Variant report

Variant	nsv1060400
Chromosome Location	chr19:53316328-53362705
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:729)
CpG islands
(count:1038)
Chromatin interactive
region (count:17)
LncRNA
region (count:22)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:729 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr19:53324738-53324945	H1-hESC	embryonic stem cell:	n/a	n/a
2	BACH1	chr19:53360719-53361014	H1-hESC	embryonic stem cell:	n/a	n/a
3	BATF	chr19:53336721-53337013	GM12878	blood:	n/a	chr19:53336917-53336927 chr19:53336913-53336923 chr19:53336723-53336732 chr19:53336898-53336906
4	BATF	chr19:53336688-53337003	GM12878	blood:	n/a	chr19:53336917-53336927 chr19:53336913-53336923 chr19:53336723-53336732 chr19:53336898-53336906
5	BCL11A	chr19:53360679-53360916	GM12878	blood:	n/a	chr19:53360828-53360837
6	BCL11A	chr19:53362420-53362624	GM12878	blood:	n/a	n/a
7	BHLHE40	chr19:53324867-53324898	K562	blood:	n/a	n/a
8	BHLHE40	chr19:53360687-53361035	GM12878	blood:	n/a	chr19:53360820-53360836 chr19:53360998-53361014
9	CBX3	chr19:53360595-53361343	K562	blood:	n/a	n/a
10	CBX3	chr19:53324640-53325255	K562	blood:	n/a	n/a
11	CCNT2	chr19:53361004-53361276	K562	blood:	n/a	n/a
12	CEBPB	chr19:53329163-53329370	H1-hESC	embryonic stem cell:	n/a	n/a
13	CEBPB	chr19:53345961-53346152	A549	lung:	n/a	chr19:53346019-53346030
14	CEBPB	chr19:53329098-53329325	K562	blood:	n/a	n/a
15	CEBPB	chr19:53329012-53329572	K562	blood:	n/a	n/a
16	CEBPB	chr19:53328995-53329384	K562	blood:	n/a	n/a
17	CEBPB	chr19:53345865-53346133	HepG2	liver:	n/a	chr19:53346019-53346030
18	CEBPB	chr19:53319087-53319167	HepG2	liver:	n/a	chr19:53319119-53319130
19	CEBPB	chr19:53329092-53329271	MCF-7	breast:	n/a	n/a
20	CEBPB	chr19:53345864-53346169	IMR90	lung:	n/a	chr19:53346019-53346030
21	CEBPD	chr19:53329085-53329417	K562	blood:	n/a	n/a
22	CEBPD	chr19:53360693-53360926	HepG2	liver:	n/a	n/a
23	CHD2	chr19:53360719-53360909	K562	blood:	n/a	n/a
24	CHD2	chr19:53360829-53361263	GM12878	blood:	n/a	n/a
25	CTCF	chr19:53360887-53361019	GM12891	blood:	n/a	chr19:53360990-53361003
26	CTCF	chr19:53361020-53361170	HMF	breast:	n/a	n/a
27	CTCF	chr19:53360794-53360918	Kidney_OC	kidney:	n/a	n/a
28	CTCF	chr19:53361020-53361170	Hela-S3	cervix:	n/a	n/a
29	CTCF	chr19:53360920-53361070	HMEC	breast:	n/a	chr19:53360990-53361003
30	CTCF	chr19:53324761-53325046	K562	blood:	n/a	chr19:53325004-53325017
31	CTCF	chr19:53360980-53361130	HCM	heart:	n/a	chr19:53360990-53361003
32	CTCF	chr19:53324957-53324996	GM13977	blood:	n/a	n/a
33	CTCF	chr19:53324980-53325130	SAEC	small airway:	n/a	chr19:53325004-53325017
34	CTCF	chr19:53361000-53361150	HVMF	connective:	n/a	n/a
35	CTCF	chr19:53324899-53325011	GM13976	blood:	n/a	n/a
36	CTCF	chr19:53360774-53361155	K562	blood:	n/a	chr19:53360990-53361003
37	CTCF	chr19:53361020-53361170	AG10803	skin:	n/a	n/a
38	CTCF	chr19:53361020-53361170	BJ	skin:	n/a	n/a
39	CTCF	chr19:53324949-53325037	LNCaP	prostate:	n/a	chr19:53325004-53325017
40	CTCF	chr19:53324957-53325018	GM12892	blood:	n/a	chr19:53325004-53325017
41	CTCF	chr19:53324459-53324474	GM19238	blood:	n/a	n/a
42	CTCF	chr19:53324891-53325076	GM19238	blood:	n/a	chr19:53325004-53325017
43	CTCF	chr19:53325000-53325150	HCPEpiC	choroid plexus:	n/a	chr19:53325004-53325017
44	CTCF	chr19:53361000-53361150	HRPEpiC	eye:	n/a	n/a
45	CTCF	chr19:53361040-53361190	GM12873	blood:	n/a	n/a
46	CTCF	chr19:53360924-53361043	Kidney_OC	kidney:	n/a	chr19:53360990-53361003
47	CTCF	chr19:53328020-53328170	HCPEpiC	choroid plexus:	n/a	n/a
48	CTCF	chr19:53333123-53333177	Kidney_OC	kidney:	n/a	n/a
49	CTCF	chr19:53360980-53361130	HCT-116	colon:	n/a	chr19:53360990-53361003
50	CTCF	chr19:53361000-53361150	SK-N-SH_RA	brain:	n/a	n/a

(count:1038 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:53360728-53360778	HCT-116	colon:	n/a
2	chr19:53360728-53360778	HCT-116	colon:	n/a
3	chr19:53325913-53325963	NHDF-neo	bronchial:	n/a
4	chr19:53324198-53324248	BE2_C	brain:	n/a
5	chr19:53360213-53360263	LNCaP	prostate:	n/a
6	chr19:53325104-53325154	HRCEpiC	kidney:	n/a
7	chr19:53359733-53359783	MCF-7	breast:	n/a
8	chr19:53357134-53357184	SK-N-MC	brain:	n/a
9	chr19:53325104-53325154	Hepatocyte	liver:	n/a
10	chr19:53344366-53344416	HNPCEpiC	eye:	n/a
11	chr19:53357134-53357184	AoSMC	blood vessel:	n/a
12	chr19:53324198-53324248	HEK293	kidney:	embryo
13	chr19:53344366-53344416	AG04450	lung:	fetal
