The 2.0 version of rSNPBase

Variant report

Variant rs372599
Chromosome Location chr19:40453666-40453667
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:40447800-40457000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
2 chr19:40448400-40455600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr19:40448400-40457600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr19:40449200-40457200 Weak transcription Small Intestine intestine
5 chr19:40450000-40461200 Enhancers Primary T cells fromperipheralblood blood
6 chr19:40450000-40461800 Enhancers Primary T helper cells fromperipheralblood blood
7 chr19:40450200-40456600 Enhancers Primary T helper cells PMA-I stimulated --
8 chr19:40450400-40454200 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr19:40450400-40458600 Weak transcription Thymus Thymus
10 chr19:40450600-40457200 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr19:40451200-40454800 Bivalent Enhancer Primary monocytes fromperipheralblood blood
12 chr19:40451400-40453800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr19:40451400-40455000 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr19:40451400-40456600 Weak transcription Fetal Thymus thymus
15 chr19:40451600-40458800 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr19:40452000-40454800 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr19:40452400-40457000 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr19:40452800-40456000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr19:40453000-40453800 Weak transcription Primary B cells from cord blood blood
20 chr19:40453000-40454400 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
21 chr19:40453000-40454800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr19:40453000-40457000 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr19:40453000-40457600 Weak transcription Stomach Mucosa stomach
24 chr19:40453000-40466000 Weak transcription Fetal Intestine Small intestine
25 chr19:40453600-40454600 Enhancers Primary T cells from cord blood blood
26 chr19:40453600-40457600 Enhancers Primary B cells from peripheral blood blood
27 chr19:40453600-40457600 Enhancers Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015