Variant report

Variant	nsv2488
Chromosome Location	chr19:40593818-40631406
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:652)
CpG islands
(count:551)
Chromatin interactive
region (count:20)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:652 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:40626861-40627110	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:40625311-40625897	HepG2	liver:	n/a	n/a
3	ARID3A	chr19:40596685-40597009	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:40622030-40622278	HepG2	liver:	n/a	n/a
5	ATF1	chr19:40596443-40597000	K562	blood:	n/a	n/a
6	ATF2	chr19:40596328-40597044	GM12878	blood:	n/a	n/a
7	BACH1	chr19:40596189-40596351	K562	blood:	n/a	n/a
8	BACH1	chr19:40596420-40596933	H1-hESC	embryonic stem cell:	n/a	n/a
9	BATF	chr19:40620473-40620618	GM12878	blood:	n/a	n/a
10	BCL11A	chr19:40620461-40620637	GM12878	blood:	n/a	n/a
11	BCL11A	chr19:40620479-40620630	GM12878	blood:	n/a	n/a
12	BCL3	chr19:40595876-40597326	A549	lung:	n/a	chr19:40596837-40596846
13	BCLAF1	chr19:40596296-40597148	GM12878	blood:	n/a	chr19:40596837-40596846
14	BHLHE40	chr19:40596409-40596845	GM12878	blood:	n/a	n/a
15	BHLHE40	chr19:40622725-40623015	HepG2	liver:	n/a	n/a
16	BHLHE40	chr19:40596342-40597113	K562	blood:	n/a	n/a
17	BRCA1	chr19:40596434-40596918	HepG2	liver:	n/a	n/a
18	CBX3	chr19:40596114-40597175	K562	blood:	n/a	n/a
19	CCNT2	chr19:40596414-40596798	K562	blood:	n/a	n/a
20	CEBPB	chr19:40625344-40625716	HepG2	liver:	n/a	chr19:40625553-40625564 chr19:40625554-40625565
21	CEBPB	chr19:40617460-40617745	A549	lung:	n/a	n/a
22	CEBPB	chr19:40626888-40627090	HepG2	liver:	n/a	n/a
23	CEBPB	chr19:40618776-40618890	A549	lung:	n/a	n/a
24	CEBPB	chr19:40617539-40617731	HepG2	liver:	n/a	n/a
25	CEBPB	chr19:40625435-40625600	HepG2	liver:	n/a	chr19:40625553-40625564 chr19:40625554-40625565
26	CEBPB	chr19:40625426-40625697	A549	lung:	n/a	chr19:40625553-40625564 chr19:40625554-40625565
27	CEBPB	chr19:40617532-40617579	IMR90	lung:	n/a	n/a
28	CEBPB	chr19:40625324-40625756	HepG2	liver:	n/a	chr19:40625553-40625564 chr19:40625554-40625565
29	CEBPB	chr19:40626852-40627072	K562	blood:	n/a	n/a
30	CEBPB	chr19:40596654-40596813	H1-hESC	embryonic stem cell:	n/a	n/a
31	CEBPB	chr19:40594873-40595077	A549	lung:	n/a	n/a
32	CEBPD	chr19:40596826-40597070	HepG2	liver:	n/a	n/a
33	CEBPD	chr19:40596466-40597070	HepG2	liver:	n/a	n/a
34	CHD1	chr19:40596363-40596919	GM12878	blood:	n/a	n/a
35	CHD1	chr19:40596064-40596962	H1-hESC	embryonic stem cell:	n/a	n/a
36	CHD2	chr19:40596514-40596993	Hela-S3	cervix:	n/a	n/a
37	CHD2	chr19:40596735-40597005	K562	blood:	n/a	n/a
38	CHD2	chr19:40596422-40597038	HepG2	liver:	n/a	n/a
39	CHD2	chr19:40596424-40597095	GM12878	blood:	n/a	n/a
40	CHD2	chr19:40596723-40597007	H1-hESC	embryonic stem cell:	n/a	n/a
41	CREB1	chr19:40596226-40597244	GM12878	blood:	n/a	n/a
42	CREB1	chr19:40596392-40596982	A549	lung:	n/a	n/a
43	CREB1	chr19:40596141-40597181	HepG2	liver:	n/a	n/a
44	CREB1	chr19:40596274-40597088	K562	blood:	n/a	n/a
45	CREB1	chr19:40596258-40597196	GM12878	blood:	n/a	n/a
46	CREB1	chr19:40596299-40597085	H1-hESC	embryonic stem cell:	n/a	n/a
47	CREB1	chr19:40596186-40597118	HepG2	liver:	n/a	n/a
48	CREB1	chr19:40596406-40597033	H1-hESC	embryonic stem cell:	n/a	n/a
49	CREB1	chr19:40596277-40597048	A549	lung:	n/a	n/a
50	CREB1	chr19:40596484-40597030	ECC-1	luminal epithelium:	n/a	n/a

