19:19813400-19833000	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
16	chr19:19813600-19815200	Weak transcription	Psoas Muscle	Psoas
17	chr19:19813600-19815800	Strong transcription	Brain Hippocampus Middle	brain
18	chr19:19813800-19814800	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr19:19813800-19815600	Strong transcription	Stomach Smooth Muscle	stomach
20	chr19:19814000-19815000	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
21	chr19:19814200-19816000	ZNF genes & repeats	Left Ventricle	heart
22	chr19:19814200-19833200	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr19:19814400-19816200	ZNF genes & repeats	Ovary	ovary
24	chr19:19814400-19816400	ZNF genes & repeats	Fetal Lung	lung
25	chr19:19814400-19816400	ZNF genes & repeats	Placenta	Placenta
26	chr19:19814400-19821200	ZNF genes & repeats	Aorta	Aorta
27	chr19:19814400-19822000	ZNF genes & repeats	Fetal Stomach	stomach
28	chr19:19814600-19814800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
29	chr19:19814600-19815000	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr19:19814600-19815000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr19:19814600-19815000	Strong transcription	Cortex derived primary cultured neurospheres	brain
32	chr19:19814600-19815000	Strong transcription	Pancreas	Pancrea
33	chr19:19814600-19816000	ZNF genes & repeats	Fetal Intestine Large	intestine
34	chr19:19814600-19816000	ZNF genes & repeats	Lung	lung
35	chr19:19814600-19816000	ZNF genes & repeats	Thymus	Thymus
36	chr19:19814600-19816600	ZNF genes & repeats	Duodenum Mucosa	Duodenum
37	chr19:19814600-19816600	ZNF genes & repeats	Gastric	stomach
38	chr19:19814600-19817200	ZNF genes & repeats	Fetal Adrenal Gland	Adrenal Gland
39	chr19:19814600-19818600	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
40	chr19:19814600-19831400	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
41	chr19:19814600-19831400	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr19:19814600-19833000	ZNF genes & repeats	Adipose Nuclei	Adipose
43	chr19:19814800-19815000	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr19:19814800-19816000	ZNF genes & repeats	Fetal Muscle Trunk	muscle
45	chr19:19814800-19818000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
46	chr19:19814800-19831400	ZNF genes & repeats	Fetal Brain Female	brain
47	chr19:19815000-19816200	ZNF genes & repeats	Pancreas	Pancrea
48	chr19:19815000-19817600	Weak transcription	Cortex derived primary cultured neurospheres	brain
49	chr19:19815200-19815400	Strong transcription	Psoas Muscle	Psoas
50	chr19:19815200-19815800	Weak transcription	Brain Inferior Temporal Lobe	brain

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