14	chr19:53361448-53361498	ovcar-3	ovarian:	n/a
15	chr19:53325913-53325963	Hepatocyte	liver:	n/a
16	chr19:53359733-53359783	HRPEpiC	eye:	n/a
17	chr19:53324198-53324248	Jurkat	blood:	n/a
18	chr19:53326091-53326141	GM12891	blood:	n/a
19	chr19:53344366-53344416	SK-N-SH_RA	brain:	n/a
20	chr19:53324278-53324328	HRE	kidney:	n/a
21	chr19:53325104-53325154	Hela-S3	cervix:	n/a
22	chr19:53326091-53326141	Hepatocyte	liver:	n/a
23	chr19:53325080-53325130	Jurkat	blood:	n/a
24	chr19:53325104-53325154	RPTEC	kidney:	n/a
25	chr19:53361066-53361116	IMR90	lung:	fetal
26	chr19:53361164-53361214	AG04450	lung:	fetal
27	chr19:53360728-53360778	ovcar-3	ovarian:	n/a
28	chr19:53326219-53326269	AG04449	skin:	fetal
29	chr19:53325104-53325154	GM12892	blood:	n/a
30	chr19:53360728-53360778	AG04449	skin:	fetal
31	chr19:53325913-53325963	U87	brain:	n/a
32	chr19:53324732-53324782	T-47D	breast:	n/a
33	chr19:53342580-53342630	GM12891	blood:	n/a
34	chr19:53360728-53360778	AG09319	gingival:	n/a
35	chr19:53344366-53344416	HPAEpiC	pulmonary alveolar:	n/a
36	chr19:53326091-53326141	AG10803	skin:	n/a
37	chr19:53360213-53360263	ovcar-3	ovarian:	n/a
38	chr19:53325913-53325963	HAEpiC	amniotic membrane:	n/a
39	chr19:53361066-53361116	GM12891	blood:	n/a
40	chr19:53326091-53326141	GM12878	blood:	n/a
41	chr19:53324278-53324328	Hela-S3	cervix:	n/a
42	chr19:53326091-53326141	NB4	blood:	n/a
43	chr19:53325104-53325154	SAEC	small airway:	n/a
44	chr19:53360728-53360778	U87	brain:	n/a
45	chr19:53359733-53359783	GM06990	blood:	n/a
46	chr19:53326091-53326141	AG04449	skin:	fetal
47	chr19:53342580-53342630	NB4	blood:	n/a
48	chr19:53325080-53325130	ovcar-3	ovarian:	n/a
49	chr19:53324278-53324328	HAEpiC	amniotic membrane:	n/a
50	chr19:53360213-53360263	SAEC	small airway:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:53322321..53326212-chr19:53359321..53361245,3	K562	blood:
2	chr19:53322321..53326212-chr19:53359321..53361245,3	K562	blood:
3	chr19:53335113..53339470-chr19:53340101..53344099,5	K562	blood:
4	chr19:53324497..53325251-chr19:53360339..53360857,4	MCF-7	breast:
5	chr19:53357060..53358583-chr19:53400479..53402706,2	MCF-7	breast:
6	chr19:53322321..53326212-chr19:53359240..53361245,4	K562	blood:
7	chr19:53339213..53341134-chr20:46203984..46206130,2	MCF-7	breast:
8	chr19:53359564..53361265-chr19:53424872..53426783,2	MCF-7	breast:
9	chr19:53324392..53324894-chr19:53934932..53935516,2	MCF-7	breast:
10	chr19:53322321..53326212-chr19:53359240..53361245,4	K562	blood:
11	chr19:53193532..53195862-chr19:53359115..53361191,3	K562	blood:
12	chr19:53324497..53325251-chr19:53360339..53360857,4	MCF-7	breast:
13	chr19:53359757..53362433-chr19:53464752..53467349,2	MCF-7	breast:
14	chr19:53338835..53341536-chr19:53343202..53344870,2	K562	blood:
15	chr19:53338835..53341536-chr19:53343202..53344870,2	K562	blood:
16	chr19:53324563..53325122-chr19:53360322..53360852,2	NB4	blood:
17	chr19:53335113..53339470-chr19:53340101..53344099,5	K562	blood:

(count:22 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF468-1	chr19:53341785-53345404	NR_102299
2	lnc-ZNF468-1	chr19:53341785-53345404	NR_102301
3	lnc-ZNF468-1	chr19:53360825-53360902	NR_102301
4	lnc-ZNF468-3	chr19:53321197-53321281	NONHSAT067589
5	lnc-ZNF468-1	chr19:53357125-53357379	NR_102301
6	lnc-ZNF468-1	chr19:53360825-53360902	NR_102299
7	lnc-ZNF468-1	chr19:53352340-53352466	NR_102301
8	lnc-ZNF468-1	chr19:53357511-53357598	NR_102301
9	lnc-ZNF468-1	chr19:53352340-53352466	NR_102299
10	lnc-ZNF468-3	chr19:53324839-53324886	NONHSAT067588
11	lnc-ZNF468-3	chr19:53317537-53317679	NONHSAT067589
12	lnc-ZNF468-1	chr19:53352340-53352466	NR_102300
13	lnc-ZNF701-2	chr19:53342913-53343520	NONHSAT067585
14	lnc-ZNF468-1	chr19:53357511-53357598	NR_102300
15	lnc-ZNF468-1	chr19:53357511-53357598	NR_102299
16	lnc-ZNF468-3	chr19:53321197-53321284	NONHSAT067588
17	lnc-ZNF468-1	chr19:53348432-53348549	NR_102299
18	lnc-ZNF468-1	chr19:53348432-53348549	NR_102300
19	lnc-ZNF468-1	chr19:53360825-53360902	NR_102300
20	lnc-ZNF468-1	chr19:53357125-53357379	NR_102299
21	lnc-ZNF468-1	chr19:53357125-53357360	NR_102300
22	lnc-ZNF468-1	chr19:53341785-53345404	NR_102300

No data

Variant related genes	Relation type
ZNF28	TF binding region
ZNF468	TF binding region
ZNF28	CpG island
ZNF468	CpG island
ENSG00000213793	chromatin interactions
ENSG00000221874	chromatin interactions
ENSG00000269646	chromatin interactions
ENSG00000182986	chromatin interactions
