The 2.0 version of rSNPBase

Variant report

Variant rs73543979
Chromosome Location chr19:40458365-40458366
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40450000-40461200 Enhancers Primary T cells fromperipheralblood blood
2 chr19:40450000-40461800 Enhancers Primary T helper cells fromperipheralblood blood
3 chr19:40450400-40458600 Weak transcription Thymus Thymus
4 chr19:40451600-40458800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr19:40453000-40466000 Weak transcription Fetal Intestine Small intestine
6 chr19:40454400-40459200 Enhancers Primary T helper 17 cells PMA-I stimulated --
7 chr19:40454800-40459000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
8 chr19:40454800-40460000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
9 chr19:40455000-40460400 Enhancers Primary T regulatory cells fromperipheralblood blood
10 chr19:40455800-40458400 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
11 chr19:40456000-40460400 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr19:40456400-40459600 Flanking Active TSS Primary B cells from cord blood blood
13 chr19:40457000-40458400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
14 chr19:40457000-40458600 Enhancers Dnd41 blood
15 chr19:40457000-40458600 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
16 chr19:40457200-40458600 Weak transcription Brain Hippocampus Middle brain
17 chr19:40457200-40459400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
18 chr19:40457200-40460200 Enhancers Primary mononuclear cells fromperipheralblood Blood
19 chr19:40457400-40458400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr19:40457400-40458400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr19:40457400-40475600 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr19:40457600-40458400 Flanking Active TSS Primary B cells from peripheral blood blood
23 chr19:40457600-40458400 Flanking Active TSS Fetal Thymus thymus
24 chr19:40457600-40459200 Enhancers GM12878-XiMat blood
25 chr19:40457600-40459400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
26 chr19:40457600-40460000 Enhancers Stomach Mucosa stomach
27 chr19:40457600-40460200 Enhancers Spleen Spleen
28 chr19:40457800-40458400 Enhancers HMEC breast
29 chr19:40457800-40459600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
30 chr19:40458000-40459200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr19:40458000-40460400 Enhancers Primary hematopoietic stem cells blood
32 chr19:40458200-40458400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
33 chr19:40458200-40458400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr19:40458200-40459200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr19:40458200-40460200 Enhancers Lung lung

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Last update: Aug 31, 2015