The 2.0 version of rSNPBase

Variant report

Variant rs13344062
Chromosome Location chr19:40594848-40594849
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40581800-40595600 Weak transcription Stomach Mucosa stomach
2 chr19:40583000-40595400 Weak transcription NHLF lung
3 chr19:40583200-40595400 Weak transcription H9 Cell Line embryonic stem cell
4 chr19:40583200-40595400 Weak transcription Lung lung
5 chr19:40583200-40595400 Weak transcription Psoas Muscle Psoas
6 chr19:40583200-40595400 Weak transcription NH-A brain
7 chr19:40583200-40596000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr19:40583400-40595400 Weak transcription Small Intestine intestine
9 chr19:40583800-40595400 Weak transcription Right Ventricle heart
10 chr19:40586600-40595400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr19:40586600-40595400 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr19:40586800-40595400 Weak transcription Hela-S3 cervix
13 chr19:40587200-40595400 Weak transcription Placenta Placenta
14 chr19:40589200-40595400 Weak transcription HSMMtube muscle
15 chr19:40589400-40595200 Weak transcription HMEC breast
16 chr19:40589400-40595400 Weak transcription HSMM muscle
17 chr19:40589400-40595600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr19:40589400-40595600 Weak transcription Osteobl bone
19 chr19:40589600-40595000 Weak transcription K562 blood
20 chr19:40589600-40595000 Weak transcription NHDF-Ad bronchial
21 chr19:40589600-40595200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr19:40589600-40595400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr19:40589600-40595800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr19:40589600-40595800 Weak transcription Placenta Amnion Placenta Amnion
25 chr19:40589800-40595400 Weak transcription H1 Cell Line embryonic stem cell
26 chr19:40589800-40595400 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr19:40590200-40595000 Weak transcription Muscle Satellite Cultured Cells --
28 chr19:40590200-40595200 Weak transcription Brain Substantia Nigra brain
29 chr19:40590400-40595400 Weak transcription Brain Inferior Temporal Lobe brain
30 chr19:40590400-40595400 Weak transcription Rectal Smooth Muscle rectum
31 chr19:40590600-40595200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr19:40590600-40595200 Weak transcription Brain Anterior Caudate brain
33 chr19:40590600-40595400 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr19:40590800-40595000 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr19:40590800-40595200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr19:40590800-40595200 Weak transcription Fetal Lung lung
37 chr19:40590800-40595400 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr19:40590800-40595400 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr19:40590800-40595400 Weak transcription Primary B cells from peripheral blood blood
40 chr19:40590800-40595400 Weak transcription HUVEC blood vessel
41 chr19:40591000-40595000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr19:40591000-40595000 Weak transcription Brain Hippocampus Middle brain
43 chr19:40591000-40595200 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr19:40591000-40595200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr19:40591000-40595200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr19:40591000-40595200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr19:40591000-40595400 Weak transcription Esophagus oesophagus
48 chr19:40591000-40595400 Weak transcription Fetal Muscle Leg muscle
49 chr19:40591000-40595400 Weak transcription Ovary ovary
50 chr19:40591000-40595400 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015