ENSG00000204604	chromatin interactions
ENSG00000167766	chromatin interactions
ENSG00000241015	chromatin interactions
ENSG00000180257	chromatin interactions
ENSG00000160336	chromatin interactions
ENSG00000198538	chromatin interactions

Extended variants
information (count: 2605 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:2605 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs531975509	chr19:53316332-53316333	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs192673494	chr19:53316432-53316433	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs113833929	chr19:53316441-53316442	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs536106006	chr19:53316450-53316451	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs71183837	chr19:53316522-53316523	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs73592007	chr19:53316527-53316528	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs183514547	chr19:53316619-53316620	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs368676795	chr19:53316625-53316626	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs73592009	chr19:53316652-53316653	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs553423173	chr19:53316653-53316654	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs577994845	chr19:53316663-53316664	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs148351994	chr19:53316665-53316666	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs557355183	chr19:53316730-53316731	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs576025560	chr19:53316807-53316808	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs543318418	chr19:53316808-53316809	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs531502861	chr19:53316813-53316814	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs561355775	chr19:53316846-53316847	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs573373378	chr19:53316904-53316905	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs189421648	chr19:53316995-53316996	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs114093200	chr19:53317000-53317001	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs10426358	chr19:53317001-53317002	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs79092076	chr19:53317017-53317018	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs181718463	chr19:53317037-53317038	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs73067558	chr19:53317049-53317050	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs114158003	chr19:53317066-53317067	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs548450983	chr19:53317107-53317108	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs566590214	chr19:53317171-53317172	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs141561536	chr19:53317182-53317183	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs552042346	chr19:53317190-53317191	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs112820410	chr19:53317215-53317216	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs539103238	chr19:53317218-53317219	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs150909102	chr19:53317221-53317222	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs28760449	chr19:53317230-53317231	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs536985082	chr19:53317231-53317232	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs527589439	chr19:53317281-53317282	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs73592011	chr19:53317337-53317338	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs112288210	chr19:53317352-53317353	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs117804155	chr19:53317355-53317356	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs565302314	chr19:53317366-53317367	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs115459740	chr19:53317372-53317373	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs7260398	chr19:53317395-53317396	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs539548246	chr19:53317431-53317432	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs546264350	chr19:53317478-53317479	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs143986009	chr19:53317490-53317491	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs555299498	chr19:53317515-53317516	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs185893409	chr19:53317516-53317517	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs7246446	chr19:53317522-53317523	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs7245433	chr19:53317536-53317537	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs371962529	chr19:53317542-53317543	Weak transcription Strong transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
