The 2.0 version of rSNPBase

Variant report

Variant rs234310
Chromosome Location chr19:40518766-40518767
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40503600-40519200 Weak transcription Small Intestine intestine
2 chr19:40504000-40519600 Weak transcription Fetal Brain Male brain
3 chr19:40504000-40519600 Weak transcription Hela-S3 cervix
4 chr19:40504000-40533800 Weak transcription Placenta Amnion Placenta Amnion
5 chr19:40511600-40522000 ZNF genes & repeats A549 lung
6 chr19:40512000-40519200 Strong transcription Brain Inferior Temporal Lobe brain
7 chr19:40512000-40527200 ZNF genes & repeats Liver Liver
8 chr19:40512600-40519600 Weak transcription Colonic Mucosa Colon
9 chr19:40513400-40518800 Strong transcription Brain Cingulate Gyrus brain
10 chr19:40513400-40521800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr19:40513600-40522200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr19:40514000-40523000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr19:40514800-40519600 Weak transcription Right Ventricle heart
14 chr19:40515000-40519000 Weak transcription HepG2 liver
15 chr19:40515000-40519400 Weak transcription Fetal Intestine Large intestine
16 chr19:40515200-40519200 Weak transcription HSMMtube muscle
17 chr19:40515200-40519600 Weak transcription Rectal Smooth Muscle rectum
18 chr19:40515200-40519800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr19:40515200-40519800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr19:40515200-40519800 Weak transcription Pancreas Pancrea
21 chr19:40515200-40519800 Weak transcription Thymus Thymus
22 chr19:40515400-40519000 Weak transcription Muscle Satellite Cultured Cells --
23 chr19:40515400-40519000 Weak transcription NHDF-Ad bronchial
24 chr19:40515400-40519600 Weak transcription K562 blood
25 chr19:40515400-40521600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
26 chr19:40515600-40519600 Weak transcription Fetal Heart heart
27 chr19:40515600-40520000 Weak transcription Brain Germinal Matrix brain
28 chr19:40515600-40522200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
29 chr19:40516000-40519200 Weak transcription Fetal Kidney kidney
30 chr19:40516000-40519400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr19:40516000-40519400 Weak transcription HSMM muscle
32 chr19:40516000-40519400 Weak transcription Osteobl bone
33 chr19:40516000-40519600 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr19:40516000-40519600 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr19:40516000-40519600 Strong transcription Dnd41 blood
36 chr19:40516200-40519200 Weak transcription Fetal Brain Female brain
37 chr19:40516200-40519600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr19:40516200-40519800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr19:40516600-40519000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr19:40516800-40520400 Weak transcription Fetal Stomach stomach
41 chr19:40517400-40521400 ZNF genes & repeats Primary hematopoietic stem cells blood
42 chr19:40517400-40522800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr19:40517600-40518800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr19:40517600-40521200 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
45 chr19:40517600-40521600 ZNF genes & repeats Fetal Muscle Leg muscle
46 chr19:40517600-40521800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
47 chr19:40517600-40521800 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr19:40517600-40522200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
49 chr19:40517600-40522200 ZNF genes & repeats Primary T cells from cord blood blood
50 chr19:40517600-40522200 ZNF genes & repeats Fetal Lung lung

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Last update: Aug 31, 2015