(count:551 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:40596853-40596903	HCM	heart:	n/a
2	chr19:40596541-40596591	HIPEpiC	eye:	n/a
3	chr19:40596853-40596903	HCM	heart:	n/a
4	chr19:40596541-40596591	HIPEpiC	eye:	n/a
5	chr19:40596998-40597048	SK-N-SH	brain:	n/a
6	chr19:40596855-40596905	HCF	heart:	n/a
7	chr19:40597369-40597419	HNPCEpiC	eye:	n/a
8	chr19:40597369-40597419	ovcar-3	ovarian:	n/a
9	chr19:40596853-40596903	HRPEpiC	eye:	n/a
10	chr19:40597063-40597113	BJ	skin:	n/a
11	chr19:40596855-40596905	NHDF-neo	bronchial:	n/a
12	chr19:40596726-40596776	GM19239	blood:	n/a
13	chr19:40596726-40596776	ECC-1	luminal epithelium:	n/a
14	chr19:40596726-40596776	SK-N-SH_RA	brain:	n/a
15	chr19:40596998-40597048	HepG2	liver:	n/a
16	chr19:40597063-40597113	A549	lung:	n/a
17	chr19:40596855-40596905	HMEC	breast:	n/a
18	chr19:40596541-40596591	NHDF-neo	bronchial:	n/a
19	chr19:40596855-40596905	SK-N-SH	brain:	n/a
20	chr19:40596516-40596566	GM12891	blood:	n/a
21	chr19:40596853-40596903	Hepatocyte	liver:	n/a
22	chr19:40596998-40597048	LNCaP	prostate:	n/a
23	chr19:40596516-40596566	BE2_C	brain:	n/a
24	chr19:40596541-40596591	BJ	skin:	n/a
25	chr19:40597369-40597419	AG10803	skin:	n/a
26	chr19:40596516-40596566	AG09319	gingival:	n/a
27	chr19:40596726-40596776	K562	blood:	n/a
28	chr19:40596541-40596591	SKMC	muscle:	n/a
29	chr19:40596516-40596566	HRPEpiC	eye:	n/a
30	chr19:40596853-40596903	AoSMC	blood vessel:	n/a
31	chr19:40597369-40597419	GM12891	blood:	n/a
32	chr19:40596855-40596905	CMK	blood:	n/a
33	chr19:40596726-40596776	HCM	heart:	n/a
34	chr19:40596965-40597015	ECC-1	luminal epithelium:	n/a
35	chr19:40596541-40596591	HCM	heart:	n/a
36	chr19:40596516-40596566	A549	lung:	n/a
37	chr19:40596853-40596903	NT2-D1	testis:	n/a
38	chr19:40596516-40596566	SK-N-SH_RA	brain:	n/a
39	chr19:40596853-40596903	GM19239	blood:	n/a
40	chr19:40596998-40597048	HIPEpiC	eye:	n/a
41	chr19:40597369-40597419	LNCaP	prostate:	n/a
42	chr19:40596855-40596905	SKMC	muscle:	n/a
43	chr19:40596853-40596903	HEK293	kidney:	embryo
44	chr19:40597063-40597113	LNCaP	prostate:	n/a
45	chr19:40596726-40596776	GM12878	blood:	n/a
46	chr19:40596855-40596905	GM19239	blood:	n/a
47	chr19:40596853-40596903	HCT-116	colon:	n/a
48	chr19:40596516-40596566	NH-A	brain:	n/a
49	chr19:40596855-40596905	Caco-2	colon:	n/a
50	chr19:40596516-40596566	HepG2	liver:	n/a

