No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs4503848 |
chr17:33671156-33671157 |
Enhancers Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs572836302 |
chr17:33671160-33671161 |
Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs149459277 |
chr17:33671220-33671221 |
Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs565038349 |
chr17:33671242-33671243 |
Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs192692381 |
chr17:33671245-33671246 |
Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs144097596 |
chr17:33671362-33671363 |
Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs537603419 |
chr17:33671394-33671395 |
Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs560726626 |
chr17:33671398-33671399 |
Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs4338833 |
chr17:33671414-33671415 |
Bivalent Enhancer Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
10 |
rs4074590 |
chr17:33671466-33671467 |
Bivalent Enhancer Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
11 |
rs565743420 |
chr17:33671539-33671540 |
Bivalent Enhancer Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs541481633 |
chr17:33671585-33671586 |
Bivalent Enhancer Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs377294395 |
chr17:33671600-33671601 |
Bivalent Enhancer Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs571750405 |
chr17:33671617-33671618 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs537129648 |
chr17:33671641-33671642 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs557556269 |
chr17:33671654-33671655 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs536720879 |
chr17:33671694-33671695 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs117076037 |
chr17:33671714-33671715 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs4074591 |
chr17:33671740-33671741 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
20 |
rs553658033 |
chr17:33671786-33671787 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs184825735 |
chr17:33671812-33671813 |
Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs573238703 |
chr17:33671824-33671825 |
Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs189206027 |
chr17:33671834-33671835 |
Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs545029848 |
chr17:33671848-33671849 |
Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs192012408 |
chr17:33671887-33671888 |
Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs575325257 |
chr17:33671917-33671918 |
Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs543943373 |
chr17:33671973-33671974 |
Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs560764490 |
chr17:33672012-33672013 |
Enhancers Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs546867934 |
chr17:33672013-33672014 |
Enhancers Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs529796071 |
chr17:33672020-33672021 |
Enhancers Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs148687584 |
chr17:33672045-33672046 |
Enhancers Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs373139340 |
chr17:33672060-33672061 |
Enhancers Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs539359099 |
chr17:33672084-33672085 |
Enhancers Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs4073837 |
chr17:33672085-33672086 |
Enhancers Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
35 |
rs115023750 |
chr17:33672289-33672290 |
Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs3902986 |
chr17:33672296-33672297 |
Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
37 |
rs571524058 |
chr17:33672302-33672303 |
Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs531053897 |
chr17:33672324-33672325 |
Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs184861304 |
chr17:33672341-33672342 |
Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs189658498 |
chr17:33672408-33672409 |
Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs142244005 |
chr17:33672482-33672483 |
Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs146719012 |
chr17:33672544-33672545 |
Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs372969838 |
chr17:33672586-33672587 |
Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs12938381 |
chr17:33672632-33672633 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs567188664 |
chr17:33672642-33672643 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs538940979 |
chr17:33672656-33672657 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs558544710 |
chr17:33672705-33672706 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs11080339 |
chr17:33672706-33672707 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
49 |
rs544304345 |
chr17:33672708-33672709 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs35716910 |
chr17:33672724-33672725 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|