Variant report

Variant rs577994845
Chromosome Location chr19:53316663-53316664
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53296200-53324000 Weak transcription Fetal Brain Male brain
2 chr19:53306000-53324000 Weak transcription Colon Smooth Muscle Colon
3 chr19:53306600-53324000 Weak transcription Psoas Muscle Psoas
4 chr19:53308000-53319600 Weak transcription HUVEC blood vessel
5 chr19:53308200-53319200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:53308200-53320200 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr19:53308200-53324000 Weak transcription Fetal Kidney kidney
8 chr19:53311000-53323600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr19:53311200-53320200 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr19:53311400-53317600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr19:53311400-53323600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr19:53311400-53324000 Weak transcription NHDF-Ad bronchial
13 chr19:53311600-53317600 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr19:53313400-53320800 Weak transcription Brain Hippocampus Middle brain
15 chr19:53313600-53324000 Weak transcription Fetal Lung lung
16 chr19:53313600-53324000 Weak transcription Right Ventricle heart
17 chr19:53313600-53324200 Weak transcription Brain Substantia Nigra brain
18 chr19:53313800-53317000 Weak transcription Placenta Placenta
19 chr19:53313800-53317000 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr19:53313800-53317200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr19:53313800-53317200 Weak transcription Left Ventricle heart
22 chr19:53313800-53317200 Weak transcription Stomach Smooth Muscle stomach
23 chr19:53313800-53317400 Weak transcription Gastric stomach
24 chr19:53313800-53317400 Weak transcription Ovary ovary
25 chr19:53313800-53317400 Weak transcription Spleen Spleen
26 chr19:53313800-53318000 Weak transcription Osteobl bone
27 chr19:53313800-53318400 Weak transcription Muscle Satellite Cultured Cells --
28 chr19:53313800-53320200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr19:53313800-53320200 Weak transcription Rectal Smooth Muscle rectum
30 chr19:53313800-53321000 Weak transcription NH-A brain
31 chr19:53313800-53323600 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr19:53313800-53323800 Weak transcription Stomach Mucosa stomach
33 chr19:53313800-53324000 Weak transcription Brain Angular Gyrus brain
34 chr19:53313800-53324000 Weak transcription Brain Cingulate Gyrus brain
35 chr19:53313800-53324000 Weak transcription HSMM muscle
36 chr19:53313800-53324000 Weak transcription NHLF lung
37 chr19:53313800-53324200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr19:53314000-53316800 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr19:53314000-53316800 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr19:53314000-53316800 Weak transcription Adipose Nuclei Adipose
41 chr19:53314000-53317000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr19:53314000-53317000 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr19:53314000-53317000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr19:53314000-53317000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr19:53314000-53317000 Weak transcription Primary T cells fromperipheralblood blood
46 chr19:53314000-53317000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr19:53314000-53317000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr19:53314000-53317000 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr19:53314000-53317200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr19:53314000-53317200 Weak transcription Fetal Muscle Trunk muscle

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