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:40609064..40610843-chr19:40611318..40613002,2	K562	blood:
2	chr19:40627418..40629816-chr19:40630760..40633172,4	K562	blood:
3	chr19:40598367..40600693-chr19:40603198..40605174,2	K562	blood:
4	chr19:40596109..40598926-chr19:40610764..40612715,2	K562	blood:
5	chr10:22791038..22791735-chr19:40625635..40626306,2	MCF-7	breast:
6	chr19:40501950..40503610-chr19:40595158..40598072,2	K562	blood:
7	chr19:40595283..40597006-chr19:40608799..40611391,2	MCF-7	breast:
8	chr19:40475093..40477810-chr19:40625856..40627495,2	K562	blood:
9	chr19:40598367..40600693-chr19:40603198..40605174,2	K562	blood:
10	chr19:40593483..40595649-chr19:40598012..40600965,2	K562	blood:
11	chr19:40593483..40595649-chr19:40598012..40600965,2	K562	blood:
12	chr19:40586085..40589151-chr19:40591998..40594903,3	K562	blood:
13	chr18:12883600..12884285-chr19:40596090..40596674,2	HCT-116	colon:
14	chr10:69644271..69644878-chr19:40596856..40597376,2	NB4	blood:
15	chr19:40558581..40561504-chr19:40593898..40595454,2	K562	blood:
16	chr13:91999624..92000352-chr19:40596463..40597085,2	Hela-S3	cervix:
17	chr19:40609064..40610843-chr19:40611318..40613002,2	K562	blood:
18	chr19:40595751..40597908-chr19:40599874..40602107,2	K562	blood:
19	chr19:40560174..40562165-chr19:40594393..40596020,2	MCF-7	breast:
20	chr19:40591307..40594004-chr19:40595229..40597538,5	K562	blood:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF546-3	chr19:40596661-40600313	ENSG00000269296.1
2	lnc-ZNF780A-2	chr19:40616331-40616560	NONHSAT066350
3	lnc-ZNF780A-2	chr19:40615699-40615844	NONHSAT066350
4	lnc-ZNF546-3	chr19:40599221-40599582	ucscGeneNc_uc002nzf_1
5	lnc-ZNF780A-3	chr19:40627218-40628075	NONHSAT066351
6	lnc-ZNF546-3	chr19:40593904-40594024	ucscGeneNc_uc002nzf_1

No data

Variant related genes	Relation type
ENSG00000269749	TF binding region
VN1R96P	TF binding region
ENSG00000269296	TF binding region
ZNF780A	TF binding region
ENSG00000269749	CpG island
VN1R96P	CpG island
ENSG00000269296	CpG island
ZNF780A	CpG island
ENSG00000269749	chromatin interactions
ENSG00000197782	chromatin interactions
ENSG00000230086	chromatin interactions
ENSG00000187187	chromatin interactions
ENSG00000096717	chromatin interactions
ENSG00000269296	chromatin interactions
ENSG00000128000	chromatin interactions
ENSG00000175354	chromatin interactions
ENSG00000013275	chromatin interactions
ENSG00000215417	chromatin interactions