50	rs541086716	chr19:53317544-53317545	Weak transcription Strong transcription ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Cancer	20164920	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD
Adrenocortical carcinoma	18281524	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:1678 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53296200-53324000	Weak transcription	Fetal Brain Male	brain
2	chr19:53306000-53324000	Weak transcription	Colon Smooth Muscle	Colon
3	chr19:53306600-53324000	Weak transcription	Psoas Muscle	Psoas
4	chr19:53308000-53319600	Weak transcription	HUVEC	blood vessel
5	chr19:53308200-53319200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr19:53308200-53320200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr19:53308200-53324000	Weak transcription	Fetal Kidney	kidney
8	chr19:53311000-53323600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr19:53311200-53320200	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr19:53311400-53317600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
11	chr19:53311400-53323600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
12	chr19:53311400-53324000	Weak transcription	NHDF-Ad	bronchial
13	chr19:53311600-53317600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
14	chr19:53313400-53320800	Weak transcription	Brain Hippocampus Middle	brain
15	chr19:53313600-53324000	Weak transcription	Fetal Lung	lung
16	chr19:53313600-53324000	Weak transcription	Right Ventricle	heart
17	chr19:53313600-53324200	Weak transcription	Brain Substantia Nigra	brain
18	chr19:53313800-53316600	Weak transcription	Primary T cells from cord blood	blood
19	chr19:53313800-53317000	Weak transcription	Placenta	Placenta
20	chr19:53313800-53317000	Weak transcription	Rectal Mucosa Donor 31	rectum
21	chr19:53313800-53317200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr19:53313800-53317200	Weak transcription	Left Ventricle	heart
23	chr19:53313800-53317200	Weak transcription	Stomach Smooth Muscle	stomach
24	chr19:53313800-53317400	Weak transcription	Gastric	stomach
25	chr19:53313800-53317400	Weak transcription	Ovary	ovary
26	chr19:53313800-53317400	Weak transcription	Spleen	Spleen
27	chr19:53313800-53318000	Weak transcription	Osteobl	bone
28	chr19:53313800-53318400	Weak transcription	Muscle Satellite Cultured Cells	--
29	chr19:53313800-53320200	Weak transcription	Brain Inferior Temporal Lobe	brain
30	chr19:53313800-53320200	Weak transcription	Rectal Smooth Muscle	rectum
31	chr19:53313800-53321000	Weak transcription	NH-A	brain
32	chr19:53313800-53323600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
33	chr19:53313800-53323800	Weak transcription	Stomach Mucosa	stomach
34	chr19:53313800-53324000	Weak transcription	Brain Angular Gyrus	brain
35	chr19:53313800-53324000	Weak transcription	Brain Cingulate Gyrus	brain
36	chr19:53313800-53324000	Weak transcription	HSMM	muscle
37	chr19:53313800-53324000	Weak transcription	NHLF	lung
38	chr19:53313800-53324200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr19:53314000-53316400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
40	chr19:53314000-53316400	Weak transcription	Primary B cells from cord blood	blood
41	chr19:53314000-53316400	Weak transcription	Primary B cells from peripheral blood	blood
42	chr19:53314000-53316400	Weak transcription	Primary hematopoietic stem cells	blood
43	chr19:53314000-53316400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
44	chr19:53314000-53316400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr19:53314000-53316400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr19:53314000-53316400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
47	chr19:53314000-53316400	Weak transcription	Liver	Liver
48	chr19:53314000-53316600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr19:53314000-53316600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr19:53314000-53316600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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