The 2.0 version of rSNPBase

Variant report

Variant rs3930885
Chromosome Location chr19:40506928-40506929
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40503600-40507000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:40503600-40507400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr19:40503600-40511800 Weak transcription Ovary ovary
4 chr19:40503600-40511800 Weak transcription Spleen Spleen
5 chr19:40503600-40512000 Weak transcription Esophagus oesophagus
6 chr19:40503600-40512400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr19:40503600-40513000 Weak transcription Placenta Placenta
8 chr19:40503600-40514000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr19:40503600-40519200 Weak transcription Small Intestine intestine
10 chr19:40503800-40511000 Weak transcription Right Atrium heart
11 chr19:40503800-40511400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr19:40503800-40512000 Weak transcription Primary monocytes fromperipheralblood blood
13 chr19:40503800-40512000 Weak transcription Lung lung
14 chr19:40503800-40512200 Weak transcription Aorta Aorta
15 chr19:40503800-40512200 Weak transcription Gastric stomach
16 chr19:40503800-40512400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr19:40503800-40512400 Weak transcription Brain Angular Gyrus brain
18 chr19:40503800-40512800 Weak transcription Brain Germinal Matrix brain
19 chr19:40503800-40513000 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr19:40503800-40513000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr19:40503800-40513200 Weak transcription Fetal Intestine Large intestine
22 chr19:40503800-40513400 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr19:40503800-40513400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr19:40503800-40513400 Weak transcription Brain Cingulate Gyrus brain
25 chr19:40503800-40513800 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr19:40503800-40513800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr19:40503800-40513800 Weak transcription Fetal Stomach stomach
28 chr19:40503800-40514000 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr19:40503800-40514000 Weak transcription Rectal Smooth Muscle rectum
30 chr19:40503800-40514400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr19:40503800-40514600 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr19:40503800-40514600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr19:40503800-40516000 Weak transcription Fetal Intestine Small intestine
34 chr19:40504000-40510000 Weak transcription Stomach Mucosa stomach
35 chr19:40504000-40511000 Weak transcription Fetal Heart heart
36 chr19:40504000-40511200 Weak transcription Right Ventricle heart
37 chr19:40504000-40511200 Weak transcription K562 blood
38 chr19:40504000-40511400 Weak transcription Brain Hippocampus Middle brain
39 chr19:40504000-40511800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr19:40504000-40512000 Weak transcription Primary B cells from cord blood blood
41 chr19:40504000-40512000 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr19:40504000-40512000 Weak transcription Brain Inferior Temporal Lobe brain
43 chr19:40504000-40512000 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr19:40504000-40512200 Weak transcription Primary B cells from peripheral blood blood
45 chr19:40504000-40512200 Weak transcription Primary T cells fromperipheralblood blood
46 chr19:40504000-40512200 Weak transcription Primary hematopoietic stem cells blood
47 chr19:40504000-40512200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr19:40504000-40512200 Weak transcription Adipose Nuclei Adipose
49 chr19:40504000-40512200 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr19:40504000-40512200 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015