Extended variants
information (count: 852 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:852 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs192752888	chr19:40593836-40593837	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs73549833	chr19:40593858-40593859	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs73549835	chr19:40593865-40593866	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs542801596	chr19:40593911-40593912	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
5	rs560774901	chr19:40593934-40593935	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
6	rs150546325	chr19:40593947-40593948	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
7	rs138359515	chr19:40594001-40594002	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
8	rs562514022	chr19:40594067-40594068	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs564197105	chr19:40594070-40594071	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs533364539	chr19:40594140-40594141	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs201708613	chr19:40594166-40594167	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs200066032	chr19:40594224-40594225	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs374450534	chr19:40594251-40594252	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs536702909	chr19:40594252-40594253	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs373463817	chr19:40594284-40594285	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs567151536	chr19:40594323-40594324	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs528003565	chr19:40594327-40594328	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs186815	chr19:40594335-40594336	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs75444307	chr19:40594357-40594358	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs556294095	chr19:40594437-40594438	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs573749868	chr19:40594467-40594468	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs78257382	chr19:40594496-40594497	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs538622869	chr19:40594534-40594535	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs73549836	chr19:40594545-40594546	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs559580716	chr19:40594548-40594549	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs572285567	chr19:40594589-40594590	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs183813906	chr19:40594619-40594620	Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs533623198	chr19:40594628-40594629	Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs75100686	chr19:40594634-40594635	Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs186816	chr19:40594660-40594661	Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs144374316	chr19:40594661-40594662	Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs377083439	chr19:40594702-40594703	Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs189157209	chr19:40594754-40594755	Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs192891064	chr19:40594826-40594827	Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs13344062	chr19:40594848-40594849	Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs527951230	chr19:40594850-40594851	Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs549719241	chr19:40594909-40594910	Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs140188259	chr19:40594939-40594940	Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs184684427	chr19:40595013-40595014	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs550434466	chr19:40595025-40595026	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs106082	chr19:40595028-40595029	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs143934472	chr19:40595036-40595037	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs553715030	chr19:40595087-40595088	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs189101661	chr19:40595090-40595091	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs536520280	chr19:40595120-40595121	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs548642839	chr19:40595186-40595187	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs1926934	chr19:40595220-40595221	Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs1926933	chr19:40595281-40595282	Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs1926932	chr19:40595290-40595291	Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs558358774	chr19:40595294-40595295	Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Ovarian neoplasms	16753589	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Lung cancer	21569311	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	19029149	CNVD
Breast cancer	20409316	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Renal cell carcinoma	18765545	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Genital abnormality	22378287	CNVD
Hypospadia	22378287	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Astrocytoma	22246337	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:561 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:40581800-40595600	Weak transcription	Stomach Mucosa	stomach
2	chr19:40583000-40595400	Weak transcription	NHLF	lung
3	chr19:40583200-40595400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr19:40583200-40595400	Weak transcription	Lung	lung
5	chr19:40583200-40595400	Weak transcription	Psoas Muscle	Psoas
6	chr19:40583200-40595400	Weak transcription	NH-A	brain
7	chr19:40583200-40596000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr19:40583400-40595400	Weak transcription	Small Intestine	intestine
9	chr19:40583800-40595400	Weak transcription	Right Ventricle	heart
10	chr19:40586600-40594800	Weak transcription	Fetal Heart	heart
11	chr19:40586600-40595400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr19:40586600-40595400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr19:40586800-40594600	Weak transcription	Fetal Brain Male	brain
14	chr19:40586800-40595400	Weak transcription	Hela-S3	cervix
15	chr19:40587200-40595400	Weak transcription	Placenta	Placenta
16	chr19:40588800-40594800	Weak transcription	Fetal Kidney	kidney
17	chr19:40589200-40594800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr19:40589200-40595400	Weak transcription	HSMMtube	muscle
19	chr19:40589400-40594200	Weak transcription	Primary hematopoietic stem cells	blood
20	chr19:40589400-40594600	Weak transcription	Colon Smooth Muscle	Colon
21	chr19:40589400-40595200	Weak transcription	HMEC	breast
22	chr19:40589400-40595400	Weak transcription	HSMM	muscle
23	chr19:40589400-40595600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr19:40589400-40595600	Weak transcription	Osteobl	bone
25	chr19:40589600-40594200	Weak transcription	Pancreatic Islets	Pancreatic Islet
26	chr19:40589600-40595000	Weak transcription	K562	blood
27	chr19:40589600-40595000	Weak transcription	NHDF-Ad	bronchial
28	chr19:40589600-40595200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr19:40589600-40595400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
30	chr19:40589600-40595800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
31	chr19:40589600-40595800	Weak transcription	Placenta Amnion	Placenta Amnion
32	chr19:40589800-40595400	Weak transcription	H1 Cell Line	embryonic stem cell
33	chr19:40589800-40595400	Weak transcription	Rectal Mucosa Donor 31	rectum
34	chr19:40590200-40595000	Weak transcription	Muscle Satellite Cultured Cells	--
35	chr19:40590200-40595200	Weak transcription	Brain Substantia Nigra	brain
36	chr19:40590400-40594000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr19:40590400-40594600	Weak transcription	Fetal Brain Female	brain
38	chr19:40590400-40595400	Weak transcription	Brain Inferior Temporal Lobe	brain
39	chr19:40590400-40595400	Weak transcription	Rectal Smooth Muscle	rectum
40	chr19:40590600-40594600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr19:40590600-40594800	Weak transcription	NHEK	skin
42	chr19:40590600-40595200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr19:40590600-40595200	Weak transcription	Brain Anterior Caudate	brain
44	chr19:40590600-40595400	Weak transcription	HUES48 Cell Line	embryonic stem cell
45	chr19:40590800-40594600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr19:40590800-40594600	Enhancers	HepG2	liver
47	chr19:40590800-40595000	Weak transcription	Skeletal Muscle Female	skeletal muscle
48	chr19:40590800-40595200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
49	chr19:40590800-40595200	Weak transcription	Fetal Lung	lung
50	chr19:40590800-40595400	Weak transcription	HUES6 Cell Line	embryonic stem cell

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